Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atp5s

Gene Name Gene ID Reads Annotation
atp5s ENSDARG00000012072 294 ATP synthase, H+ transporting, mitochondrial F0 complex subunit s [Source:ZFIN;Acc:ZDB-GENE-040426-959]










Genes with expression patterns similar to atp5s

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atp5s ENSDARG00000012072 294 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATP synthase, H+ transporting, mitochondrial F0 complex subunit s [Source:ZFIN;Acc:ZDB-GENE-040426-959]
2. pdf ENSDARG00000013950 293 1.748 - 0.902 - - - - - 0.846 - peptide deformylase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050913-42]
3. BX005085.1 ENSDARG00000089947 230 1.585 - 0.867 - - - - - 0.718 -
4. CYSTM1 CYSTM1 176 1.584 - 0.848 - - - - - 0.736 -
5. ubald1b ENSDARG00000020976 1162 1.55 - 0.734 - - - - - 0.816 - UBA-like domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-446]
6. emc4 ENSDARG00000039268 553 1.538 0.719 0.819 - - - - - - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
7. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.527 - 0.806 - - - - 0.721 - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
8. tmem163a ENSDARG00000079858, ENSDARG00000116870 677 1.5 - - - - - - 0.745 0.755 - transmembrane protein 163a [Source:ZFIN;Acc:ZDB-GENE-081104-429]
9. zgc:109949 ENSDARG00000103413 426 1.486 - - - - - - 0.728 0.758 - zgc:109949 [Source:ZFIN;Acc:ZDB-GENE-050522-166]
10. napgl napgl 39 1.474 - - - - - - 0.744 0.730 -
11. flt4 ENSDARG00000104453 557 0.97 - 0.970 - - - - - - - fms-related tyrosine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-980526-326]
12. snoR38 snoR38 1068 0.963 - 0.963 - - - - - - -
13. esrrd ENSDARG00000015064 291 0.963 - 0.963 - - - - - - - estrogen-related receptor delta [Source:ZFIN;Acc:ZDB-GENE-040616-3]
14. zgc:136474 zgc:136474 658 0.961 - 0.961 - - - - - - -
15. aff4 ENSDARG00000001857 134 0.958 - 0.958 - - - - - - - AF4/FMR2 family, member 4 [Source:ZFIN;Acc:ZDB-GENE-100910-5]
16. gga3 ENSDARG00000103667 675 0.957 - 0.957 - - - - - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
17. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 0.953 - 0.953 - - - - - - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
18. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 0.949 - 0.949 - - - - - - - l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
19. serpine2 ENSDARG00000029353 2274 0.947 - 0.947 - - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
20. wnt7aa ENSDARG00000044827 645 0.943 - 0.943 - - - - - - - wingless-type MMTV integration site family, member 7Aa [Source:ZFIN;Acc:ZDB-GENE-051129-1]
21. TM2D2 ENSDARG00000035515 561 0.939 - 0.939 - - - - - - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
22. zgc:64002_1 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 257 0.937 - 0.937 - - - - - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
23. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 0.936 - 0.936 - - - - - - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
24. si:ch73-18b11.2 ENSDARG00000094978 148 0.934 - 0.934 - - - - - - - si:ch73-18b11.2 [Source:ZFIN;Acc:ZDB-GENE-070912-333]
25. CABZ01066717.1 CABZ01066717.1 351 0.934 - 0.934 - - - - - - -
26. lcn15 ENSDARG00000067851 140 0.934 - 0.934 - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
27. TMEM71 TMEM71 696 0.933 - 0.933 - - - - - - -
28. fam63b 484 0.931 - 0.931 - - - - - - - family with sequence similarity 63, member B
29. casp2 ENSDARG00000062052 559 0.93 - 0.930 - - - - - - - caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
30. GLTPD2 ENSDARG00000067889, ENSDARG00000114510 320 0.928 - 0.928 - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
31. usp12a ENSDARG00000078109 490 0.925 - 0.925 - - - - - - - ubiquitin specific peptidase 12a [Source:ZFIN;Acc:ZDB-GENE-060228-3]
32. cmasb 499 0.922 - 0.922 - - - - - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
33. phyhiplb ENSDARG00000070498 348 0.921 - 0.921 - - - - - - - phytanoyl-CoA 2-hydroxylase interacting protein-like b [Source:ZFIN;Acc:ZDB-GENE-040927-27]
34. atp11c ENSDARG00000036442, ENSDARG00000116165 336 0.921 - 0.921 - - - - - - - ATPase phospholipid transporting 11C [Source:ZFIN;Acc:ZDB-GENE-030616-51]
35. lrrc6 ENSDARG00000053318 146 0.918 - 0.918 - - - - - - - leucine rich repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-040827-2]
36. CR376783.1 ENSDARG00000074235 259 0.918 - 0.918 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
37. ms4a17a.9 ENSDARG00000094854 933 0.917 - 0.917 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.9 [Source:ZFIN;Acc:ZDB-GENE-050320-79]
38. SEC16B ENSDARG00000099554 411 0.916 - 0.916 - - - - - - - SEC16 homolog B, endoplasmic reticulum export factor [Source:ZFIN;Acc:ZDB-GENE-050208-274]
39. mettl1 ENSDARG00000076518 366 0.915 - 0.915 - - - - - - - methyltransferase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-24]
40. csad ENSDARG00000026348 1461 0.914 - 0.914 - - - - - - - cysteine sulfinic acid decarboxylase [Source:ZFIN;Acc:ZDB-GENE-041114-36]
41. casp3b ENSDARG00000055045 54 0.913 - 0.913 - - - - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
42. c8a ENSDARG00000039516 495 0.912 - 0.912 - - - - - - - complement component 8, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040801-239]
43. si:dkey-114b16.4 si:dkey-114b16.4 35 0.91 - 0.910 - - - - - - -
44. pddc1 pddc1 257 0.91 - 0.910 - - - - - - -
45. efna5a ENSDARG00000089790 1007 0.909 - 0.909 - - - - - - - ephrin-A5a [Source:ZFIN;Acc:ZDB-GENE-001128-1]
46. prkar1ab ENSDARG00000101755 555 0.909 - 0.909 - - - - - - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b [Source:ZFIN;Acc:ZDB-GENE-050417-238]
47. rab40c ENSDARG00000061208 1072 0.908 - 0.908 - - - - - - - RAB40c, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030515-1]
48. cyp2v1 ENSDARG00000018485 694 0.908 - 0.908 - - - - - - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
49. GEMIN7 ENSDARG00000041011 529 0.907 - 0.907 - - - - - - - gem (nuclear organelle) associated protein 7 [Source:ZFIN;Acc:ZDB-GENE-120409-2]
50. si:dkeyp-13a3.10 ENSDARG00000092225 1054 0.907 - 0.907 - - - - - - - si:dkeyp-13a3.10 [Source:ZFIN;Acc:ZDB-GENE-070912-636]
51. SLC38A9 ENSDARG00000032769 35 0.907 - 0.907 - - - - - - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
52. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.907 - 0.907 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
53. MAP3K2 ENSDARG00000062884 34 0.906 - 0.906 - - - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
54. C12H10orf2 C12H10orf2 245 0.906 - 0.906 - - - - - - -
55. cflara ENSDARG00000055966 464 0.906 - 0.906 - - - - - - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
56. CABZ01003826.1_1 CABZ01003826.1_1 1154 0.906 - 0.906 - - - - - - -
57. ckap5 ENSDARG00000102674 5068 0.905 - 0.905 - - - - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
58. zgc:113385 zgc:113385 297 0.905 - 0.905 - - - - - - -
59. tial1 ENSDARG00000009525 1856 0.905 - 0.905 - - - - - - - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
60. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 0.904 - 0.904 - - - - - - - gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
61. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.904 - 0.904 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
62. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.904 - 0.904 - - - - - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
63. kremen1 ENSDARG00000062579 190 0.904 - 0.904 - - - - - - - kringle containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070705-262]
64. mfsd11 ENSDARG00000102828 1043 0.903 - 0.903 - - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
65. gpam ENSDARG00000074169 488 0.902 - 0.902 - - - - - - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-101026-1]
66. zgc:109744 ENSDARG00000070800 262 0.902 - 0.902 - - - - - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
67. tmem8a ENSDARG00000032795 677 0.902 - 0.902 - - - - - - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
68. cyp2aa1 ENSDARG00000099003 297 0.902 - 0.902 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
69. fam105bb fam105bb 1253 0.902 - 0.902 - - - - - - -
70. dram2b ENSDARG00000044241 503 0.902 - 0.902 - - - - - - - DNA-damage regulated autophagy modulator 2b [Source:ZFIN;Acc:ZDB-GENE-040625-141]
71. ppapdc2 ppapdc2 67 0.901 - 0.901 - - - - - - -
72. U3_5 U3_5 67 0.901 - 0.901 - - - - - - -
73. si:dkey-228i19.34 si:dkey-228i19.34 43 0.901 - 0.901 - - - - - - -
74. CR388047.3 ENSDARG00000117023 89 0.901 - 0.901 - - - - - - -
75. si:ch211-39a7.1 ENSDARG00000037427 31 0.901 - 0.901 - - - - - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
76. ZP2 ZP2 14 0.901 - 0.901 - - - - - - -
77. CABZ01109624.1 CABZ01109624.1 25 0.901 - 0.901 - - - - - - -
78. si:ch1073-155h21.1 ENSDARG00000007582 137 0.9 - 0.900 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
79. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.899 - 0.899 - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
80. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 0.899 - 0.899 - - - - - - - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
81. kcnj1a.4 ENSDARG00000090635 356 0.899 - 0.899 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050420-186]
82. si:ch211-105d18.6 si:ch211-105d18.6 59 0.899 - 0.899 - - - - - - -
83. BX005256.1 ENSDARG00000106112 467 0.899 - 0.899 - - - - - - - phospholipase A2 inhibitor CNF-like [Source:NCBI gene;Acc:110438015]
84. smdt1 smdt1 99 0.899 - 0.899 - - - - - - -
85. zgc:165582 ENSDARG00000074362 198 0.898 - 0.898 - - - - - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
86. usp45 ENSDARG00000075013 227 0.897 - 0.897 - - - - - - - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
87. acad11 ENSDARG00000045411 350 0.897 - 0.897 - - - - - - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
88. CT573322.1 CT573322.1 38 0.897 - 0.897 - - - - - - -
89. UBASH3B UBASH3B 292 0.896 - 0.896 - - - - - - -
90. si:dkey-154p10.3 ENSDARG00000068366 153 0.896 - 0.896 - - - - - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
91. SLC27A2 SLC27A2 436 0.896 - 0.896 - - - - - - -
92. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 0.896 - 0.896 - - - - - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
93. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.895 - 0.895 - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
94. rnls ENSDARG00000012453 338 0.895 - 0.895 - - - - - - - renalase, FAD-dependent amine oxidase [Source:ZFIN;Acc:ZDB-GENE-040718-351]
95. stx5a ENSDARG00000025033, ENSDARG00000112598 380 0.895 - 0.895 - - - - - - - syntaxin 5A [Source:ZFIN;Acc:ZDB-GENE-040718-18]
96. foxn4 ENSDARG00000010591 2332 0.894 - 0.894 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
97. jkamp ENSDARG00000028581 893 0.894 - 0.894 - - - - - - - jnk1/mapk8 associated membrane protein [Source:ZFIN;Acc:ZDB-GENE-040718-382]
98. pgap2 ENSDARG00000044596 60 0.893 - 0.893 - - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
99. si:ch211-215d8.2 ENSDARG00000093233 784 0.893 - 0.893 - - - - - - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
100. kcnk13a ENSDARG00000008212 136 0.892 - 0.892 - - - - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]

There are 640 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA