Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atp5d

Gene Name Gene ID Reads Annotation
atp5d 20825 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit










Genes with expression patterns similar to atp5d

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atp5d 20825 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit
2. eif2s1b ENSDARG00000052178 11961 2.511 - - 0.795 - - 0.797 - - 0.919 eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
3. eif3ba ENSDARG00000059654 22960 2.431 0.843 - - - - 0.786 0.802 - - eukaryotic translation initiation factor 3, subunit Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2748]
4. ndufa10 ENSDARG00000013333 6597 2.409 - 0.736 - - - 0.870 0.803 - - NADH:ubiquinone oxidoreductase subunit A10 [Source:ZFIN;Acc:ZDB-GENE-030131-670]
5. atp5o 10343 2.378 0.838 - - 0.731 - 0.809 - - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
6. cox7a2a ENSDARG00000053217 12564 2.348 0.808 - - 0.726 - 0.814 - - - cytochrome c oxidase subunit 7A2a [Source:ZFIN;Acc:ZDB-GENE-050522-153]
7. hspd1 ENSDARG00000056160 13690 2.324 0.830 - - - 0.758 - 0.736 - - heat shock 60 protein 1 [Source:ZFIN;Acc:ZDB-GENE-021206-1]
8. pfdn4 ENSDARG00000061228 8266 2.304 0.712 - - - 0.809 0.783 - - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
9. sdhdb ENSDARG00000030139 9761 2.28 - - 0.792 - - 0.706 0.782 - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
10. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 1.737 - - - - - 0.836 - - 0.901 synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
11. NDUFC2 ENSDARG00000102115 7848 1.731 - - - - - 0.809 - - 0.922 NADH:ubiquinone oxidoreductase subunit C2 [Source:ZFIN;Acc:ZDB-GENE-050320-87]
12. eif2s3 ENSDARG00000008292 17051 1.68 - 0.768 - - - - - - 0.912 eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
13. sdhb ENSDARG00000075768 5493 1.667 - - 0.759 - - - - - 0.908 succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
14. rpl13 ENSDARG00000099380 20663 1.666 - - - - - 0.845 0.821 - - ribosomal protein L13 [Source:ZFIN;Acc:ZDB-GENE-031007-1]
15. ube2v2 ENSDARG00000028198 23341 1.663 - 0.873 - - - 0.790 - - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
16. C22H19orf70 C22H19orf70 4393 1.654 - - - - - 0.741 - - 0.913
17. ncl ENSDARG00000002710 16951 1.636 0.841 0.795 - - - - - - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
18. ptpn21 ENSDARG00000062248 2010 1.628 - 0.719 - - - - - - 0.909 protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
19. samm50 ENSDARG00000045814 4511 1.626 - - - - - 0.721 - - 0.905 SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
20. ISCU ISCU 3648 1.626 - - - - - 0.713 - - 0.913
21. atf4b1 atf4b1 17316 1.62 - - - - - 0.854 0.766 - -
22. idh3b ENSDARG00000044753, ENSDARG00000110992 3965 1.614 - - - - - 0.710 - - 0.904 isocitrate dehydrogenase 3 (NAD+) beta [Source:ZFIN;Acc:ZDB-GENE-040625-174]
23. pgk1 ENSDARG00000054191 7652 1.611 - 0.702 - - - - 0.909 - - phosphoglycerate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2711]
24. ndufv1 ENSDARG00000036438 8437 1.595 - 0.774 - - - - 0.821 - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
25. scrt2 ENSDARG00000056175 4331 1.591 - - 0.710 - - - - - 0.881 scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
26. pl10 pl10 10795 1.589 - 0.711 - - - - - - 0.878
27. nutf2 ENSDARG00000056531, ENSDARG00000115472 17177 1.579 - - - 0.772 - 0.807 - - - nuclear transport factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-77]
28. igf2bp1 ENSDARG00000061478 22924 1.574 - 0.856 - - - 0.718 - - - insulin-like growth factor 2 mRNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1258]
29. cycsb ENSDARG00000044562 40227 1.564 - - - - - 0.770 0.794 - - cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
30. uqcrh ENSDARG00000059128 30831 1.556 - - - 0.744 - - 0.812 - - ubiquinol-cytochrome c reductase hinge protein [Source:ZFIN;Acc:ZDB-GENE-051030-93]
31. si:ch1073-325m22.2 ENSDARG00000095921 8534 1.552 - 0.738 - - - 0.814 - - - si:ch1073-325m22.2 [Source:NCBI gene;Acc:100333135]
32. ppdpfb ENSDARG00000031317 12820 1.547 - - - - - 0.738 0.809 - - pancreatic progenitor cell differentiation and proliferation factor b [Source:ZFIN;Acc:ZDB-GENE-030131-8247]
33. celf2 ENSDARG00000002131, ENSDARG00000110267 15605 1.542 - 0.703 - - - 0.839 - - - cugbp, Elav-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-030826-35]
34. rps25 ENSDARG00000041811 52182 1.541 - - - - - 0.777 0.764 - - ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-040426-1788]
35. uqcc uqcc 4742 1.531 - - - - - 0.769 0.762 - -
36. znf706 ENSDARG00000056307 12518 1.526 0.800 - - - - 0.726 - - - zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
37. pdhb ENSDARG00000021346 9088 1.526 - 0.738 - - - - 0.788 - - pyruvate dehydrogenase E1 beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2173]
38. cct5 ENSDARG00000045399 11572 1.518 - 0.783 - - - 0.735 - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
39. pdcd4a ENSDARG00000021702 7293 1.511 - 0.719 - - - 0.792 - - - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
40. ndufs2 ENSDARG00000007526 6516 1.507 - 0.708 - - - 0.799 - - - NADH:ubiquinone oxidoreductase core subunit S2 [Source:ZFIN;Acc:ZDB-GENE-050522-273]
41. ndufb7 ENSDARG00000033789 5898 1.505 - 0.739 - - - - 0.766 - - NADH:ubiquinone oxidoreductase subunit B7 [Source:ZFIN;Acc:ZDB-GENE-040426-1886]
42. sdhc ENSDARG00000038608, ENSDARG00000110542, ENSDARG00000114672 8862 1.5 - 0.776 - - - - 0.724 - - succinate dehydrogenase complex, subunit C, integral membrane protein [Source:ZFIN;Acc:ZDB-GENE-040801-26]
43. rps27a ENSDARG00000032725, ENSDARG00000114059 132883 1.496 - - - - - 0.752 0.744 - - ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
44. gstm gstm 4064 1.495 - 0.752 - - - 0.743 - - -
45. ndufb10 ENSDARG00000028889 7680 1.495 - - - - - 0.731 0.764 - - NADH:ubiquinone oxidoreductase subunit B10 [Source:ZFIN;Acc:ZDB-GENE-040426-1691]
46. jph1b ENSDARG00000038826 7416 1.489 - 0.732 - - - - 0.757 - - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
47. chac1 ENSDARG00000070426 17552 1.487 - - - 0.710 - - 0.777 - - ChaC, cation transport regulator homolog 1 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-030131-1957]
48. ndufab1b ENSDARG00000014915 12796 1.484 - 0.749 - - - - 0.735 - - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
49. selt1a 9746 1.477 - - - 0.736 - 0.741 - - - selenoprotein T, 1a
50. plecb ENSDARG00000021987 13621 1.474 - 0.773 - - - - 0.701 - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
51. serbp1a ENSDARG00000074242 10818 1.472 - - - - - 0.708 0.764 - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
52. atp5g1 51897 1.472 - - 0.762 0.710 - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
53. ryr1b ENSDARG00000023797 5693 1.472 0.768 0.704 - - - - - - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
54. ccdc47 ENSDARG00000054362 5970 1.471 0.706 0.765 - - - - - - - coiled-coil domain containing 47 [Source:ZFIN;Acc:ZDB-GENE-040912-15]
55. cfl2 ENSDARG00000014106 8051 1.466 - 0.729 - - - - 0.737 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
56. cct6a ENSDARG00000021252 33641 1.466 - - - - - 0.758 0.708 - - chaperonin containing TCP1, subunit 6A (zeta 1) [Source:ZFIN;Acc:ZDB-GENE-011018-2]
57. tuba8l2 ENSDARG00000031164 19019 1.463 - 0.735 - - - 0.728 - - - tubulin, alpha 8 like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1646]
58. grpel2 ENSDARG00000069421 5673 1.463 - 0.720 0.743 - - - - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
59. mybphb ENSDARG00000003081 5208 1.447 0.722 0.725 - - - - - - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
60. zranb2 ENSDARG00000044332 6723 1.447 - 0.719 - - - 0.728 - - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
61. atp5h 18018 1.446 - 0.708 - - - 0.738 - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
62. NDUFA3 ENSDARG00000041400 7939 1.445 - - - - - 0.729 0.716 - - NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
63. papola ENSDARG00000009585 9567 1.441 - 0.726 - - - 0.715 - - - poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]
64. DNAJA4 ENSDARG00000051762 5657 1.439 0.724 0.715 - - - - - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
65. pygma ENSDARG00000055518 15972 1.439 - 0.716 - - - - 0.723 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
66. hectd1 ENSDARG00000054213 3501 1.437 - - 0.720 - - 0.717 - - - HECT domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030616-153]
67. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.435 - 0.711 0.724 - - - - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
68. smyd1b ENSDARG00000091253 4964 1.435 - 0.727 - - 0.708 - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
69. EML4_1 EML4_1 8736 1.423 - 0.714 - - - 0.709 - - -
70. vcl vcl 6667 1.42 - 0.713 - 0.707 - - - - -
71. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 1.419 - 0.715 0.704 - - - - - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
72. rpl34 ENSDARG00000029500 48540 0.929 - - - - - - 0.929 - - ribosomal protein L34 [Source:ZFIN;Acc:ZDB-GENE-040426-1033]
73. cox6b2 ENSDARG00000037860 33134 0.922 - - - - - 0.922 - - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
74. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 0.917 - - - - - - - - 0.917 metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]
75. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 0.916 - - - - - - - - 0.916 eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
76. dtnba ENSDARG00000077694 5483 0.916 - - - - - - - - 0.916 dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
77. lin7a ENSDARG00000013414 1589 0.913 - - - - - - - - 0.913 lin-7 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-1665]
78. cxcl14 ENSDARG00000056627, ENSDARG00000113190 4665 0.912 - - - - - - - - 0.912 chemokine (C-X-C motif) ligand 14 [Source:ZFIN;Acc:ZDB-GENE-000619-1]
79. efr3bb 1533 0.912 - - - - - - - - 0.912 EFR3 homolog Bb (S. cerevisiae), transcript variant X2
80. ltv1 ENSDARG00000008490 2403 0.912 - - - - - - - - 0.912 LTV1 ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-040712-1]
81. zcchc9 ENSDARG00000007531 1748 0.911 - - - - - - - - 0.911 zinc finger, CCHC domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-031030-9]
82. shfm1 7620 0.911 - - - - - - - - 0.911 split hand/foot malformation (ectrodactyly) type 1
83. znf395a ENSDARG00000060113 3874 0.911 - - - - - - - - 0.911 zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]
84. clpp ENSDARG00000020679 2125 0.911 - - - - - - - - 0.911 caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-7860]
85. mterfd3 mterfd3 1004 0.911 - - - - - - - - 0.911
86. grin1a ENSDARG00000027828 1327 0.91 - - - - - - - - 0.910 glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
87. zgc:123105 ENSDARG00000003127 3061 0.91 - - - - - - - - 0.910 zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
88. ndrg3a ENSDARG00000013087 5581 0.91 - - - - - - - - 0.910 ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
89. NRAP ENSDARG00000009341 3565 0.91 - - - - - - - - 0.910 nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
90. psmd4a ENSDARG00000101295 1410 0.909 - - - - - - - - 0.909 proteasome 26S subunit, non-ATPase 4a [Source:ZFIN;Acc:ZDB-GENE-040625-104]
91. dctn5 ENSDARG00000003573 1100 0.909 - - - - - - - - 0.909 dynactin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-201]
92. kif2c ENSDARG00000076228 2281 0.909 - - - - - - - - 0.909 kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
93. rccd1 ENSDARG00000071074 560 0.909 - - - - - - - - 0.909 RCC1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3552]
94. CABZ01049362.1 ENSDARG00000099508 570 0.909 - - - - - - - - 0.909
95. U2_6 U2_6 1155 0.909 - - - - - - - - 0.909
96. rab42a ENSDARG00000034215 692 0.909 - - - - - - - - 0.909 RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
97. mboat2b ENSDARG00000042551 910 0.909 - - - - - - - - 0.909 membrane bound O-acyltransferase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-185]
98. kctd1 ENSDARG00000074056 652 0.909 - - - - - - - - 0.909 potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]
99. ARSJ ENSDARG00000077590 684 0.909 - - - - - - - - 0.909 arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
100. fam49a ENSDARG00000006672 939 0.909 - - - - - - - - 0.909 family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]

There are 493 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA