Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for atl3

Gene Name Gene ID Reads Annotation
atl3 ENSDARG00000004270 2806 atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]










Genes with expression patterns similar to atl3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atl3 ENSDARG00000004270 2806 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
2. crtap ENSDARG00000018010 7722 3.252 0.909 - - - - - 0.782 0.761 0.800 cartilage associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-2619]
3. cylda ENSDARG00000060058 768 2.873 0.988 0.991 - - - 0.894 - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
4. FAM110D FAM110D 3632 2.824 0.952 0.905 - - - - 0.967 - -
5. ube2v1 ENSDARG00000041875 5739 2.804 0.943 0.976 - - 0.885 - - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
6. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 2.761 - - - - - 0.857 0.948 0.956 - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
7. eif5 ENSDARG00000003681 7986 2.72 0.934 0.987 - - - 0.799 - - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
8. cant1a ENSDARG00000012192 1324 2.708 0.983 - - 0.846 - - - 0.879 - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
9. ildr1a ENSDARG00000103929 2390 2.695 0.936 - - - - 0.781 - 0.978 - immunoglobulin-like domain containing receptor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1412]
10. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 2.678 - 0.974 - - - 0.732 0.972 - - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
11. ddr2l ENSDARG00000103830 1921 2.652 - 0.988 - - - 0.702 - 0.962 - discoidin domain receptor family, member 2, like [Source:ZFIN;Acc:ZDB-GENE-041210-162]
12. cenpe ENSDARG00000063385 4428 2.65 - 0.988 - - 0.957 0.705 - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
13. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 2.644 - - - 0.788 0.923 - - 0.933 - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
14. zgc:163030 ENSDARG00000069192 2963 2.628 - - - 0.747 - 0.920 0.961 - - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
15. myo6a ENSDARG00000044016 847 2.566 0.989 - - 0.708 - 0.869 - - - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
16. tmem45b ENSDARG00000056239 2395 2.521 - 0.907 - - - 0.914 - - 0.700 transmembrane protein 45B [Source:ZFIN;Acc:ZDB-GENE-040426-1904]
17. EML4_1 EML4_1 8736 2.451 - - - - - 0.807 0.837 0.807 -
18. ENSDARG00000058255 ENSDARG00000058255 1715 2.366 - - - 0.722 - 0.711 0.933 - -
19. tspan7 ENSDARG00000015759 13891 2.291 0.708 0.877 - - - - 0.706 - - tetraspanin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5435]
20. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 2.19 - - - - - 0.737 0.706 0.747 - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
21. sema3gb ENSDARG00000013607 1531 1.968 - 0.984 - - - - - 0.984 - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb [Source:ZFIN;Acc:ZDB-GENE-050513-4]
22. CABZ01079427.1 CABZ01079427.1 1682 1.956 0.985 - - - - - 0.971 - -
23. tmem181 ENSDARG00000045910 2288 1.954 - 0.986 - - - - 0.968 - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
24. smurf1 ENSDARG00000016086 878 1.943 - - - - 0.972 - 0.971 - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
25. fgfr3 ENSDARG00000004782, ENSDARG00000114756 1791 1.939 0.980 - - - - - 0.959 - - fibroblast growth factor receptor 3 [Source:ZFIN;Acc:ZDB-GENE-000816-1]
26. abcb7 ENSDARG00000062795 1404 1.936 - 0.981 - - - - 0.955 - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
27. AKAP2 AKAP2 4178 1.935 - 0.989 - - - - - 0.946 -
28. pan3 ENSDARG00000031637, ENSDARG00000111004 613 1.93 - - - - 0.974 - 0.956 - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
29. zgc:63587 ENSDARG00000017140 8399 1.923 0.977 - - - - - 0.946 - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
30. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 1.922 - - - - 0.975 - - 0.947 - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
31. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.921 0.972 - - - - - 0.949 - - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
32. s100u ENSDARG00000071014 4754 1.919 - 0.966 - - - - - 0.953 - S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
33. glyr1 ENSDARG00000099213 6906 1.91 - 0.958 - - - - 0.952 - - glyoxylate reductase 1 homolog (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-041121-5]
34. si:dkey-193p11.2 ENSDARG00000096712 3500 1.906 - 0.986 - - - - 0.920 - - si:dkey-193p11.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8407]
35. uqcrfs1 ENSDARG00000007745 4654 1.902 - 0.985 - - - - 0.917 - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
36. fermt1 ENSDARG00000052652 2394 1.895 - - - - - - 0.921 0.974 - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
37. si:ch211-150o23.2 ENSDARG00000092746 788 1.895 - - - - 0.972 0.923 - - - si:ch211-150o23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-386]
38. ABI3_1 ABI3_1 511 1.894 - - - - - 0.919 0.975 - -
39. NFATC3 NFATC3 1712 1.89 - - - - - 0.932 - 0.958 -
40. eif5b ENSDARG00000016548 3972 1.89 - 0.963 - - 0.927 - - - - eukaryotic translation initiation factor 5B [Source:ZFIN;Acc:ZDB-GENE-050208-20]
41. s100v1 ENSDARG00000070427 6633 1.889 - - - - - 0.962 - 0.927 - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
42. rpz5 ENSDARG00000075718 1703 1.889 - - - - - - 0.926 0.963 - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
43. mcts1 ENSDARG00000025972 4662 1.887 - - - - 0.947 - - 0.940 - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
44. fbln2 ENSDARG00000015156 1694 1.881 0.968 - - - - - 0.913 - - fibulin 2 [Source:ZFIN;Acc:ZDB-GENE-060711-1]
45. cpne1 ENSDARG00000075536 4063 1.873 0.958 0.915 - - - - - - - copine I [Source:ZFIN;Acc:ZDB-GENE-030131-3562]
46. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.871 0.936 - - - - - 0.935 - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
47. calm2b 3890 1.87 - 0.986 - - - - 0.884 - - calmodulin 2b, (phosphorylase kinase, delta)
48. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.864 - - - - 0.940 - 0.924 - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
49. lamb4 ENSDARG00000039133 1220 1.859 - - - - - 0.891 0.968 - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
50. prkcda ENSDARG00000009208 1508 1.859 - - - - - 0.914 0.945 - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
51. hoxc3a ENSDARG00000070339 3379 1.858 - 0.978 - - - - 0.880 - - homeobox C3a [Source:ZFIN;Acc:ZDB-GENE-980526-532]
52. h1fx ENSDARG00000054058 4075 1.858 - - - - 0.953 - - 0.905 - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
53. psmb6 ENSDARG00000002240 8015 1.855 - - - - 0.963 0.892 - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
54. srsf5b ENSDARG00000027734 6996 1.853 0.946 - - - - - 0.907 - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
55. actr2a ENSDARG00000052438 5838 1.851 0.928 - - - - 0.923 - - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
56. adipor1b ENSDARG00000042717 1348 1.848 - - - - - 0.867 0.981 - - adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
57. dhrs13b ENSDARG00000031814, ENSDARG00000097019, ENSDARG00000111081 1792 1.847 0.932 - - - - 0.915 - - - dehydrogenase/reductase (SDR family) member 13b [Source:ZFIN;Acc:ZDB-GENE-040801-253]
58. brd4 ENSDARG00000078904 5367 1.847 0.959 - - - - 0.888 - - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
59. cux1b ENSDARG00000043134 641 1.846 - - - - - 0.897 0.949 - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
60. fitm2 ENSDARG00000034568, ENSDARG00000112035 1717 1.844 - 0.979 - - - 0.865 - - - fat storage-inducing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-050508-5]
61. pvrl1b 1645 1.843 - - - - - 0.866 - 0.977 - poliovirus receptor-related 1b
62. zgc:101569 ENSDARG00000038876 1525 1.84 - - - - - 0.867 - 0.973 - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
63. si:ch73-367f21.4 ENSDARG00000071097 862 1.84 0.987 - - - - 0.853 - - - si:ch73-367f21.4 [Source:ZFIN;Acc:ZDB-GENE-120214-27]
64. CABZ01084815.1 CABZ01084815.1 351 1.839 - - - - - 0.879 0.960 - -
65. casc5 1487 1.839 - - - - 0.968 0.871 - - - cancer susceptibility candidate 5, transcript variant X3
66. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 1.837 0.894 0.943 - - - - - - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
67. dnajb9a ENSDARG00000052072 578 1.834 - - - - - 0.879 0.955 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
68. slc25a5 ENSDARG00000092553 626 1.833 0.989 - - 0.844 - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
69. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.829 - - - - - 0.860 0.969 - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
70. tpd52l2b ENSDARG00000013655 9460 1.828 - - - - - - 0.951 0.877 - tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
71. slc25a42 ENSDARG00000099368 2420 1.819 - - - - - 0.861 - 0.958 - solute carrier family 25, member 42 [Source:ZFIN;Acc:ZDB-GENE-060825-313]
72. NDUFA3 ENSDARG00000041400 7939 1.819 - 0.961 - - - - 0.858 - - NADH:ubiquinone oxidoreductase subunit A3 [Source:ZFIN;Acc:ZDB-GENE-040801-18]
73. acn9 acn9 520 1.816 - - - - - 0.867 0.949 - -
74. grk5 ENSDARG00000032801 490 1.814 - - - - - 0.845 0.969 - - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
75. gltscr2 gltscr2 5763 1.81 - 0.956 - - - - 0.854 - -
76. rab11al ENSDARG00000014340 2116 1.809 - - - - - 0.838 0.971 - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
77. NBEAL1 ENSDARG00000099547 1112 1.808 - - - - - 0.849 0.959 - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
78. snap29 ENSDARG00000038518 1609 1.804 - - - - - 0.848 - 0.956 - synaptosomal-associated protein 29 [Source:ZFIN;Acc:ZDB-GENE-041111-226]
79. ik ENSDARG00000004161 3132 1.802 - - - - - 0.868 0.934 - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
80. krcp ENSDARG00000040224 5961 1.801 0.946 - - - - - 0.855 - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
81. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 1.8 0.987 - - 0.813 - - - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
82. mcl1a ENSDARG00000009779 2058 1.798 - - - - - 0.863 0.935 - - MCL1, BCL2 family apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-7]
83. si:dkey-87o1.2 ENSDARG00000095796 6602 1.793 - 0.887 - - - - 0.906 - - si:dkey-87o1.2 [Source:ZFIN;Acc:ZDB-GENE-110411-217]
84. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.792 0.988 - - - - 0.804 - - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
85. wu:fc34e06 1793 1.792 - - - - - 0.831 0.961 - - wu:fc34e06, transcript variant X10
86. gdap2 ENSDARG00000021569 1013 1.791 0.960 - - - - 0.831 - - - ganglioside induced differentiation associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-31]
87. alox12 ENSDARG00000069463 5787 1.789 - - - - - 0.957 0.832 - - arachidonate 12-lipoxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-1452]
88. ef1 1343 1.789 - - - - - 0.850 0.939 - - E74-like factor 1 (ets domain transcription factor), transcript variant X4
89. nrg2a ENSDARG00000077818 854 1.787 - - - 0.816 - - 0.971 - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
90. frmd6 ENSDARG00000002332 2698 1.785 - - - - - 0.823 - 0.962 - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
91. gsna ENSDARG00000011459, ENSDARG00000115062, ENSDARG00000116084 1623 1.783 0.983 - - - - 0.800 - - - gelsolin a [Source:ZFIN;Acc:ZDB-GENE-030131-9653]
92. CACHD1 ENSDARG00000061590 1287 1.777 - - - - - 0.828 0.949 - - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
93. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 1.775 - - - - - 0.808 - 0.967 - carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
94. rac2 ENSDARG00000038010 5837 1.775 - - - - - 0.895 - 0.880 - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
95. BX511245.1 ENSDARG00000096871 7523 1.773 - 0.949 - - - - 0.824 - -
96. bmp4 ENSDARG00000019995 2038 1.772 - - - 0.812 - - - 0.960 - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
97. tmem203 ENSDARG00000104996 1182 1.771 - - - - - 0.818 0.953 - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
98. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 1.769 - - - - 0.975 0.794 - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
99. sema4e ENSDARG00000052997 607 1.763 0.989 - - 0.774 - - - - - semaphorin 4e [Source:ZFIN;Acc:ZDB-GENE-990715-7]
100. gpx7 ENSDARG00000091511 3045 1.763 - - - - - 0.846 - 0.917 - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]

There are 2061 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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