Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atp1a3a

Gene Name Gene ID Reads Annotation
atp1a3a ENSDARG00000018259 5393 ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]










Genes with expression patterns similar to atp1a3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atp1a3a ENSDARG00000018259 5393 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
2. dlb ENSDARG00000004232 5120 3.644 0.783 0.938 0.924 - - - 0.999 - - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
3. syt11a ENSDARG00000057913 1145 3.465 0.959 0.838 0.916 - - 0.752 - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
4. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 3.408 0.741 0.724 - - - 0.944 0.999 - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
5. aplp1 ENSDARG00000098368 2317 3.377 0.834 0.772 - - - 0.771 1.000 - - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
6. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 3.375 0.832 0.714 0.899 - - 0.930 - - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
7. gap43 ENSDARG00000099744 4114 3.367 0.795 0.829 - - - 0.861 - 0.882 - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
8. neurog1 ENSDARG00000056130 3924 3.297 0.865 0.806 - 0.702 - 0.924 - - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
9. scrt2 ENSDARG00000056175 4331 3.17 0.745 0.755 - - - 0.868 - 0.802 - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
10. sncb ENSDARG00000104945 8197 3.122 0.741 - - - 0.738 0.941 - 0.702 - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
11. cadm3 ENSDARG00000057013 1545 3.092 0.736 0.718 - 0.740 - 0.898 - - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
12. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.954 0.710 0.706 - - - 0.833 - 0.705 -
13. TUBB8P7 TUBB8P7 1353 2.858 0.903 0.971 - - - 0.984 - - -
14. nadl1.1 1200 2.787 0.932 0.909 - - - 0.946 - - - neural adhesion molecule L1.1, transcript variant X1
15. stx1b ENSDARG00000000503 2724 2.774 0.949 0.893 - - - 0.932 - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
16. scn8aa ENSDARG00000005775 792 2.766 0.900 0.925 - - - 0.941 - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
17. ing4 ENSDARG00000030716 5908 2.725 - - - - - 0.763 0.990 - 0.972 inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
18. stmn2b ENSDARG00000070537 1586 2.718 0.940 0.868 - - - 0.910 - - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
19. myt1b ENSDARG00000102879 5411 2.71 0.925 0.898 - - - 0.887 - - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
20. pcsk1nl ENSDARG00000076170 1232 2.704 0.992 0.946 - - - 0.766 - - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
21. celf4 ENSDARG00000070045 1537 2.694 0.843 - - - - 0.888 - - 0.963 CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
22. nova2 ENSDARG00000017673 7685 2.688 0.823 0.901 - - - 0.964 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
23. scn2b ENSDARG00000101713 796 2.686 0.922 0.818 - - - 0.946 - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
24. cplx2l ENSDARG00000018997 3975 2.679 0.938 0.831 0.910 - - - - - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
25. TUBB8P7_1 TUBB8P7_1 2722 2.662 0.928 0.823 - - - 0.911 - - -
26. scrt1a ENSDARG00000100821 2687 2.643 - - - - - 0.958 - 0.707 0.978 scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
27. rheb ENSDARG00000090213 1432 2.639 0.943 0.754 - - - 0.942 - - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
28. sox2 ENSDARG00000070913 2763 2.638 0.765 0.907 - - - - - - 0.966 SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
29. slc18a3a ENSDARG00000006356 1285 2.636 0.877 0.845 - - - 0.914 - - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
30. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.632 0.884 0.846 - - - 0.902 - - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
31. gfap ENSDARG00000025301 5584 2.63 0.826 - 0.925 - - 0.879 - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
32. sox19b ENSDARG00000040266 532 2.621 0.938 0.802 - - - 0.881 - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
33. SKOR2 SKOR2 1041 2.616 0.845 0.905 - - - 0.866 - - -
34. CHL1 CHL1 1553 2.616 0.753 0.934 - - - 0.929 - - -
35. glrbb ENSDARG00000052769, ENSDARG00000113828 467 2.595 0.870 0.794 - - - 0.931 - - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
36. UBE2QL1 ENSDARG00000079276 3474 2.595 0.773 - - - - 0.859 - - 0.963 ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
37. dbx2 2971 2.591 0.889 0.769 - - - 0.933 - - - developing brain homeobox 2
38. snap25a ENSDARG00000020609 4537 2.591 0.835 0.844 - - - 0.912 - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
39. slc32a1 ENSDARG00000059775 1092 2.589 0.735 0.960 - - - 0.894 - - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
40. map1aa ENSDARG00000059601 599 2.585 0.872 0.749 - - - 0.964 - - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
41. pax6a ENSDARG00000103379 3061 2.583 0.883 0.726 - - - 0.974 - - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
42. gng3 ENSDARG00000009553 2530 2.576 0.864 0.763 - - - 0.949 - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
43. pcdh1gc5 ENSDARG00000104826 10052 2.573 0.875 0.833 - - - 0.865 - - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
44. si:ch211-152f6.6 si:ch211-152f6.6 278 2.548 0.883 0.775 - - - 0.890 - - -
45. gnao1a ENSDARG00000016676 8184 2.545 0.916 0.801 - - - - - 0.828 - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
46. nell2b ENSDARG00000062797 854 2.543 - 0.845 - - - 0.974 - 0.724 - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
47. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 2.541 0.802 - - - - 0.766 - - 0.973 zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
48. adam23a ENSDARG00000062323 580 2.54 0.715 0.945 - - - 0.880 - - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
49. nes ENSDARG00000088805 2710 2.539 0.786 0.852 - - - 0.901 - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
50. MAP1A MAP1A 847 2.534 0.875 0.799 - - - 0.860 - - -
51. rab39b rab39b 449 2.523 0.726 0.870 - - - 0.927 - - -
52. BX957337.1 BX957337.1 1685 2.52 0.915 0.824 - - - 0.781 - - -
53. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.516 0.815 0.900 - - - 0.801 - - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
54. mir10d-1 mir10d-1 860 2.505 0.870 0.830 - - - 0.805 - - -
55. slc1a2b ENSDARG00000102453 3136 2.502 0.845 0.733 - - - 0.924 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
56. jag1a ENSDARG00000030289 1275 2.495 0.760 0.870 - - - 0.865 - - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
57. ELOVL4 ELOVL4 3026 2.493 0.857 0.705 0.931 - - - - - -
58. slc1a3a ENSDARG00000104431 9888 2.489 0.839 0.766 - - - 0.884 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
59. rbfox3 rbfox3 1443 2.476 0.704 0.797 - - - 0.975 - - -
60. vamp2 ENSDARG00000056877 2158 2.471 0.820 0.705 - - - 0.946 - - - vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
61. zic4 ENSDARG00000031307 1228 2.469 0.776 0.887 - - - 0.806 - - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
62. stmn2a ENSDARG00000033234 2272 2.469 0.839 0.883 - - - 0.747 - - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
63. scdb ENSDARG00000030265 271 2.468 0.836 0.883 - - - 0.749 - - - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
64. kcnc3a ENSDARG00000055855 1821 2.464 0.773 0.736 - - - 0.955 - - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
65. atp1b4 ENSDARG00000053262 1337 2.46 0.835 0.879 - - - 0.746 - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
66. cnrip1a ENSDARG00000091683 1491 2.458 0.856 0.858 - - - - - 0.744 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
67. sv2bb ENSDARG00000060711 196 2.457 0.802 0.876 - - - 0.779 - - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
68. rtn1b ENSDARG00000021143 1682 2.454 0.886 0.733 - - - 0.835 - - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
69. CABZ01029822.1 ENSDARG00000086931 1654 2.449 0.845 0.889 - - - 0.715 - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
70. atp2b3b ENSDARG00000023445 1424 2.449 0.735 0.990 - - - 0.724 - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
71. dpysl5a ENSDARG00000011141 1827 2.442 0.724 0.926 - - - 0.792 - - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
72. AGO1 ENSDARG00000092644 4521 2.437 0.796 0.713 - - - 0.928 - - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
73. dla ENSDARG00000010791 9281 2.435 0.875 0.799 0.761 - - - - - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
74. nmnat2 ENSDARG00000004580 370 2.435 0.761 0.854 - - - 0.820 - - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
75. dpysl3 ENSDARG00000002587 4381 2.435 0.765 0.704 - - - 0.966 - - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
76. hes6 ENSDARG00000019335 4754 2.428 0.785 0.798 - - - 0.845 - - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
77. C7H4orf48 C7H4orf48 1455 2.424 0.846 - - - - 0.790 - 0.788 -
78. ptprnb ENSDARG00000077047 2743 2.411 0.732 0.924 - - - 0.755 - - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
79. TUSC5 TUSC5 1436 2.411 0.751 0.915 - - - 0.745 - - -
80. dbn1 ENSDARG00000069113 4527 2.398 0.705 - - - - 0.718 - - 0.975 drebrin 1 [Source:ZFIN;Acc:ZDB-GENE-091204-284]
81. lgi2a ENSDARG00000111069 965 2.392 0.747 0.734 - - - 0.911 - - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
82. st18 663 2.385 - 0.908 - - - 0.754 - 0.723 - suppression of tumorigenicity 18, zinc finger
83. SV2B SV2B 208 2.382 0.788 0.818 - - - 0.776 - - -
84. CU928222.1 ENSDARG00000097436 1662 2.378 0.728 0.883 - - - 0.767 - - -
85. amph ENSDARG00000007663 599 2.377 0.778 0.818 - - - 0.781 - - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
86. nbeaa ENSDARG00000070080 862 2.375 0.818 - - - - 0.846 - 0.711 - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
87. ZFHX3 ENSDARG00000103057 7759 2.35 0.780 - - - - 0.858 - 0.712 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
88. thsd7a thsd7a 194 2.329 0.767 0.769 - - - 0.793 - - -
89. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 2.319 0.710 0.818 - - - 0.791 - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
90. nrarpb ENSDARG00000018958 6225 2.293 0.703 0.710 - - - 0.880 - - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
91. vdac1 ENSDARG00000045132 8051 2.281 0.776 - - - - 0.778 - 0.727 - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
92. nrn1a ENSDARG00000071860 1311 2.253 0.782 0.701 - - - 0.770 - - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
93. rap2ip rap2ip 681 2.241 0.706 - - - - 0.823 - 0.712 -
94. mnx2b ENSDARG00000030350 484 2.24 0.752 0.707 - - - 0.781 - - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
95. gad2 ENSDARG00000015537 724 2.204 0.736 0.723 - - - 0.745 - - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
96. ebf3 ebf3 4238 2.169 0.755 0.711 - 0.703 - - - - -
97. MAF1 ENSDARG00000013122 6899 1.924 - - 0.925 - - - 0.999 - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
98. PRKAR2B ENSDARG00000036446 812 1.908 - - - - - 0.945 - - 0.963 protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
99. nefmb ENSDARG00000043697 2052 1.899 0.929 - - - - 0.970 - - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
100. BSN BSN 463 1.894 0.977 - - - - 0.917 - - -

There are 1810 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA