Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atp2b3b

Gene Name Gene ID Reads Annotation
atp2b3b ENSDARG00000023445 1424 ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]










Genes with expression patterns similar to atp2b3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atp2b3b ENSDARG00000023445 1424 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
2. stmn2a ENSDARG00000033234 2272 3.644 0.953 0.880 - - - 0.970 0.841 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
3. adam23a ENSDARG00000062323 580 3.642 0.850 0.917 - - - 0.892 0.983 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
4. TUSC5 TUSC5 1436 3.625 0.949 0.919 - - - 0.988 0.769 - -
5. nmnat2 ENSDARG00000004580 370 3.593 0.976 0.869 - - - 0.850 0.898 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
6. zic4 ENSDARG00000031307 1228 3.581 0.894 0.868 - - - 0.943 0.876 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
7. cers6 ENSDARG00000053583 247 3.577 0.873 0.845 - - - 0.908 0.951 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
8. upf3a ENSDARG00000069297, ENSDARG00000111067 196 3.572 0.849 0.845 - - - 0.933 0.945 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
9. TUBB8P7_1 TUBB8P7_1 2722 3.556 0.878 0.816 - - - 0.917 0.945 - -
10. gap43 ENSDARG00000099744 4114 3.515 0.903 0.811 - - - 0.912 0.889 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
11. syt11a ENSDARG00000057913 1145 3.509 0.761 0.822 - - - 0.947 0.979 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
12. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.502 0.933 0.706 - - - 0.978 0.885 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
13. snap25a ENSDARG00000020609 4537 3.493 0.873 0.835 - - - 0.922 0.863 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
14. SV2B SV2B 208 3.462 0.948 0.802 - - - 0.904 0.808 - -
15. slc1a3a ENSDARG00000104431 9888 3.455 0.855 0.742 - - - 0.934 0.924 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
16. slc32a1 ENSDARG00000059775 1092 3.454 0.735 0.950 - - - 0.929 0.840 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
17. scn8aa ENSDARG00000005775 792 3.448 0.890 0.890 - - - 0.874 0.794 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
18. cacna2d3 ENSDARG00000078760 211 3.441 0.935 0.871 - - - 0.837 0.798 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
19. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 3.428 0.769 0.907 - - - 0.884 0.868 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
20. pcdh1gc5 ENSDARG00000104826 10052 3.42 0.704 0.815 - - - 0.939 0.962 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
21. stx1b ENSDARG00000000503 2724 3.396 0.836 0.846 - - - 0.837 0.877 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
22. slc1a2b ENSDARG00000102453 3136 3.395 0.923 0.723 - - - 0.912 0.837 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
23. si:ch211-11c15.3 si:ch211-11c15.3 1279 3.392 0.937 0.708 - - - 0.971 0.776 - -
24. tnika ENSDARG00000056218 728 3.367 0.790 0.762 - - - 0.884 0.931 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
25. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 3.364 0.733 0.907 - - - 0.854 0.870 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
26. MAP1A MAP1A 847 3.359 0.864 0.783 - - - 0.926 0.786 - -
27. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 3.343 0.737 0.887 - - - 0.827 0.892 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
28. nadl1.1 1200 3.338 0.702 0.866 - - - 0.811 0.959 - - neural adhesion molecule L1.1, transcript variant X1
29. amph ENSDARG00000007663 599 3.332 0.852 0.802 - - - 0.853 0.825 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
30. PPFIA3 ENSDARG00000077053 310 3.33 0.836 0.716 - - - 0.810 0.968 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
31. MAP6 MAP6 643 3.329 0.751 0.799 - - - 0.823 0.956 - -
32. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 3.302 0.800 0.759 - - - 0.840 0.903 - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
33. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 3.297 0.810 0.812 - - - 0.786 0.889 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
34. CLIP3 ENSDARG00000054456 734 3.271 0.709 0.796 - - - 0.875 0.891 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
35. rtn1b ENSDARG00000021143 1682 3.26 0.764 0.707 - - - 0.943 0.846 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
36. CABZ01065506.1 CABZ01065506.1 204 3.25 0.787 0.716 - - - 0.873 0.874 - -
37. lgi1a ENSDARG00000020493 1218 3.245 0.789 0.774 - - - 0.706 0.976 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
38. rbfox3 rbfox3 1443 3.229 0.811 0.787 - - - 0.788 0.843 - -
39. SKOR2 SKOR2 1041 3.225 0.845 0.890 - - - 0.714 0.776 - -
40. ndrg4 ENSDARG00000103937 1234 3.216 0.830 0.709 - - - 0.886 0.791 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
41. scrt2 ENSDARG00000056175 4331 3.14 0.752 0.721 - - - 0.911 0.756 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
42. pcsk1nl ENSDARG00000076170 1232 2.837 - 0.915 - - - 0.970 0.952 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
43. lhx5 ENSDARG00000057936 785 2.837 0.960 - - - - 0.988 0.889 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
44. nrn1a ENSDARG00000071860 1311 2.813 0.908 - - - - 0.953 0.952 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
45. st18 663 2.809 - 0.905 - - - 0.939 0.965 - - suppression of tumorigenicity 18, zinc finger
46. nptx1l ENSDARG00000074671 569 2.798 0.879 - - - - 0.979 0.940 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
47. atpv0e2 ENSDARG00000059057 585 2.782 0.938 - - - - 0.869 0.975 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
48. mapk12b ENSDARG00000006409 2246 2.781 - 0.941 - - - 0.913 0.927 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
49. SNAP91 ENSDARG00000098809 556 2.78 - 0.935 - - - 0.936 0.909 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
50. si:ch73-21g5.7 ENSDARG00000093156 9412 2.774 - 0.930 - - - 0.903 0.941 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
51. adcyap1b ENSDARG00000027740 1539 2.767 0.955 - - - - 0.941 0.871 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
52. dpysl5a ENSDARG00000011141 1827 2.759 - 0.915 - - - 0.973 0.871 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
53. atp1b4 ENSDARG00000053262 1337 2.74 - 0.886 - - - 0.935 0.919 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
54. stxbp1a ENSDARG00000001994 5154 2.724 - 0.847 - - - 0.957 0.920 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
55. vsnl1a ENSDARG00000023228 1584 2.722 - 0.961 - - - 0.976 0.785 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
56. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 2.717 0.976 0.933 - - - 0.808 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
57. mdkb ENSDARG00000020708 5393 2.713 0.921 - - - - 0.976 0.816 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
58. sox2 ENSDARG00000070913 2763 2.713 - 0.880 - - - 0.862 0.971 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
59. C7H4orf48 C7H4orf48 1455 2.704 0.783 - - - - 0.952 0.969 - -
60. her15.2 her15.2 1701 2.703 - 0.840 - - - 0.885 0.978 - -
61. lrrc4.1 ENSDARG00000069402 323 2.702 - 0.913 - - - 0.917 0.872 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
62. stmn1b ENSDARG00000033655 9491 2.701 0.793 - - - - 0.980 0.928 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
63. ptbp2b ENSDARG00000015901 2458 2.701 - - - 0.983 - 0.868 0.850 - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
64. eno2 ENSDARG00000014287 2162 2.693 0.809 - - - - 0.910 0.974 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
65. pou4f1 ENSDARG00000005559 821 2.693 0.943 - - - - 0.846 0.904 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
66. zic1 ENSDARG00000015567 2520 2.692 0.890 - - - - 0.938 0.864 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
67. zic5 ENSDARG00000016022 1034 2.689 0.952 - - - - 0.858 0.879 - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
68. cnrip1a ENSDARG00000091683 1491 2.685 - 0.814 - - - 0.942 0.929 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
69. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.679 0.916 - - - - 0.961 0.802 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
70. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.678 - 0.858 - - - 0.936 0.884 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
71. B4GALNT1 B4GALNT1 352 2.675 0.795 0.956 - - - 0.924 - - -
72. gabra5 ENSDARG00000070730 156 2.674 0.825 - - - - 0.916 0.933 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
73. necap1 ENSDARG00000020798 612 2.671 0.782 - - - - 0.941 0.948 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
74. st6gal1 ENSDARG00000044514 142 2.67 0.760 - - - - 0.920 0.990 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
75. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.649 0.905 - - - - 0.897 0.847 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
76. syt9a ENSDARG00000003994 298 2.649 0.974 0.716 - - - 0.959 - - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
77. GADD45G GADD45G 382 2.64 0.975 0.716 - - - - 0.949 - -
78. scdb ENSDARG00000030265 271 2.636 0.836 0.863 - - - 0.937 - - - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
79. mllt11 ENSDARG00000071026 2518 2.631 0.798 - - - - 0.924 0.909 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
80. spock2 ENSDARG00000075393 791 2.629 0.786 - - - - 0.962 0.881 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
81. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.625 - 0.792 - - - 0.897 0.936 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
82. cadm3 ENSDARG00000057013 1545 2.619 0.940 - - - - 0.918 0.761 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
83. aplp1 ENSDARG00000098368 2317 2.619 0.911 0.783 - - - 0.925 - - - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
84. scn2b ENSDARG00000101713 796 2.617 0.873 0.802 - - - - 0.942 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
85. myt1b ENSDARG00000102879 5411 2.617 - 0.888 - - - 0.846 0.883 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
86. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.616 - 0.733 - - - 0.928 0.955 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
87. ppp3ca ENSDARG00000004988 615 2.612 0.850 - - - - 0.936 0.826 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
88. thsd7ba ENSDARG00000095022 231 2.609 - 0.969 - - - 0.939 0.701 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
89. zic3 ENSDARG00000071497 1448 2.608 0.837 - - - - 0.884 0.887 - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
90. rab3ab ENSDARG00000043835 1267 2.606 0.798 - - - - 0.897 0.911 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
91. TUBB2A TUBB2A 142 2.606 0.919 - - - - 0.870 0.817 - -
92. sall3b ENSDARG00000057586 982 2.606 - 0.907 - - - 0.784 0.915 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
93. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.604 0.755 - - - - 0.948 0.901 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
94. calb1 ENSDARG00000031598 252 2.601 0.885 - - - - 0.864 0.852 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
95. KCNAB2 KCNAB2 129 2.591 0.965 - - - - 0.868 0.758 - -
96. BX957337.1 BX957337.1 1685 2.588 - 0.790 - - - 0.943 0.855 - -
97. add2 ENSDARG00000074581 1402 2.581 0.814 - - - - 0.848 0.919 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
98. nova2 ENSDARG00000017673 7685 2.58 - 0.876 - - - 0.752 0.952 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
99. stmn2b ENSDARG00000070537 1586 2.573 0.780 0.874 - - - 0.919 - - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
100. sv2bb ENSDARG00000060711 196 2.568 0.793 0.863 - - - - 0.912 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]

There are 2576 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA