Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atm

Gene Name Gene ID Reads Annotation
atm ENSDARG00000002385 510 ATM serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-040809-1]










Genes with expression patterns similar to atm

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atm ENSDARG00000002385 510 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATM serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-040809-1]
2. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.587 - - - - - 0.748 0.839 - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
3. enoph1 ENSDARG00000026198, ENSDARG00000111634, ENSDARG00000114318 1305 1.548 - - - - - 0.776 0.772 - - enolase-phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-73]
4. dnal1 ENSDARG00000034042 339 1.546 - - - - - 0.772 0.774 - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
5. TMEM128 552 1.536 - - - - - 0.743 0.793 - - transmembrane protein 128
6. ift52 ENSDARG00000045025 606 1.484 - - - - - 0.756 0.728 - - intraflagellar transport 52 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-3]
7. sumo3a ENSDARG00000028119 13447 1.466 - - - - - 0.727 0.739 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
8. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.461 - - - 0.748 - - 0.713 - - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
9. khsrp ENSDARG00000026489 15738 1.458 - - - - - 0.713 0.745 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
10. si:dkeyp-53d3.6 204 1.443 - - - - - 0.728 0.715 - - si:dkeyp-53d3.6, transcript variant X1
11. ubp1 ENSDARG00000018000 1047 1.431 - - - - - 0.723 0.708 - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
12. PROCA1 ENSDARG00000069823 343 1.423 - 0.722 - - - 0.701 - - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
13. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.417 - - - - - 0.716 0.701 - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
14. dtnbb ENSDARG00000013020 280 1.411 - - - 0.709 - 0.702 - - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
15. zhx2 zhx2 365 1.409 - - - 0.702 - 0.707 - - -
16. lrig2 ENSDARG00000078561, ENSDARG00000116750 2559 1.402 0.701 - - - - 0.701 - - - leucine-rich repeats and immunoglobulin-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-041111-75]
17. creld2 ENSDARG00000029071, ENSDARG00000116264 333 0.915 - - - - - - 0.915 - - cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]
18. dbf4 ENSDARG00000074796 489 0.893 - - - - - - 0.893 - - DBF4 zinc finger [Source:ZFIN;Acc:ZDB-GENE-091020-13]
19. PMFBP1 ENSDARG00000101917 292 0.875 - - - - - - 0.875 - - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
20. pus3 ENSDARG00000028976 52 0.866 - - - - - - 0.866 - - pseudouridylate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9433]
21. CDC42SE2 ENSDARG00000094577, ENSDARG00000113403 606 0.864 - - - - - 0.864 - - - CDC42 small effector 2 [Source:ZFIN;Acc:ZDB-GENE-080204-45]
22. SMC6 ENSDARG00000091821 165 0.857 - - - - - 0.857 - - - structural maintenance of chromosomes 6 [Source:ZFIN;Acc:ZDB-GENE-110303-1]
23. efna2 efna2 428 0.852 - - - - - 0.852 - - -
24. pms2 ENSDARG00000075672, ENSDARG00000115929 248 0.852 - - - - - - 0.852 - - PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]
25. hcfc1b ENSDARG00000012519 3633 0.848 - - - - - 0.848 - - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
26. taf1b ENSDARG00000028937 879 0.846 - 0.846 - - - - - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
27. zgc:66484 ENSDARG00000030478 167 0.839 - - - - - 0.839 - - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
28. tulp4 tulp4 1520 0.839 0.839 - - - - - - - -
29. zgc:173726 ENSDARG00000077078 250 0.831 - - - - - - 0.831 - - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
30. rnaseh2a ENSDARG00000018891 1979 0.831 - - - - - - 0.831 - - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
31. meis3 ENSDARG00000002795 2509 0.83 - - - - - - 0.830 - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
32. si:dkey-6f10.3 ENSDARG00000093660 116 0.828 - - - - - 0.828 - - - si:dkey-6f10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-339]
33. ZNF337_10 ZNF337_10 183 0.827 - 0.827 - - - - - - -
34. pabpn1 ENSDARG00000045373 4876 0.825 - - - - - - 0.825 - - poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
35. col15a1b ENSDARG00000061848 398 0.825 - - - 0.825 - - - - - collagen, type XV, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-689]
36. ccnh ENSDARG00000007657 745 0.825 - - - - - 0.825 - - - cyclin H [Source:ZFIN;Acc:ZDB-GENE-050320-13]
37. kcnk5b ENSDARG00000012390 294 0.823 - 0.823 - - - - - - - potassium channel, subfamily K, member 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1297]
38. uhrf1 ENSDARG00000103409 3282 0.823 - - - - - 0.823 - - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
39. zswim5 ENSDARG00000055900 4243 0.823 - - - - - - 0.823 - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
40. rnaseh2b ENSDARG00000005128, ENSDARG00000111990, ENSDARG00000115076 391 0.823 - - - - - - 0.823 - - ribonuclease H2, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1090]
41. osbpl1a ENSDARG00000105147 42 0.822 - 0.822 - - - - - - - oxysterol binding protein-like 1A [Source:ZFIN;Acc:ZDB-GENE-050208-657]
42. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 0.821 - - - - - 0.821 - - - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
43. zgc:171489 ENSDARG00000052300 119 0.821 - - - - - 0.821 - - - zgc:171489 [Source:ZFIN;Acc:ZDB-GENE-080303-25]
44. med25 ENSDARG00000038005, ENSDARG00000115713 1305 0.821 - - - - - - 0.821 - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
45. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 0.821 - - - - - 0.821 - - - zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
46. mtx1a ENSDARG00000025500 275 0.819 - - - 0.819 - - - - - metaxin 1a [Source:ZFIN;Acc:ZDB-GENE-060606-2]
47. MAN2A2 ENSDARG00000063101 922 0.817 - - - - - 0.817 - - - mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
48. hint3 ENSDARG00000074286 1015 0.816 - - - - - 0.816 - - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
49. pex6 ENSDARG00000070958 323 0.816 - - - - - 0.816 - - - peroxisomal biogenesis factor 6 [Source:ZFIN;Acc:ZDB-GENE-081104-252]
50. zgc:112998 ENSDARG00000079760 380 0.816 - - - - - - 0.816 - - zgc:112998 [Source:ZFIN;Acc:ZDB-GENE-050320-134]
51. hoxd4a ENSDARG00000059276 1516 0.815 - - - - - 0.815 - - - homeobox D4a [Source:ZFIN;Acc:ZDB-GENE-980526-214]
52. mettl3 ENSDARG00000012827 728 0.815 - - - - - - 0.815 - - methyltransferase like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9498]
53. trps1 ENSDARG00000104082 918 0.815 - - - - - - 0.815 - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
54. usb1 ENSDARG00000003841 524 0.815 - - - - - 0.815 - - - U6 snRNA biogenesis 1 [Source:ZFIN;Acc:ZDB-GENE-040801-197]
55. dffa ENSDARG00000055770 294 0.815 - - - - - - 0.815 - - DNA fragmentation factor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040718-376]
56. h2afx ENSDARG00000029406 2116 0.813 - - - - - - 0.813 - - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
57. dnase2 ENSDARG00000073893 141 0.811 - - - - - - 0.811 - - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
58. si:dkey-10f21.16 si:dkey-10f21.16 252 0.81 - - - - - 0.810 - - -
59. si:dkeyp-117h8.4 ENSDARG00000043004 457 0.809 - - - - - - 0.809 - - si:dkeyp-117h8.4 [Source:ZFIN;Acc:ZDB-GENE-030804-4]
60. crim1 ENSDARG00000029668 118 0.809 0.809 - - - - - - - - cysteine rich transmembrane BMP regulator 1 (chordin-like) [Source:ZFIN;Acc:ZDB-GENE-040312-2]
61. exoc6 ENSDARG00000020521 1533 0.808 - - - - - - 0.808 - - exocyst complex component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-2511]
62. ephb2b ENSDARG00000021539 521 0.806 - - - - - - 0.806 - - eph receptor B2b [Source:ZFIN;Acc:ZDB-GENE-050522-415]
63. dbn1 ENSDARG00000069113 4527 0.805 - - - - - - 0.805 - - drebrin 1 [Source:ZFIN;Acc:ZDB-GENE-091204-284]
64. pla2g7 ENSDARG00000003584 365 0.805 - - - 0.805 - - - - - phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Source:ZFIN;Acc:ZDB-GENE-040426-2248]
65. nudt3b ENSDARG00000042123 311 0.804 - 0.804 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3b [Source:ZFIN;Acc:ZDB-GENE-041010-128]
66. ccdc6a ENSDARG00000043334, ENSDARG00000112924 1774 0.803 - - - - - 0.803 - - - coiled-coil domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-7848]
67. UNKL ENSDARG00000037838 1086 0.803 - - - - - 0.803 - - - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
68. map3k1 ENSDARG00000098405 3043 0.803 - - - - - 0.803 - - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
69. dynlt1 ENSDARG00000045909 2451 0.801 - - - - - - 0.801 - - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
70. ISM2 ISM2 1710 0.8 - - - - - 0.800 - - -
71. coq4 ENSDARG00000104733 402 0.798 - - - - - 0.798 - - - coenzyme Q4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-218]
72. si:dkey-239h2.3 ENSDARG00000092033 398 0.797 - - - - - - 0.797 - - si:dkey-239h2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-383]
73. klhl8 ENSDARG00000101270 1305 0.797 - - - - - - 0.797 - - kelch-like family member 8 [Source:ZFIN;Acc:ZDB-GENE-070209-226]
74. zgc:55764 zgc:55764 645 0.796 - - - 0.796 - - - - -
75. slc16a9b ENSDARG00000104687 826 0.795 - - - - - 0.795 - - - solute carrier family 16, member 9b [Source:ZFIN;Acc:ZDB-GENE-040801-69]
76. hcfc2 ENSDARG00000058127 490 0.795 - - - - - - 0.795 - - host cell factor C2 [Source:ZFIN;Acc:ZDB-GENE-050417-203]
77. ddb2 ENSDARG00000041140, ENSDARG00000114723 827 0.795 - - - - - 0.795 - - - damage-specific DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-169]
78. si:rp71-68n21.11 si:rp71-68n21.11 146 0.795 - - - - - 0.795 - - -
79. ctdspl2a ENSDARG00000061587 643 0.794 - 0.794 - - - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2a [Source:ZFIN;Acc:ZDB-GENE-061013-647]
80. tnfaip8 tnfaip8 1170 0.794 - - - - - 0.794 - - -
81. SNORA74 SNORA74 284 0.793 - - - - - - 0.793 - -
82. kifap3b ENSDARG00000006862 613 0.793 - - - - - 0.793 - - - kinesin-associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2219]
83. ap2b1 ENSDARG00000035152 2912 0.793 - - - - - 0.793 - - - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
84. flrt3 ENSDARG00000076895 3516 0.792 - - - - - 0.792 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
85. atp13a2 ENSDARG00000061890, ENSDARG00000117108 294 0.791 - - - - - 0.791 - - - ATPase cation transporting 13A2 [Source:ZFIN;Acc:ZDB-GENE-061215-126]
86. CLDND1 CLDND1 155 0.791 - - - - - - 0.791 - -
87. plagl2 ENSDARG00000076657 2057 0.79 - - - - - 0.790 - - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
88. CABZ01054394.3 CABZ01054394.3 60 0.79 - 0.790 - - - - - - -
89. GPR89A ENSDARG00000077983 463 0.79 - - - - - - 0.790 - - G protein-coupled receptor 89A [Source:HGNC Symbol;Acc:HGNC:31984]
90. mtfr1 ENSDARG00000045304 277 0.79 - 0.790 - - - - - - - mitochondrial fission regulator 1 [Source:ZFIN;Acc:ZDB-GENE-041212-86]
91. il17rd ENSDARG00000098359 1153 0.79 - - - - - 0.790 - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
92. rasa1a ENSDARG00000035535 2007 0.789 - - - - - 0.789 - - - RAS p21 protein activator (GTPase activating protein) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4694]
93. arhgap11a ENSDARG00000100019 1642 0.789 - - - - - 0.789 - - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
94. coro1b ENSDARG00000008660 1220 0.789 - - - - - 0.789 - - - coronin, actin binding protein, 1B [Source:ZFIN;Acc:ZDB-GENE-040123-3]
95. CPNE8_1 CPNE8_1 140 0.788 - - - - - - 0.788 - -
96. narf ENSDARG00000024184, ENSDARG00000110086 240 0.788 - - - - - - 0.788 - - nuclear prelamin A recognition factor [Source:ZFIN;Acc:ZDB-GENE-040718-31]
97. arhgef7a ENSDARG00000006299, ENSDARG00000114088 1627 0.788 - - - - - 0.788 - - - Rho guanine nucleotide exchange factor (GEF) 7a [Source:ZFIN;Acc:ZDB-GENE-060322-11]
98. SNORA62 SNORA62 39 0.787 - 0.787 - - - - - - -
99. iqce ENSDARG00000089930 163 0.785 - - - - - - 0.785 - - IQ motif containing E [Source:ZFIN;Acc:ZDB-GENE-090312-217]
100. mrpl1 ENSDARG00000054606, ENSDARG00000114027 1457 0.785 - - - - - 0.785 - - - mitochondrial ribosomal protein L1 [Source:ZFIN;Acc:ZDB-GENE-060526-311]

There are 632 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA