Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for atp2a1

Gene Name Gene ID Reads Annotation
atp2a1 ENSDARG00000020574 291561 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]










Genes with expression patterns similar to atp2a1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atp2a1 ENSDARG00000020574 291561 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
2. mylz3 ENSDARG00000017441 303597 7.875 0.954 0.777 0.940 0.918 0.969 0.833 0.806 0.777 0.901 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
3. ckma ENSDARG00000035327, ENSDARG00000114671 418792 7.234 0.944 0.816 0.937 0.912 0.944 0.913 - 0.843 0.925 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
4. ckmb ENSDARG00000040565 505935 7.017 0.911 - 0.943 0.892 0.951 0.807 0.851 0.806 0.856 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
5. tpma ENSDARG00000033683 752432 6.994 0.938 - 0.961 0.877 0.933 0.780 0.823 0.919 0.763 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
6. tnnt3a ENSDARG00000030270 112506 6.906 0.922 - 0.942 0.831 0.950 0.737 0.867 0.778 0.879 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
7. myhz1.3 ENSDARG00000067997 155509 6.759 0.944 - 0.935 0.816 0.939 0.836 0.809 0.768 0.712 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
8. acta1b ENSDARG00000055618 195597 6.725 0.961 - 0.945 0.704 0.820 0.810 0.816 0.940 0.729 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
9. CR847973.1 ENSDARG00000115516 8754 6.704 0.857 - 0.900 0.895 0.762 0.741 0.797 0.898 0.854
10. myl1 ENSDARG00000014196 98943 6.482 0.900 - 0.940 0.728 0.951 0.782 0.708 0.757 0.716 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
11. si:ch211-226o13.2 84923 6.164 0.791 - 0.961 0.926 0.914 0.788 - 0.867 0.917 si:ch211-226o13.2
12. tnni2a.4 ENSDARG00000029069 122344 6.064 0.934 - 0.900 0.852 0.948 0.718 - 0.875 0.837 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
13. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 6.016 0.871 0.847 0.898 - 0.884 - 0.780 0.866 0.870 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
14. SYNPO2L SYNPO2L 6697 5.92 0.894 - 0.877 0.863 0.850 0.715 - 0.883 0.838
15. ttnb ttnb 73721 5.901 0.750 - 0.906 0.923 0.918 0.761 - 0.834 0.809
16. mybpc2b ENSDARG00000021265 9618 5.865 0.894 - 0.892 0.835 0.801 - 0.747 0.894 0.802 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
17. hhatla ENSDARG00000039051 6598 5.738 0.923 - 0.842 0.851 0.772 - 0.740 0.727 0.883 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
18. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 5.724 0.892 - 0.925 0.838 0.721 0.771 0.729 0.848 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
19. ryr3 ENSDARG00000071331 6795 5.711 0.812 - 0.849 0.859 0.782 0.781 0.766 - 0.862 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
20. tnnt2d ENSDARG00000002988 7590 5.696 0.814 - 0.834 0.835 0.814 - 0.766 0.843 0.790 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
21. CR354540.2 ENSDARG00000117517 18452 5.684 0.805 - 0.886 0.861 0.832 - 0.742 0.749 0.809
22. pkmb ENSDARG00000099860 25094 5.655 0.835 - 0.770 0.802 0.847 - 0.739 0.861 0.801 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
23. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 5.595 0.926 - 0.776 0.751 - 0.744 0.811 0.765 0.822 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
24. prx ENSDARG00000017246 6183 5.461 0.837 - 0.864 0.837 0.742 - 0.765 0.701 0.715 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
25. casq1b ENSDARG00000018105 2643 5.379 0.811 - 0.778 0.754 0.791 - 0.767 0.715 0.763 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
26. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 5.358 0.767 - 0.746 0.800 0.769 0.720 - 0.724 0.832 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
27. myoz1b ENSDARG00000071445 13381 5.313 0.947 - 0.901 0.897 0.862 - - 0.807 0.899 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
28. tnnt3b ENSDARG00000068457 101827 5.158 0.799 - 0.940 0.891 0.803 0.820 - 0.905 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
29. pvalb2 ENSDARG00000002768, ENSDARG00000114085 333278 5.155 0.927 - 0.887 - 0.825 0.701 - 0.916 0.899 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
30. neb ENSDARG00000032630, ENSDARG00000109273 19493 5.135 0.832 - 0.898 0.919 0.841 - - 0.794 0.851 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
31. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 5.131 0.927 - 0.833 0.892 - 0.714 - 0.862 0.903 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
32. jph2 ENSDARG00000028625 6706 5.049 0.892 - - 0.813 0.829 - 0.771 0.883 0.861 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
33. srl ENSDARG00000104587 11126 5.033 0.879 - 0.856 0.846 0.797 - 0.798 0.857 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
34. pvalb4 ENSDARG00000024433 35736 5.031 0.919 - 0.863 0.859 0.897 - 0.774 0.719 - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
35. rtn2a ENSDARG00000016088 12184 4.97 0.892 - 0.848 0.789 0.850 - 0.782 0.809 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
36. ank1 ank1 5209 4.906 0.835 - 0.878 0.721 0.751 - - 0.874 0.847
37. BX294434.1 ENSDARG00000061272 6493 4.89 0.884 - 0.856 0.776 - - 0.761 0.764 0.849 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
38. tnnc2 ENSDARG00000070835, ENSDARG00000111155 259313 4.839 0.878 0.751 - 0.745 - 0.848 0.719 0.898 - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
39. SYNPO2 SYNPO2 7382 4.75 - - 0.920 0.739 0.768 0.760 - 0.805 0.758
40. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 4.748 0.865 - 0.706 0.712 - - 0.771 0.856 0.838 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
41. SPEG SPEG 4017 4.724 0.787 - 0.818 0.807 0.805 - 0.780 - 0.727
42. sar1ab ENSDARG00000033320 3984 4.722 0.802 - 0.803 0.845 0.831 - 0.721 0.720 - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
43. zgc:92518 ENSDARG00000016343 3837 4.683 0.928 - 0.742 0.714 0.759 0.788 0.752 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
44. jph1a ENSDARG00000058603 2852 4.676 - - 0.800 0.790 - 0.741 0.741 0.813 0.791 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
45. NRAP ENSDARG00000009341 3565 4.631 0.858 - 0.806 0.783 0.722 0.729 0.733 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
46. PTPLA PTPLA 4044 4.57 0.829 - 0.726 0.718 - - 0.730 0.753 0.814
47. ptrfa ptrfa 4363 4.519 0.832 - 0.747 0.724 0.733 0.721 - - 0.762
48. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 4.517 0.950 - 0.940 - 0.945 0.861 - 0.821 - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
49. actc1b ENSDARG00000099197 324665 4.504 0.919 - 0.934 0.791 0.958 - - 0.902 - actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
50. mylpfb ENSDARG00000002589 70167 4.491 - - 0.943 0.914 0.917 0.861 - 0.856 - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
51. casq2 ENSDARG00000008982 21802 4.455 0.933 - 0.885 0.874 0.938 - - 0.825 - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
52. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 4.379 0.905 - 0.924 0.919 0.928 - - 0.703 - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
53. ttna ttna 101197 4.373 0.827 - 0.920 - 0.909 - - 0.864 0.853
54. pgam2 ENSDARG00000057571 23387 4.254 0.882 - 0.776 0.850 0.913 - - 0.833 - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
55. tmem38a ENSDARG00000024047 41883 4.251 0.952 - 0.873 0.761 0.849 - - 0.816 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
56. pygma ENSDARG00000055518 15972 4.227 0.944 - - - 0.907 - 0.746 0.886 0.744 phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
57. murcb murcb 13655 4.169 0.926 - 0.785 0.885 - - 0.784 0.789 -
58. eef2l2 ENSDARG00000035256 6815 4.121 0.877 - 0.893 0.825 0.793 - - 0.733 - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
59. tgm2a ENSDARG00000070157 4516 4.118 0.916 - 0.852 - 0.834 - 0.745 - 0.771 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
60. aldoab ENSDARG00000034470 88942 4.104 0.951 - - 0.760 0.884 - 0.707 0.802 - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
61. EHBP1L1 EHBP1L1 2500 4.09 0.872 - 0.836 0.802 0.815 - 0.765 - -
62. myom1a ENSDARG00000061249 10230 4.068 - - 0.859 - - 0.753 0.787 0.844 0.825 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
63. trdn ENSDARG00000041779 4283 4.061 0.854 - 0.874 - 0.825 - 0.754 - 0.754 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
64. si:ch211-114n24.7 si:ch211-114n24.7 2544 4.06 0.841 - 0.860 0.835 0.812 - 0.712 - -
65. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 59212 4.05 - - 0.891 0.789 0.782 - - 0.788 0.800 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
66. ryr1b ENSDARG00000023797 5693 4.021 - - 0.802 - 0.774 - 0.803 0.771 0.871 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
67. murca murca 6614 3.997 0.879 - 0.871 0.702 0.795 0.750 - - -
68. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 3.994 0.859 - 0.815 0.758 - - 0.746 0.816 - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
69. klhl31 ENSDARG00000039066 13656 3.985 - - 0.838 0.718 0.781 - - 0.852 0.796 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
70. MYOM2_1 MYOM2_1 4054 3.97 - - 0.777 0.814 - 0.718 - 0.812 0.849
71. MYOM1 MYOM1 3870 3.944 0.842 - 0.796 - - - 0.755 0.737 0.814
72. mdh1b ENSDARG00000018008 3196 3.938 0.849 - 0.781 0.758 - - 0.762 - 0.788 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
73. cap2 ENSDARG00000104478 3266 3.898 0.861 - - 0.744 - - 0.741 0.736 0.816 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
74. nexn ENSDARG00000057317 10972 3.883 0.902 - 0.731 - - 0.731 0.783 - 0.736 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
75. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 3.856 0.703 - - 0.756 - 0.740 0.788 0.869 - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
76. adss ENSDARG00000002071 5497 3.792 0.793 - 0.784 - 0.761 - 0.751 0.703 - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
77. mybpc3 ENSDARG00000011615 7271 3.762 - - 0.734 0.701 0.760 - - 0.797 0.770 myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
78. stac3 ENSDARG00000098883 1765 3.755 0.876 - 0.721 - - 0.709 0.736 - 0.713 SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
79. znf648 ENSDARG00000104823 1918 3.746 0.756 - 0.722 0.724 0.720 - - - 0.824 zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
80. gapdh ENSDARG00000043457 68684 3.464 - - 0.856 0.883 0.845 - - 0.880 - glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
81. desma ENSDARG00000058656 30292 3.454 0.941 - 0.877 0.756 0.880 - - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
82. tmod4 ENSDARG00000020890 17436 3.441 - - 0.890 0.845 0.849 - - - 0.857 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
83. actn3b ENSDARG00000001431 15747 3.398 0.928 - 0.856 0.801 0.813 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
84. ak1 ENSDARG00000001950 26964 3.337 0.736 - - 0.844 0.939 - - 0.818 - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
85. atp2a1l ENSDARG00000035458 6222 3.266 - - 0.783 0.753 - - - 0.876 0.854 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
86. tpi1b ENSDARG00000040988, ENSDARG00000113061 29752 3.262 - - 0.867 0.809 0.812 - - 0.774 - triosephosphate isomerase 1b [Source:ZFIN;Acc:ZDB-GENE-020416-4]
87. eno3 ENSDARG00000039007 11355 3.26 - - 0.792 0.836 0.784 - - - 0.848 enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
88. COL22A1 COL22A1 4473 3.249 0.793 - 0.886 - 0.794 - 0.776 - -
89. smyd2b ENSDARG00000005629 8181 3.228 0.891 - - - 0.842 0.729 - - 0.766 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
90. cav3 ENSDARG00000024141 14906 3.219 0.816 - - 0.771 0.854 - 0.778 - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
91. znf106a ENSDARG00000016651 6049 3.216 0.849 - - - 0.858 - 0.739 - 0.770 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
92. jph1b ENSDARG00000038826 7416 3.202 - - 0.830 0.804 0.716 - - 0.852 - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
93. tmem161a ENSDARG00000012790 16094 3.193 0.935 - - 0.739 0.709 - - - 0.810 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
94. acta1a ENSDARG00000036371 137508 3.177 0.808 - - - - 0.754 0.807 0.808 - actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
95. klhl41b ENSDARG00000006757 10762 3.161 0.896 - - - - - 0.775 0.736 0.754 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
96. si:ch211-255p10.3 ENSDARG00000096616 8336 3.154 - - 0.780 0.739 - - - 0.761 0.874 si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
97. pvalb1 ENSDARG00000037789 121195 3.154 - - 0.743 0.738 - 0.782 - 0.891 - parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
98. nmrk2 ENSDARG00000067848 10293 3.149 - - 0.766 - 0.795 - 0.776 0.812 - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
99. myoz2a ENSDARG00000012311 1373 3.128 0.844 - 0.776 - - - 0.763 - 0.745 myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
100. BX324201.1 BX324201.1 3302 3.127 0.887 - 0.727 - - - 0.781 - 0.732

There are 534 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA