Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atp5g3b

Gene Name Gene ID Reads Annotation
atp5g3b 69028 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1










Genes with expression patterns similar to atp5g3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atp5g3b 69028 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c3 (subunit 9) b, transcript variant X1
2. rps10 ENSDARG00000034897 71395 1.738 0.870 - - - - - - - 0.868 ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040426-1481]
3. rpl31 ENSDARG00000053365 55475 1.713 0.892 - - - - - - - 0.821 ribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
4. ebna1bp2 ENSDARG00000054980 4621 1.649 0.764 0.885 - - - - - - - EBNA1 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6989]
5. sipa1l2 ENSDARG00000061640 4545 1.649 - 0.852 - - - - 0.797 - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
6. pgam2 ENSDARG00000057571 23387 1.584 0.720 - - - - - - - 0.864 phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
7. zgc:92066 ENSDARG00000031776, ENSDARG00000116586 12826 1.577 - 0.790 - - - - 0.787 - - zgc:92066 [Source:ZFIN;Acc:ZDB-GENE-040718-72]
8. nucks1a ENSDARG00000078473 28285 1.512 - - - - - - 0.787 - 0.725 nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
9. MYOM2_1 MYOM2_1 4054 1.509 - - - - - 0.704 0.805 - -
10. myl1 ENSDARG00000014196 98943 1.433 0.730 - - - - 0.703 - - - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
11. desma ENSDARG00000058656 30292 1.417 0.709 - - - - - - 0.708 - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
12. syncrip ENSDARG00000040184 24690 0.947 - 0.947 - - - - - - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
13. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 0.926 - 0.926 - - - - - - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
14. casq2 ENSDARG00000008982 21802 0.923 - - - - - - 0.923 - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
15. clta ENSDARG00000045618, ENSDARG00000115484 11767 0.918 - 0.918 - - - - - - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
16. calr ENSDARG00000076290 13987 0.915 - 0.915 - - - - - - - calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
17. pvalb1 ENSDARG00000037789 121195 0.912 - - - - - - 0.912 - - parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
18. selt2 12741 0.912 - 0.912 - - - - - - - selenoprotein T, 2
19. rtn2a ENSDARG00000016088 12184 0.907 - 0.907 - - - - - - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
20. calm2a ENSDARG00000031427, ENSDARG00000111871 43643 0.905 - 0.905 - - - - - - - calmodulin 2a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030804-3]
21. si:ch211-226o13.2 84923 0.896 - 0.896 - - - - - - - si:ch211-226o13.2
22. C1QBP ENSDARG00000039887 11186 0.896 - 0.896 - - - - - - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
23. KDM6B KDM6B 10265 0.892 - 0.892 - - - - - - -
24. srsf2a ENSDARG00000057484 25721 0.891 - 0.891 - - - - - - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
25. ndufa9 ndufa9 8846 0.891 - 0.891 - - - - - - -
26. txnrd1 11401 0.891 - 0.891 - - - - - - - thioredoxin reductase 1
27. denr ENSDARG00000037229 8370 0.885 - 0.885 - - - - - - - density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
28. jph2 ENSDARG00000028625 6706 0.884 - 0.884 - - - - - - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
29. hoxb8a ENSDARG00000056027 6340 0.884 - 0.884 - - - - - - - homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]
30. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 0.879 - 0.879 - - - - - - - leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
31. dlst ENSDARG00000014230, ENSDARG00000113407 6282 0.875 - 0.875 - - - - - - - dihydrolipoamide S-succinyltransferase [Source:ZFIN;Acc:ZDB-GENE-030326-1]
32. dnajb12b ENSDARG00000087473 3811 0.873 - 0.873 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
33. snrnp27 ENSDARG00000035625 9080 0.87 - 0.870 - - - - - - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
34. postnb ENSDARG00000104267 28076 0.87 - - - - - - - - 0.870 periostin, osteoblast specific factor b [Source:ZFIN;Acc:ZDB-GENE-030131-9120]
35. ACVR1B ACVR1B 4824 0.867 - 0.867 - - - - - - -
36. rrp1 ENSDARG00000103337 2366 0.866 - 0.866 - - - - - - - ribosomal RNA processing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9837]
37. ezra ENSDARG00000020944 3105 0.864 - 0.864 - - - - - - - ezrin a [Source:ZFIN;Acc:ZDB-GENE-050522-18]
38. ROMO1 ENSDARG00000038076 7999 0.862 - 0.862 - - - - - - - reactive oxygen species modulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1768]
39. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 0.862 - 0.862 - - - - - - - YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
40. sdc2 ENSDARG00000002731 6607 0.861 - 0.861 - - - - - - - syndecan 2 [Source:ZFIN;Acc:ZDB-GENE-021206-3]
41. WDR83OS ENSDARG00000025554 7117 0.858 - 0.858 - - - - - - - WD repeat domain 83 opposite strand [Source:ZFIN;Acc:ZDB-GENE-040426-1674]
42. si:ch211-114c12.2 ENSDARG00000028542, ENSDARG00000111053 5495 0.858 - 0.858 - - - - - - - si:ch211-114c12.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8522]
43. PRODH_1 PRODH_1 3400 0.858 - 0.858 - - - - - - -
44. polr2d ENSDARG00000076509 3386 0.857 - 0.857 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
45. C1H7orf55 C1H7orf55 2552 0.855 - 0.855 - - - - - - -
46. anxa11b ENSDARG00000002632 5132 0.853 - 0.853 - - - - - - - annexin A11b [Source:ZFIN;Acc:ZDB-GENE-030707-5]
47. agla ENSDARG00000103811 2856 0.853 - 0.853 - - - - - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
48. cxxc5a ENSDARG00000078865 3447 0.853 - 0.853 - - - - - - - CXXC finger protein 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3178]
49. oxa1l ENSDARG00000069313, ENSDARG00000113799 1687 0.852 - 0.852 - - - - - - - oxidase (cytochrome c) assembly 1-like [Source:ZFIN;Acc:ZDB-GENE-071004-49]
50. dnajc18 ENSDARG00000056005 8084 0.851 - 0.851 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
51. wdr75 ENSDARG00000040730 1247 0.85 - 0.850 - - - - - - - WD repeat domain 75 [Source:ZFIN;Acc:ZDB-GENE-030616-5]
52. wasf3 wasf3 3287 0.85 - 0.850 - - - - - - -
53. smo ENSDARG00000002952 6411 0.85 - 0.850 - - - - - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
54. trappc1 ENSDARG00000039005 6990 0.849 - 0.849 - - - - - - - trafficking protein particle complex 1 [Source:ZFIN;Acc:ZDB-GENE-040718-242]
55. PEAK1 ENSDARG00000079756 1330 0.849 - 0.849 - - - - - - - pseudopodium-enriched atypical kinase 1 [Source:ZFIN;Acc:ZDB-GENE-100422-1]
56. arhgap1 ENSDARG00000024324 6904 0.848 - 0.848 - - - - - - - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
57. vash2 ENSDARG00000007774 2537 0.848 - 0.848 - - - - - - - vasohibin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-355]
58. slc38a5a ENSDARG00000009901 2527 0.848 - 0.848 - - - - - - - solute carrier family 38, member 5a [Source:ZFIN;Acc:ZDB-GENE-081105-92]
59. lima1 lima1 4760 0.847 - 0.847 - - - - - - -
60. ccne2 ENSDARG00000098529 4695 0.847 - 0.847 - - - - - - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
61. cdk16_1 ENSDARG00000032072 2031 0.847 - 0.847 - - - - - - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
62. CR847934.1 CR847934.1 2658 0.847 - 0.847 - - - - - - -
63. skp1 ENSDARG00000003151 8172 0.847 - 0.847 - - - - - - - S-phase kinase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1707]
64. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 0.845 0.845 - - - - - - - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
65. nxn ENSDARG00000033978, ENSDARG00000115888 1683 0.844 - 0.844 - - - - - - - nucleoredoxin [Source:ZFIN;Acc:ZDB-GENE-050522-75]
66. gpc4 ENSDARG00000015472 2529 0.844 - 0.844 - - - - - - - glypican 4 [Source:ZFIN;Acc:ZDB-GENE-011119-1]
67. cox6c ENSDARG00000038577 16845 0.844 - 0.844 - - - - - - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
68. rps27.2 ENSDARG00000055475 51081 0.844 0.844 - - - - - - - - ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]
69. dynll2a ENSDARG00000069790, ENSDARG00000114539 2328 0.844 - 0.844 - - - - - - - dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11]
70. SCARF2 1117 0.843 - 0.843 - - - - - - - scavenger receptor class F, member 2
71. pard6b ENSDARG00000003865 990 0.843 - 0.843 - - - - - - - par-6 partitioning defective 6 homolog beta (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090312-133]
72. akr1b1 ENSDARG00000006215 2511 0.843 - 0.843 - - - - - - - aldo-keto reductase family 1, member B1 (aldose reductase) [Source:ZFIN;Acc:ZDB-GENE-040625-7]
73. uba5 ENSDARG00000063588 1260 0.843 - 0.843 - - - - - - - ubiquitin-like modifier activating enzyme 5 [Source:ZFIN;Acc:ZDB-GENE-031112-2]
74. taf5 ENSDARG00000018325 1363 0.842 - 0.842 - - - - - - - TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
75. HNRNPAB HNRNPAB 22267 0.841 - - - 0.841 - - - - -
76. TSPY2 TSPY2 1371 0.841 - 0.841 - - - - - - -
77. tbl1x ENSDARG00000060438 1386 0.841 - 0.841 - - - - - - - transducin beta like 1 X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
78. CU019646.2 CU019646.2 519 0.84 - 0.840 - - - - - - -
79. mboat7 ENSDARG00000033436 848 0.84 - 0.840 - - - - - - - membrane bound O-acyltransferase domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1516]
80. PLEKHG1 2100 0.84 - 0.840 - - - - - - - pleckstrin homology and RhoGEF domain containing G1, transcript variant X2
81. uqcrq ENSDARG00000029064, ENSDARG00000116372 32190 0.839 - - - - - - - - 0.839 ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
82. CR352249.1 ENSDARG00000114701 857 0.839 - 0.839 - - - - - - - solute carrier family 38, member 8b [Source:NCBI gene;Acc:795255]
83. C4H12orf45 C4H12orf45 483 0.838 - 0.838 - - - - - - -
84. zic2a ENSDARG00000015554 2860 0.838 - 0.838 - - - - - - - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
85. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.838 - 0.838 - - - - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
86. lonrf1l ENSDARG00000078567 1049 0.838 - 0.838 - - - - - - - LON peptidase N-terminal domain and ring finger 1, like [Source:ZFIN;Acc:ZDB-GENE-081104-397]
87. mettl16 ENSDARG00000055838 818 0.838 - 0.838 - - - - - - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
88. malt1a malt1a 903 0.837 - 0.837 - - - - - - -
89. gprc5c ENSDARG00000100862 457 0.837 - 0.837 - - - - - - - G protein-coupled receptor, class C, group 5, member C [Source:ZFIN;Acc:ZDB-GENE-070928-27]
90. ZDHHC5 ZDHHC5 836 0.837 - 0.837 - - - - - - -
91. frem1a ENSDARG00000069473 1847 0.836 - 0.836 - - - - - - - Fras1 related extracellular matrix 1a [Source:ZFIN;Acc:ZDB-GENE-081119-1]
92. dnajc5aa ENSDARG00000042948 2885 0.836 - 0.836 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
93. arfgef2 ENSDARG00000074702 1593 0.836 - 0.836 - - - - - - - ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-090312-50]
94. wu:fc47e11 539 0.836 - 0.836 - - - - - - - wu:fc47e11
95. atraid ENSDARG00000043388 648 0.836 - 0.836 - - - - - - - all-trans retinoic acid-induced differentiation factor [Source:ZFIN;Acc:ZDB-GENE-040724-177]
96. and3 ENSDARG00000056873 22650 0.835 - 0.835 - - - - - - - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
97. acsl3b ENSDARG00000014674 3748 0.835 - 0.835 - - - - - - - acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
98. gpatch1 ENSDARG00000033418 1349 0.833 - 0.833 - - - - - - - G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040914-65]
99. pleca ENSDARG00000062590 16794 0.833 - 0.833 - - - - - - - plectin a [Source:ZFIN;Acc:ZDB-GENE-030131-8984]
100. ENSDARG00000092971 ENSDARG00000092971 563 0.833 - 0.833 - - - - - - -

There are 176 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA