Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for atl1

Gene Name Gene ID Reads Annotation
atl1 ENSDARG00000060481 251 atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]










Genes with expression patterns similar to atl1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atl1 ENSDARG00000060481 251 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
2. adarb1a ENSDARG00000041609 476 3.332 0.714 - - - 0.783 0.961 0.874 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
3. her8a ENSDARG00000016363 996 2.953 0.743 - - - - 0.727 0.724 0.759 - hairy-related 8a [Source:ZFIN;Acc:ZDB-GENE-030131-2376]
4. nxph1 ENSDARG00000033447 182 2.715 - 0.946 - - - 0.949 0.820 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
5. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.7 0.831 - - - - 0.976 0.893 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
6. spock2 ENSDARG00000075393 791 2.672 0.833 - - - - 0.962 0.877 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
7. stmn1b ENSDARG00000033655 9491 2.66 0.823 - - - - 0.978 0.859 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
8. TUSC5 TUSC5 1436 2.639 0.854 - - - - 0.944 0.841 - -
9. pcsk2 ENSDARG00000019451 442 2.628 0.864 1.000 - - - 0.764 - - - proprotein convertase subtilisin/kexin type 2 [Source:ZFIN;Acc:ZDB-GENE-090608-1]
10. pnoca ENSDARG00000025024 467 2.617 0.822 - - - - 0.980 0.815 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
11. slc1a1 ENSDARG00000020212 104 2.611 - 1.000 - - - 0.892 0.719 - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
12. stmn2a ENSDARG00000033234 2272 2.605 0.789 - - - - 0.955 0.861 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
13. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.601 0.804 - - - - 0.925 0.872 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
14. mdkb ENSDARG00000020708 5393 2.594 0.792 - - - - 0.967 0.835 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
15. nptx1l ENSDARG00000074671 569 2.589 0.895 - - - - 0.950 0.744 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
16. ATP6AP1L ATP6AP1L 164 2.587 0.806 1.000 - - - - 0.781 - -
17. lhx5 ENSDARG00000057936 785 2.582 0.830 - - - - 0.941 0.811 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
18. slc32a1 ENSDARG00000059775 1092 2.58 0.877 - - - - 0.851 0.852 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
19. mapk12b ENSDARG00000006409 2246 2.578 0.769 - - - - 0.945 0.864 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
20. notch1b ENSDARG00000052094 7874 2.561 0.718 - - - - 0.950 0.893 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
21. sez6l2 ENSDARG00000076052 360 2.549 0.771 - - - - 0.948 0.830 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
22. atp6ap1a ENSDARG00000041417 898 2.547 0.806 - - - - 0.967 0.774 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
23. gap43 ENSDARG00000099744 4114 2.535 0.829 - - - - 0.871 0.835 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
24. tuba2 ENSDARG00000045014 1490 2.534 0.774 - - - - 0.959 0.801 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
25. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.533 0.822 - - - - 0.832 0.879 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
26. MAP6 MAP6 643 2.526 0.818 - - - - 0.907 0.801 - -
27. nadl1.2 695 2.526 0.841 - - - - 0.927 0.758 - - neural adhesion molecule L1.2, transcript variant X1
28. upf3a ENSDARG00000069297, ENSDARG00000111067 196 2.526 0.787 - - - - 0.922 0.817 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
29. eno2 ENSDARG00000014287 2162 2.521 0.779 - - - - 0.931 0.811 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
30. MAP1A MAP1A 847 2.519 0.812 - - - - 0.872 0.835 - -
31. nrn1a ENSDARG00000071860 1311 2.517 0.777 - - - - 0.946 0.794 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
32. necap1 ENSDARG00000020798 612 2.516 0.842 - - - - 0.855 0.819 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
33. zic1 ENSDARG00000015567 2520 2.516 0.834 - - - - 0.941 0.741 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
34. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.515 0.849 - - - - 0.781 0.885 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
35. plp1a ENSDARG00000103732 3544 2.506 0.770 - - - - 0.909 0.827 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
36. slc1a3a ENSDARG00000104431 9888 2.504 0.823 - - - - 0.883 0.798 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
37. slc1a2b ENSDARG00000102453 3136 2.502 0.845 - - - - 0.814 0.843 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
38. ZFHX3 ENSDARG00000103057 7759 2.499 0.819 - - - - 0.787 0.893 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
39. snap25a ENSDARG00000020609 4537 2.499 0.837 - - - - 0.841 0.821 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
40. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.497 0.732 - - - - 0.928 0.837 - -
41. dpysl4 ENSDARG00000103490 534 2.496 0.763 - - - - 0.906 0.827 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
42. atpv0e2 ENSDARG00000059057 585 2.489 0.744 - - - - 0.949 0.796 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
43. atp2b3b ENSDARG00000023445 1424 2.489 0.775 - - - - 0.958 0.756 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
44. pcdh1gc5 ENSDARG00000104826 10052 2.488 0.758 - - - - 0.900 0.830 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
45. tuba1c ENSDARG00000055216 8384 2.484 0.770 - - - - 0.840 0.874 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
46. sox2 ENSDARG00000070913 2763 2.48 0.753 - - - - 0.949 0.778 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
47. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.476 0.762 - - - - 0.862 0.852 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
48. amph ENSDARG00000007663 599 2.474 0.806 - - - - 0.799 0.869 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
49. efna2 efna2 428 2.464 0.752 - - - - 0.809 - 0.903 -
50. rap2ip rap2ip 681 2.462 0.785 - - - - 0.828 0.849 - -
51. zic4 ENSDARG00000031307 1228 2.46 0.832 - - - - 0.906 0.722 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
52. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.46 0.779 - - - - 0.962 0.719 - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
53. cadm3 ENSDARG00000057013 1545 2.457 0.788 - - - - 0.862 0.807 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
54. cers6 ENSDARG00000053583 247 2.45 0.764 - - - - 0.874 0.812 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
55. SH2B2 ENSDARG00000090421 245 2.447 - - - - - 0.747 0.759 0.941 - SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
56. PPFIA3 ENSDARG00000077053 310 2.447 0.707 - - - - 0.918 0.822 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
57. STMN3 ENSDARG00000038465 1009 2.445 0.876 - - - - 0.700 0.869 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
58. SGIP1 SGIP1 236 2.443 0.751 - - - - 0.942 0.750 - -
59. adam11 ENSDARG00000079204 298 2.441 0.844 - - - - 0.790 0.807 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
60. sh3gl2 sh3gl2 1305 2.441 0.764 - - - - 0.830 0.847 - -
61. nrxn2a ENSDARG00000061454 291 2.433 0.769 - - - - 0.849 0.815 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
62. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.428 0.725 - - - - 0.876 0.827 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
63. SV2B SV2B 208 2.427 0.751 - - - - 0.869 0.807 - -
64. snap25b ENSDARG00000058117 469 2.425 0.791 - - - - 0.786 0.848 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
65. rab3ab ENSDARG00000043835 1267 2.421 0.738 - - - - 0.834 0.849 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
66. syt9a ENSDARG00000003994 298 2.42 0.725 - - - - 0.968 0.727 - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
67. stx1b ENSDARG00000000503 2724 2.42 0.793 - - - - 0.761 0.866 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
68. nrcam nrcam 397 2.415 0.742 - - - - 0.925 0.748 - -
69. gabra5 ENSDARG00000070730 156 2.414 0.706 - - - - 0.862 0.846 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
70. adcyap1b ENSDARG00000027740 1539 2.411 0.834 - - - - 0.856 0.721 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
71. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.411 0.756 - - - - 0.834 0.821 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
72. scn8aa ENSDARG00000005775 792 2.407 0.760 - - - - 0.790 0.857 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
73. TUBB8P7_1 TUBB8P7_1 2722 2.407 0.764 - - - - 0.826 0.817 - -
74. stmn2b ENSDARG00000070537 1586 2.403 0.761 - - - - 0.852 0.790 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
75. mllt11 ENSDARG00000071026 2518 2.402 0.756 - - - - 0.858 0.788 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
76. xkr6 xkr6 286 2.396 - 0.714 - - - 0.922 0.760 - -
77. fez1 ENSDARG00000023174 701 2.373 0.714 - - - - 0.845 0.814 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
78. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.367 0.735 - - - - 0.884 0.748 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
79. syn1 ENSDARG00000060368, ENSDARG00000111164 397 2.366 0.703 - - - - 0.846 0.817 - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
80. ptpn5 ENSDARG00000074866 548 2.364 0.813 - - - - 0.713 0.838 - - protein tyrosine phosphatase, non-receptor type 5 [Source:ZFIN;Acc:ZDB-GENE-101028-3]
81. layna ENSDARG00000035169 515 2.357 - - - - 0.706 0.806 0.845 - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
82. cldn5a ENSDARG00000043716 3865 2.35 0.749 - - - - 0.803 0.798 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
83. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 2.349 0.751 - - - - 0.809 0.789 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
84. zic5 ENSDARG00000016022 1034 2.339 0.743 - - - - 0.879 0.717 - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
85. hoxc1a ENSDARG00000070337 1460 2.338 0.719 - - - - 0.892 0.727 - - homeobox C1a [Source:ZFIN;Acc:ZDB-GENE-000822-2]
86. add2 ENSDARG00000074581 1402 2.331 0.721 - - - - 0.809 0.801 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
87. stmn4l ENSDARG00000043932 654 2.33 0.738 - - - - 0.778 0.814 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
88. pou4f1 ENSDARG00000005559 821 2.322 0.787 - - - - 0.711 0.824 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
89. MAPK8IP1_1 MAPK8IP1_1 186 2.316 0.754 - - - - 0.790 0.772 - -
90. Sep-03 Sep-03 1124 2.315 0.756 - - - - 0.829 0.730 - -
91. hnrnpub ENSDARG00000004735 16496 2.281 0.708 - - - - 0.758 0.815 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
92. nmnat2 ENSDARG00000004580 370 2.278 0.760 - - - - 0.796 0.722 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
93. calb1 ENSDARG00000031598 252 2.272 0.723 - - - - 0.749 0.800 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
94. prrt1 ENSDARG00000062208 368 2.27 0.747 - - - - 0.718 0.805 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
95. sox14 ENSDARG00000070929 352 2.262 0.727 0.714 - - - - 0.821 - - SRY (sex determining region Y)-box 14 [Source:ZFIN;Acc:ZDB-GENE-051113-268]
96. vgf ENSDARG00000105529 247 2.26 0.708 - - - - 0.749 0.803 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
97. nrxn3b ENSDARG00000062693 192 2.188 0.701 - - - - 0.785 0.702 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
98. ank2b ENSDARG00000043313 3065 2.168 0.719 0.705 - - - - 0.744 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
99. hoxd3a ENSDARG00000059280 1919 2.162 0.704 - - - - 0.710 0.748 - - homeobox D3a [Source:ZFIN;Acc:ZDB-GENE-990415-120]
100. CR936337.1 CR936337.1 38 1.938 - 1.000 - - - - - 0.938 -

There are 2824 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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