Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atg4c

Gene Name Gene ID Reads Annotation
atg4c ENSDARG00000044373 979 autophagy related 4C, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040625-84]










Genes with expression patterns similar to atg4c

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atg4c ENSDARG00000044373 979 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 autophagy related 4C, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040625-84]
2. cmah ENSDARG00000057714 852 2.441 0.920 0.789 - - - 0.732 - - - cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:ZFIN;Acc:ZDB-GENE-040704-33]
3. rnd1 rnd1 1086 2.37 - 0.784 - - - 0.855 - 0.731 -
4. MLLT1 MLLT1 349 1.814 0.904 - - - - 0.910 - - -
5. ck2b ck2b 781 1.794 0.958 0.836 - - - - - - -
6. mnd1 ENSDARG00000074451 182 1.793 0.957 - - - - 0.836 - - - meiotic nuclear divisions 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-116]
7. pole ENSDARG00000058533, ENSDARG00000115430 381 1.777 0.965 - - - - 0.812 - - - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
8. fem1b ENSDARG00000062636 474 1.763 - 0.867 - - - 0.896 - - - fem-1 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-071009-3]
9. atg10 ENSDARG00000104846 85 1.724 - 0.860 - - - 0.864 - - - ATG10 autophagy related 10 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051030-72]
10. baiap2l1a ENSDARG00000029305 30 1.718 0.959 0.759 - - - - - - - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
11. abcb7 ENSDARG00000062795 1404 1.717 0.798 - - - - 0.919 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 7 [Source:ZFIN;Acc:ZDB-GENE-050517-10]
12. CR387996.1 ENSDARG00000097774 3037 1.706 0.950 - - - - 0.756 - - -
13. larp6 1695 1.702 0.900 0.802 - - - - - - - La ribonucleoprotein domain family, member 6
14. taf12 ENSDARG00000104030, ENSDARG00000115004 163 1.694 0.950 0.744 - - - - - - - TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-031030-5]
15. ppp4r2a ENSDARG00000026540 1782 1.674 0.902 - - - - 0.772 - - - protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
16. fzd7b ENSDARG00000027589 2562 1.673 0.946 - - - - 0.727 - - - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
17. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 1.667 0.948 0.719 - - - - - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
18. pou5f3 ENSDARG00000044774 212 1.666 0.960 0.706 - - - - - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
19. aff2 ENSDARG00000052242 540 1.665 0.923 0.742 - - - - - - - AF4/FMR2 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-110411-190]
20. tmem160 ENSDARG00000069649 587 1.65 0.904 0.746 - - - - - - - transmembrane protein 160 [Source:ZFIN;Acc:ZDB-GENE-060503-851]
21. slc20a1b ENSDARG00000010641 2564 1.648 0.924 - - - - - 0.724 - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
22. MYH9 MYH9 158 1.646 0.940 - - - - - - 0.706 -
23. med6 ENSDARG00000034734 2711 1.63 0.790 0.840 - - - - - - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
24. nfatc3b ENSDARG00000051729 239 1.63 - 0.760 - - - 0.870 - - - nuclear factor of activated T cells 3b [Source:ZFIN;Acc:ZDB-GENE-100922-25]
25. tnfaip3 ENSDARG00000027777 1066 1.625 - 0.913 - - - 0.712 - - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
26. gpx8 ENSDARG00000013302 1427 1.621 0.890 0.731 - - - - - - - glutathione peroxidase 8 (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-965]
27. gtpbp10 ENSDARG00000040300 533 1.618 0.889 - - - - 0.729 - - - GTP-binding protein 10 (putative) [Source:ZFIN;Acc:ZDB-GENE-040718-153]
28. rangap1a ENSDARG00000041317 1456 1.605 - - - - - 0.875 0.730 - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
29. BX004890.2 BX004890.2 84 1.603 - 0.734 - - - 0.869 - - -
30. gnsa ENSDARG00000023766 545 1.583 - 0.856 - - - 0.727 - - - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
31. parp3 ENSDARG00000003961 146 1.582 - 0.725 - - - 0.857 - - - poly (ADP-ribose) polymerase family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7435]
32. sigmar1 ENSDARG00000011418 1240 1.568 0.839 - - - - - - - 0.729 sigma non-opioid intracellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1006]
33. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 1.554 - 0.822 - - - 0.732 - - - inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
34. fscn1a ENSDARG00000059680 3999 1.553 - - - - - 0.772 0.781 - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
35. rca2.1 ENSDARG00000056075 3410 1.542 - 0.768 - - - - 0.774 - - regulator of complement activation group 2 gene 1 [Source:ZFIN;Acc:ZDB-GENE-050320-60]
36. mgat3 mgat3 195 1.53 - 0.725 - - - 0.805 - - -
37. hoxc6b ENSDARG00000101954 967 1.528 - - - - - 0.787 0.741 - - homeobox C6b [Source:ZFIN;Acc:ZDB-GENE-000822-1]
38. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.525 - 0.778 - - - 0.747 - - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
39. fam155a ENSDARG00000075858 91 1.523 - 0.740 - - - 0.783 - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
40. adnp2b ENSDARG00000028431 4683 1.518 - - - - - 0.711 0.807 - - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
41. GPR64 GPR64 58 1.517 - 0.811 - - - 0.706 - - -
42. slit2 ENSDARG00000004246 5277 1.514 0.790 - - - - - 0.724 - - slit homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-3]
43. ppp6r2b ENSDARG00000069654 323 1.507 - 0.756 - - - - - 0.751 - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
44. TMEM185A TMEM185A 5505 1.496 - - - - - 0.784 0.712 - -
45. pkib ENSDARG00000053110 527 1.495 - 0.716 - - - 0.779 - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
46. sin3ab ENSDARG00000059812 2140 1.489 - - - - - 0.766 0.723 - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
47. efna2 efna2 428 1.489 - 0.770 - - - 0.719 - - -
48. wu:fb30e12 wu:fb30e12 1254 1.488 - 0.760 - - - 0.728 - - -
49. mkrn4 ENSDARG00000028295 2768 1.471 0.704 - - - - 0.767 - - - makorin, ring finger protein, 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5954]
50. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 1.47 - 0.728 - - - 0.742 - - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
51. stmn4 ENSDARG00000030106 518 1.456 - 0.702 - - - 0.754 - - - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
52. bmp4 ENSDARG00000019995 2038 1.452 0.751 - - - - 0.701 - - - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
53. zgc:113348 ENSDARG00000103795 1351 1.445 - - - - - 0.704 0.741 - - zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
54. depdc5 ENSDARG00000078105 745 1.445 - 0.730 - - - 0.715 - - - DEP domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-091204-356]
55. stk36 ENSDARG00000061095 113 1.441 - 0.719 - - - - - 0.722 - serine/threonine kinase 36 (fused homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030912-6]
56. ptprk ENSDARG00000063416 742 1.438 - - - - - 0.714 - 0.724 - protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
57. chrnb2b ENSDARG00000017790 155 1.427 - 0.714 - - - 0.713 - - - cholinergic receptor, nicotinic, beta 2b [Source:ZFIN;Acc:ZDB-GENE-070821-3]
58. rbmx ENSDARG00000014244 3445 1.421 0.712 - - - - 0.709 - - - RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
59. slc2a6 ENSDARG00000058731 103 1.414 - - - - - 0.705 - 0.709 - solute carrier family 2 (facilitated glucose transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-081104-301]
60. si:dkey-183n20.2 si:dkey-183n20.2 210 1.413 - - - - - 0.710 - 0.703 -
61. myo1ea ENSDARG00000036179 891 0.97 0.970 - - - - - - - - myosin IE, a [Source:ZFIN;Acc:ZDB-GENE-030131-5127]
62. ap2m1b ENSDARG00000033899 317 0.97 0.970 - - - - - - - - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
63. mff ENSDARG00000053753 905 0.966 0.966 - - - - - - - - mitochondrial fission factor [Source:ZFIN;Acc:ZDB-GENE-040426-1510]
64. plekhg7 ENSDARG00000062855 308 0.964 0.964 - - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
65. gne ENSDARG00000099771 617 0.964 0.964 - - - - - - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1848]
66. C22H19orf26 C22H19orf26 66 0.963 0.963 - - - - - - - -
67. PRSS23 ENSDARG00000055786 564 0.962 0.962 - - - - - - - - serine protease 23 [Source:ZFIN;Acc:ZDB-GENE-030131-9149]
68. CABZ01020207.1 CABZ01020207.1 145 0.961 0.961 - - - - - - - -
69. zgc:173726 ENSDARG00000077078 250 0.961 0.961 - - - - - - - - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
70. EPHA2 EPHA2 867 0.96 0.960 - - - - - - - -
71. si:dkey-164n2.1 47 0.96 0.960 - - - - - - - - si:dkey-164n2.1, transcript variant X1
72. me3 ENSDARG00000002305 3305 0.96 0.960 - - - - - - - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
73. brf1a ENSDARG00000017835 206 0.96 0.960 - - - - - - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
74. si:ch211-229b6.1 ENSDARG00000093422 151 0.96 0.960 - - - - - - - - si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
75. RFESD_1 RFESD_1 65 0.96 0.960 - - - - - - - -
76. rspry1 ENSDARG00000062558 1424 0.959 0.959 - - - - - - - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
77. moxd1 ENSDARG00000031136, ENSDARG00000111773 112 0.959 0.959 - - - - - - - - monooxygenase, DBH-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9320]
78. C17H14orf1 C17H14orf1 256 0.958 0.958 - - - - - - - -
79. cyr61 ENSDARG00000023062 1213 0.958 0.958 - - - - - - - - cysteine-rich, angiogenic inducer, 61 [Source:ZFIN;Acc:ZDB-GENE-040426-3]
80. itgb1b ENSDARG00000104484 51 0.957 0.957 - - - - - - - - integrin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-030909-10]
81. TMEM151A ENSDARG00000077986 78 0.957 0.957 - - - - - - - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
82. tvp23b ENSDARG00000057060 361 0.957 0.957 - - - - - - - - trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-404]
83. ppfibp2a ENSDARG00000061977 199 0.957 0.957 - - - - - - - - PTPRF interacting protein, binding protein 2a (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-070705-277]
84. si:dkey-58f10.12 ENSDARG00000092680 258 0.957 0.957 - - - - - - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
85. si:dkey-7i1.4 si:dkey-7i1.4 77 0.957 0.957 - - - - - - - -
86. si:ch211-191a16.5 ENSDARG00000096545 45 0.957 0.957 - - - - - - - - si:ch211-191a16.5 [Source:ZFIN;Acc:ZDB-GENE-121214-56]
87. TMEM220 ENSDARG00000088981 28 0.957 0.957 - - - - - - - - transmembrane protein 220 [Source:ZFIN;Acc:ZDB-GENE-131121-194]
88. C8H9orf64 C8H9orf64 640 0.956 0.956 - - - - - - - -
89. kcnk5b ENSDARG00000012390 294 0.956 0.956 - - - - - - - - potassium channel, subfamily K, member 5b [Source:ZFIN;Acc:ZDB-GENE-040426-1297]
90. rnf152 ENSDARG00000087782 141 0.956 0.956 - - - - - - - - ring finger protein 152 [Source:ZFIN;Acc:ZDB-GENE-050327-84]
91. CU468896.2 CU468896.2 38 0.956 0.956 - - - - - - - -
92. dgat1a ENSDARG00000103503 63 0.955 0.955 - - - - - - - - diacylglycerol O-acyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4600]
93. exd3 ENSDARG00000063140 119 0.955 0.955 - - - - - - - - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
94. gusb ENSDARG00000063126 867 0.955 0.955 - - - - - - - - glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
95. si:ch211-209a2.1 250 0.955 0.955 - - - - - - - - si:ch211-209a2.1, transcript variant X2
96. TMEM55B TMEM55B 76 0.955 0.955 - - - - - - - -
97. asb6 ENSDARG00000007125 389 0.955 0.955 - - - - - - - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
98. stm ENSDARG00000035694 1567 0.955 0.955 - - - - - - - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
99. lyst ENSDARG00000008575, ENSDARG00000113634 55 0.955 0.955 - - - - - - - - lysosomal trafficking regulator [Source:ZFIN;Acc:ZDB-GENE-070702-1]
100. zgc:101562 ENSDARG00000040179 90 0.955 0.955 - - - - - - - - zgc:101562 [Source:ZFIN;Acc:ZDB-GENE-041010-74]

There are 1870 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA