Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atg4a

Gene Name Gene ID Reads Annotation
atg4a ENSDARG00000014531 481 autophagy related 4A, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-430]










Genes with expression patterns similar to atg4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atg4a ENSDARG00000014531 481 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 autophagy related 4A, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-430]
2. BX927294.1 BX927294.1 361 2.491 - 0.824 - 0.882 - 0.785 - - -
3. HDX ENSDARG00000079382 513 1.85 - - 0.994 0.856 - - - - - highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
4. dhx34 ENSDARG00000061168 349 1.842 0.847 - 0.995 - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:ZFIN;Acc:ZDB-GENE-061207-30]
5. ube4b ENSDARG00000037017 8012 1.832 - - 0.973 0.859 - - - - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
6. ap1g2 ENSDARG00000054337, ENSDARG00000116382 374 1.813 - 0.911 - 0.902 - - - - - adaptor related protein complex 1 subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030616-587]
7. tnfaip3 ENSDARG00000027777 1066 1.808 - - 0.995 - - - 0.813 - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
8. foxd1 ENSDARG00000029179 726 1.801 - - 0.996 - 0.805 - - - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
9. chst13 chst13 669 1.774 - - 0.972 - - - 0.802 - -
10. APBA3 APBA3 852 1.745 0.757 - 0.988 - - - - - -
11. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.739 - 0.861 - 0.878 - - - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
12. ARMCX3 ARMCX3 328 1.713 0.718 - 0.995 - - - - - -
13. egln2 ENSDARG00000062562 2500 1.697 - - 0.991 - 0.706 - - - - egl-9 family hypoxia-inducible factor 2 [Source:ZFIN;Acc:ZDB-GENE-060503-757]
14. ly75 ENSDARG00000053113 196 1.691 - - - - 0.768 - 0.923 - - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
15. wnk1b ENSDARG00000039392 3587 1.69 - - 0.973 - - 0.717 - - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
16. nab2 ENSDARG00000078076 108 1.686 0.776 - - 0.910 - - - - - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
17. MSL1_1 MSL1_1 2365 1.662 - - 0.959 - - 0.703 - - -
18. si:ch73-44m9.2 ENSDARG00000094821 101 1.645 - - - 0.921 0.724 - - - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
19. med22 ENSDARG00000014148 1307 1.568 - - - 0.815 - - 0.753 - - mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
20. efnb1 ENSDARG00000007723, ENSDARG00000116351 1595 1.559 - - - 0.755 - - 0.804 - - ephrin-B1 [Source:ZFIN;Acc:ZDB-GENE-010618-2]
21. fam222bb ENSDARG00000078578 779 1.541 - - - - 0.781 - 0.760 - - family with sequence similarity 222, member Bb [Source:ZFIN;Acc:ZDB-GENE-110419-4]
22. rfwd2 740 1.539 - - - 0.824 - - 0.715 - - ring finger and WD repeat domain 2, transcript variant X1
23. acsl4l acsl4l 540 1.533 0.760 - - 0.773 - - - - -
24. fmnl3 ENSDARG00000004372 821 1.532 - - - 0.752 - - 0.780 - - formin-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1571]
25. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 1.526 - 0.765 - - 0.761 - - - - ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
26. OVOL1 75 1.522 - 0.787 - 0.735 - - - - - ovo-like zinc finger 1, transcript variant X1
27. USP31 ENSDARG00000074017 628 1.517 - 0.782 - - 0.735 - - - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
28. lrrc32 ENSDARG00000040621 348 1.505 0.744 - - - 0.761 - - - - leucine rich repeat containing 32 [Source:ZFIN;Acc:ZDB-GENE-090630-1]
29. tnfaip8l3 ENSDARG00000088709 345 1.503 - 0.725 - 0.778 - - - - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
30. creg2 ENSDARG00000000666 643 1.5 - 0.705 - 0.795 - - - - - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
31. hivep1 ENSDARG00000103658 345 1.484 0.711 - - - - - 0.773 - - human immunodeficiency virus type I enhancer binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-512]
32. wbscr22 wbscr22 644 1.483 - - - 0.782 0.701 - - - -
33. cdca5 ENSDARG00000044437 2041 1.479 - - - - 0.714 - 0.765 - - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
34. SMC6 ENSDARG00000091821 165 1.475 0.713 - - - 0.762 - - - - structural maintenance of chromosomes 6 [Source:ZFIN;Acc:ZDB-GENE-110303-1]
35. tango6 ENSDARG00000034001 203 1.466 - - - - 0.741 - 0.725 - - transport and golgi organization 6 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050419-237]
36. SDK2 SDK2 145 1.454 - 0.725 - - - - 0.729 - -
37. ece1 ENSDARG00000061737 91 1.447 0.723 - - - - - 0.724 - - endothelin converting enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-061110-100]
38. PKN2 ENSDARG00000101293 358 0.998 - - 0.998 - - - - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
39. si:ch211-283l16.1 ENSDARG00000112586 131 0.997 - - 0.997 - - - - - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
40. brap ENSDARG00000008560 821 0.997 - - 0.997 - - - - - - BRCA1 associated protein [Source:ZFIN;Acc:ZDB-GENE-040718-168]
41. prr18 ENSDARG00000093768 409 0.997 - - 0.997 - - - - - - proline rich 18 [Source:ZFIN;Acc:ZDB-GENE-081107-6]
42. tmem194b tmem194b 724 0.997 - - 0.997 - - - - - -
43. CABZ01068153.1 CABZ01068153.1 211 0.997 - - 0.997 - - - - - -
44. s100a1 ENSDARG00000015543 274 0.996 - - 0.996 - - - - - - S100 calcium binding protein A1 [Source:ZFIN;Acc:ZDB-GENE-040916-1]
45. fam203a fam203a 570 0.996 - - 0.996 - - - - - -
46. rexo1 ENSDARG00000026986 770 0.996 - - 0.996 - - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
47. edn2 ENSDARG00000070578 276 0.996 - - 0.996 - - - - - - endothelin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-774]
48. rad18 ENSDARG00000027938 574 0.995 - - 0.995 - - - - - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
49. bbs2 ENSDARG00000041621, ENSDARG00000110124 321 0.995 - - 0.995 - - - - - - Bardet-Biedl syndrome 2 [Source:ZFIN;Acc:ZDB-GENE-020801-1]
50. clk2a ENSDARG00000062954 1890 0.995 - - 0.995 - - - - - - CDC-like kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-298]
51. SEMA4C ENSDARG00000079611 610 0.995 - - 0.995 - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:ZFIN;Acc:ZDB-GENE-080303-16]
52. pi4k2a ENSDARG00000033666 1257 0.994 - - 0.994 - - - - - - phosphatidylinositol 4-kinase type 2 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2675]
53. nr1h3 ENSDARG00000098439 859 0.994 - - 0.994 - - - - - - nuclear receptor subfamily 1, group H, member 3 [Source:ZFIN;Acc:ZDB-GENE-050410-7]
54. fdx1l 461 0.994 - - 0.994 - - - - - - ferredoxin 1-like
55. zgc:195001 ENSDARG00000070484 3281 0.994 - - 0.994 - - - - - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
56. thbs1b ENSDARG00000010785 3095 0.994 - - 0.994 - - - - - - thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708-1]
57. SON SON 510 0.994 - - 0.994 - - - - - -
58. dbf4 ENSDARG00000074796 489 0.994 - - 0.994 - - - - - - DBF4 zinc finger [Source:ZFIN;Acc:ZDB-GENE-091020-13]
59. cactin ENSDARG00000059866 553 0.994 - - 0.994 - - - - - - cactin [Source:ZFIN;Acc:ZDB-GENE-060503-322]
60. tbpl1 ENSDARG00000036868 711 0.993 - - 0.993 - - - - - - TBP-like 1 [Source:ZFIN;Acc:ZDB-GENE-040520-2]
61. hrasb ENSDARG00000005651 662 0.993 - - 0.993 - - - - - - -Ha-ras Harvey rat sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050522-466]
62. smg6 ENSDARG00000100481 493 0.993 - - 0.993 - - - - - - SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
63. flad1 ENSDARG00000070390 604 0.993 - - 0.993 - - - - - - flavin adenine dinucleotide synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-44]
64. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.993 - - 0.993 - - - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
65. xpc ENSDARG00000039754 515 0.992 - - 0.992 - - - - - - xeroderma pigmentosum, complementation group C [Source:ZFIN;Acc:ZDB-GENE-030131-8461]
66. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 0.992 - - 0.992 - - - - - - zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
67. TUSC3 ENSDARG00000078854 1021 0.992 - - 0.992 - - - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
68. zgc:113348 ENSDARG00000103795 1351 0.992 - - 0.992 - - - - - - zgc:113348 [Source:ZFIN;Acc:ZDB-GENE-050227-10]
69. ubl3b ENSDARG00000021556 1210 0.992 - - 0.992 - - - - - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
70. rbm39b ENSDARG00000041853 1421 0.992 - - 0.992 - - - - - - RNA binding motif protein 39b [Source:ZFIN;Acc:ZDB-GENE-050327-97]
71. nlk1 ENSDARG00000006566 1123 0.992 - - 0.992 - - - - - - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
72. srebf2 ENSDARG00000063438 1982 0.992 - - 0.992 - - - - - - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
73. BX323045.3 BX323045.3 1044 0.992 - - 0.992 - - - - - -
74. CABZ01087568.1 CABZ01087568.1 1487 0.991 - - 0.991 - - - - - -
75. klf5a 1072 0.991 - - 0.991 - - - - - - Kruppel-like factor 5a
76. ppie ENSDARG00000103234, ENSDARG00000111596 511 0.991 - - 0.991 - - - - - - peptidylprolyl isomerase E (cyclophilin E) [Source:ZFIN;Acc:ZDB-GENE-050417-167]
77. BX571768.1 ENSDARG00000116980 711 0.991 - - 0.991 - - - - - -
78. ints9 ENSDARG00000067913 600 0.991 - - 0.991 - - - - - - integrator complex subunit 9 [Source:ZFIN;Acc:ZDB-GENE-061013-129]
79. zmat5 ENSDARG00000035434 983 0.991 - - 0.991 - - - - - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
80. wu:fb52c12 wu:fb52c12 763 0.991 - - 0.991 - - - - - -
81. irf2a ENSDARG00000007387 915 0.99 - - 0.990 - - - - - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
82. pard6b ENSDARG00000003865 990 0.99 - - 0.990 - - - - - - par-6 partitioning defective 6 homolog beta (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090312-133]
83. wtip ENSDARG00000103607 797 0.99 - - 0.990 - - - - - - WT1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-050419-261]
84. si:dkey-71p21.9 si:dkey-71p21.9 603 0.99 - - 0.990 - - - - - -
85. hsbp1a ENSDARG00000069425 1086 0.99 - - 0.990 - - - - - - heat shock factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050320-136]
86. rspo2 ENSDARG00000079570, ENSDARG00000113124 1688 0.989 - - 0.989 - - - - - - R-spondin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-667]
87. TUBGCP6 1991 0.988 - - 0.988 - - - - - - tubulin, gamma complex associated protein 6
88. zgc:158309 zgc:158309 2696 0.988 - - 0.988 - - - - - -
89. dscr3 1229 0.987 - - 0.987 - - - - - - Down syndrome critical region 3
90. ARHGAP22 ENSDARG00000076434 1406 0.987 - - 0.987 - - - - - - Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
91. notch1a ENSDARG00000103554 498 0.987 - - 0.987 - - - - - - notch 1a [Source:ZFIN;Acc:ZDB-GENE-990415-173]
92. reep5 ENSDARG00000100742 1470 0.987 - - 0.987 - - - - - - receptor accessory protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9181]
93. CREB3L4 1085 0.987 - - 0.987 - - - - - - cAMP responsive element binding protein 3-like 4
94. zc3h18 ENSDARG00000062506 1676 0.987 - - 0.987 - - - - - - zinc finger CCCH-type containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-13]
95. agpat3 ENSDARG00000036549 1093 0.987 - - 0.987 - - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2765]
96. sort1a ENSDARG00000029402, ENSDARG00000117178 1480 0.987 - - 0.987 - - - - - - sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]
97. rybpb ENSDARG00000053459 1464 0.986 - - 0.986 - - - - - - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
98. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 0.986 - - 0.986 - - - - - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
99. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 0.986 - - 0.986 - - - - - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
100. hopx ENSDARG00000089368 2342 0.986 - - 0.986 - - - - - - HOP homeobox [Source:ZFIN;Acc:ZDB-GENE-031016-2]

There are 1246 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA