Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atg4b

Gene Name Gene ID Reads Annotation
atg4b ENSDARG00000052104 758 autophagy related 4B, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040917-3]










Genes with expression patterns similar to atg4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atg4b ENSDARG00000052104 758 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 autophagy related 4B, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040917-3]
2. stxbp2 ENSDARG00000007603 1646 2.402 - - - 0.746 - - 0.726 - 0.930 syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
3. cep170a cep170a 652 1.947 0.998 - - - - - - - 0.949
4. cd2ap ENSDARG00000015224 2830 1.902 0.978 - - - - - - - 0.924 CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
5. arf6b ENSDARG00000052928 4585 1.843 0.966 - - - - - - - 0.877 ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
6. kras ENSDARG00000010844 2885 1.836 0.977 - - - - - - - 0.859 v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040808-67]
7. ARHGEF5 2727 1.831 0.958 - - - - - 0.873 - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
8. renbp ENSDARG00000008931 1848 1.828 0.962 - 0.866 - - - - - - renin binding protein [Source:ZFIN;Acc:ZDB-GENE-041212-34]
9. esrp2 ENSDARG00000018814, ENSDARG00000115061 1198 1.808 0.998 - - - - - - - 0.810 epithelial splicing regulatory protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9824]
10. zgc:113333 ENSDARG00000038242 797 1.795 - 0.816 - - - - - - 0.979 zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]
11. rims2a ENSDARG00000101606 1088 1.765 0.991 - - 0.774 - - - - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
12. si:dkey-83k24.5 ENSDARG00000093019 506 1.758 0.966 - - - - - 0.792 - - si:dkey-83k24.5 [Source:ZFIN;Acc:ZDB-GENE-081104-440]
13. coro2a ENSDARG00000005210 1479 1.752 - - - - - 0.826 - - 0.926 coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
14. dhrs3b ENSDARG00000044803 2931 1.74 - - - - - - 0.767 - 0.973 dehydrogenase/reductase (SDR family) member 3b [Source:ZFIN;Acc:ZDB-GENE-041010-172]
15. HDAC5 ENSDARG00000075139 1287 1.736 0.998 - - - - - 0.738 - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
16. CREM CREM 1333 1.733 0.987 - - 0.746 - - - - -
17. numb ENSDARG00000027279 2905 1.723 0.955 - - - - 0.768 - - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
18. CPAMD8 ENSDARG00000056530 3481 1.719 - - - - - - 0.794 - 0.925 C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
19. fgf8a ENSDARG00000003399 580 1.715 - - - - - - 0.752 - 0.963 fibroblast growth factor 8a [Source:ZFIN;Acc:ZDB-GENE-990415-72]
20. vcana ENSDARG00000103515 611 1.71 - - - - - - 0.756 - 0.954 versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
21. he2 945 1.706 0.961 - - - - - 0.745 - - hatching enzyme 2
22. get4 ENSDARG00000024398 1818 1.69 0.988 - - - - 0.702 - - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
23. sparc ENSDARG00000019353 38281 1.685 0.970 - - - - - - - 0.715 secreted protein, acidic, cysteine-rich (osteonectin) [Source:ZFIN;Acc:ZDB-GENE-030131-9]
24. pdcd6ip ENSDARG00000025269 2522 1.683 - - - - - - 0.820 - 0.863 programmed cell death 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2678]
25. mmp9 ENSDARG00000042816 298 1.675 - - - - - - 0.703 - 0.972 matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
26. sar1b ENSDARG00000103403 1699 1.67 - - - 0.702 - - - - 0.968 secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
27. ube2v1 ENSDARG00000041875 5739 1.655 0.952 - - - - - - - 0.703 ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
28. atp6ap1b ENSDARG00000037153 3970 1.648 - - - - - 0.725 - - 0.923 ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
29. si:dkey-97i18.5 si:dkey-97i18.5 1362 1.648 0.818 - 0.830 - - - - - -
30. dhrs13b ENSDARG00000031814, ENSDARG00000097019, ENSDARG00000111081 1792 1.633 0.911 - 0.722 - - - - - - dehydrogenase/reductase (SDR family) member 13b [Source:ZFIN;Acc:ZDB-GENE-040801-253]
31. cwc25 ENSDARG00000003382 2134 1.627 - - - 0.795 - - 0.832 - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
32. megf6a ENSDARG00000079199 103 1.599 - 0.810 - - - - 0.789 - - multiple EGF-like-domains 6a [Source:ZFIN;Acc:ZDB-GENE-090312-12]
33. NCKAP1L ENSDARG00000075748 129 1.593 - 0.788 - - - - 0.805 - - NCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]
34. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.585 - - - - - - 0.762 - 0.823 transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
35. tpbga ENSDARG00000099609 1051 1.578 - - - 0.736 - - 0.842 - - trophoblast glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-030827-4]
36. dcaf12 ENSDARG00000063155 697 1.576 - - - 0.820 - - 0.756 - - DDB1 and CUL4 associated factor 12 [Source:ZFIN;Acc:ZDB-GENE-061013-363]
37. cyp26c1 ENSDARG00000056029 1426 1.575 - - - - - - 0.759 - 0.816 cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
38. si:dkey-56e3.2 ENSDARG00000092551 835 1.571 - - - - - - 0.812 - 0.759 si:dkey-56e3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-316]
39. nme3 ENSDARG00000100990 3889 1.571 - - - - - 0.717 - - 0.854 NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
40. dlx3b ENSDARG00000014626 3647 1.556 - - - - - - 0.700 - 0.856 distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
41. VAV2 ENSDARG00000044718, ENSDARG00000114652 422 1.538 - 0.786 - - - 0.752 - - - vav 2 guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-091204-420]
42. bbs4 ENSDARG00000063522 247 1.535 - - - 0.748 - - 0.787 - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
43. taldo1 ENSDARG00000103369 3804 1.526 - - - - - 0.720 - - 0.806 transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
44. vps26b ENSDARG00000015823, ENSDARG00000116682 1023 1.525 - - - 0.744 - - 0.781 - - VPS26, retromer complex component B [Source:ZFIN;Acc:ZDB-GENE-040426-2699]
45. CU570791.5 CU570791.5 872 1.523 - - - 0.728 - - 0.795 - -
46. tmem258 ENSDARG00000078785 9578 1.52 - - - - - - 0.718 - 0.802 transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
47. nsd1a ENSDARG00000060016 2974 1.52 - - - 0.798 - - - - 0.722 nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
48. si:dkey-95p16.2 ENSDARG00000093484 3413 1.519 - - - - - 0.764 0.755 - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
49. fam151b ENSDARG00000020024 255 1.508 - 0.731 - 0.777 - - - - - family with sequence similarity 151, member B [Source:ZFIN;Acc:ZDB-GENE-040801-38]
50. dpf2 ENSDARG00000012219 666 1.497 - 0.712 - 0.785 - - - - - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
51. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 1.496 - - - - - 0.793 - 0.703 - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
52. gskip ENSDARG00000038099 5059 1.495 - - 0.774 - - 0.721 - - - gsk3b interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2777]
53. cldni ENSDARG00000054616, ENSDARG00000111133 16328 1.493 - - - - - - 0.707 - 0.786 claudin i [Source:ZFIN;Acc:ZDB-GENE-010328-9]
54. helz ENSDARG00000030560 3259 1.477 - - - 0.746 - - - - 0.731 helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
55. gpd1c ENSDARG00000036942 869 1.472 - - - - - 0.731 0.741 - - glycerol-3-phosphate dehydrogenase 1c [Source:ZFIN;Acc:ZDB-GENE-040426-2576]
56. ajuba ENSDARG00000077842 1152 1.471 - 0.704 - - - - 0.767 - - ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
57. lig4 ENSDARG00000060620 369 1.468 - - 0.714 - - - 0.754 - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
58. rnf150a ENSDARG00000024827 1903 1.462 - - - 0.746 - 0.716 - - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
59. CT574587.1 ENSDARG00000097915 383 1.452 - - 0.714 0.738 - - - - -
60. fn1b ENSDARG00000006526 9542 1.442 - - - - - 0.716 0.726 - - fibronectin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-6545]
61. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 1.417 - - 0.713 - - 0.704 - - - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
62. RNF214 RNF214 816 1 1.000 - - - - - - - -
63. daam2 ENSDARG00000028393 226 1 1.000 - - - - - - - - dishevelled associated activator of morphogenesis 2 [Source:ZFIN;Acc:ZDB-GENE-070709-1]
64. SUSD4 ENSDARG00000026335 195 1 1.000 - - - - - - - - sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
65. phf12a ENSDARG00000074303 1025 0.999 0.999 - - - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
66. bbs5 ENSDARG00000039827 211 0.999 0.999 - - - - - - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
67. mta3 ENSDARG00000054903, ENSDARG00000113436 353 0.999 0.999 - - - - - - - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
68. si:ch73-367f21.4 ENSDARG00000071097 862 0.999 0.999 - - - - - - - - si:ch73-367f21.4 [Source:ZFIN;Acc:ZDB-GENE-120214-27]
69. lyz ENSDARG00000057789, ENSDARG00000109290, ENSDARG00000114098 5991 0.999 0.999 - - - - - - - - lysozyme [Source:ZFIN;Acc:ZDB-GENE-020515-2]
70. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.999 0.999 - - - - - - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
71. dhcr7 ENSDARG00000103226 673 0.999 0.999 - - - - - - - - 7-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-030912-9]
72. tmem194a tmem194a 745 0.999 0.999 - - - - - - - -
73. rnf168 ENSDARG00000112483 594 0.999 0.999 - - - - - - - - ring finger protein 168 [Source:ZFIN;Acc:ZDB-GENE-030131-6013]
74. slc22a2 ENSDARG00000030530 313 0.999 0.999 - - - - - - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
75. gbx1 ENSDARG00000071418 871 0.999 0.999 - - - - - - - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
76. zyx ENSDARG00000075733 429 0.999 0.999 - - - - - - - - zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]
77. chst14 ENSDARG00000043011 345 0.999 0.999 - - - - - - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [Source:ZFIN;Acc:ZDB-GENE-040401-3]
78. ino80db ENSDARG00000062226 504 0.999 0.999 - - - - - - - - INO80 complex subunit Db [Source:ZFIN;Acc:ZDB-GENE-070112-2072]
79. sh3gl3b ENSDARG00000007302 573 0.998 0.998 - - - - - - - - SH3-domain GRB2-like 3b [Source:ZFIN;Acc:ZDB-GENE-040121-4]
80. BX682552.2 BX682552.2 1427 0.998 0.998 - - - - - - - -
81. scinla ENSDARG00000102415, ENSDARG00000117110 1996 0.998 0.998 - - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
82. cpped1 ENSDARG00000031968, ENSDARG00000112438 693 0.998 0.998 - - - - - - - - calcineurin-like phosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-118]
83. nr2f1b ENSDARG00000017168 1487 0.998 0.998 - - - - - - - - nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
84. fbxo45 ENSDARG00000071492, ENSDARG00000111553 732 0.998 0.998 - - - - - - - - F-box protein 45 [Source:ZFIN;Acc:ZDB-GENE-040426-1450]
85. sema4e ENSDARG00000052997 607 0.998 0.998 - - - - - - - - semaphorin 4e [Source:ZFIN;Acc:ZDB-GENE-990715-7]
86. dcp1b ENSDARG00000045484 534 0.998 0.998 - - - - - - - - decapping mRNA 1B [Source:ZFIN;Acc:ZDB-GENE-040819-1]
87. cylda ENSDARG00000060058 768 0.998 0.998 - - - - - - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
88. tctex1d1 ENSDARG00000103545 409 0.998 0.998 - - - - - - - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
89. dnajc11 1939 0.998 0.998 - - - - - - - - DnaJ heat shock protein family (Hsp40) member C11
90. ercc4 ENSDARG00000014161 2167 0.998 0.998 - - - - - - - - excision repair cross-complementation group 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5533]
91. mocs2 ENSDARG00000077202, ENSDARG00000114592, ENSDARG00000114882 942 0.998 0.998 - - - - - - - - molybdenum cofactor synthesis 2 [Source:ZFIN;Acc:ZDB-GENE-110411-53]
92. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 0.997 0.997 - - - - - - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
93. eef2a.1 ENSDARG00000042094 1781 0.997 0.997 - - - - - - - - eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
94. ghitm 1443 0.997 0.997 - - - - - - - - growth hormone inducible transmembrane protein
95. bfsp2 ENSDARG00000011998 295 0.997 0.997 - - - - - - - - beaded filament structural protein 2, phakinin [Source:ZFIN;Acc:ZDB-GENE-041212-58]
96. AL935029.1 AL935029.1 514 0.997 0.997 - - - - - - - -
97. itm2ca ENSDARG00000043448 1265 0.997 0.997 - - - - - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
98. slc25a5 ENSDARG00000092553 626 0.997 0.997 - - - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
99. pfkfb4l pfkfb4l 2539 0.997 0.997 - - - - - - - -
100. apip ENSDARG00000003132 1212 0.997 0.997 - - - - - - - - APAF1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040912-128]

There are 1335 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA