Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for atf3

Gene Name Gene ID Reads Annotation
atf3 ENSDARG00000007823 829 activating transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-728]










Genes with expression patterns similar to atf3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atf3 ENSDARG00000007823 829 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 activating transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-728]
2. eng1b eng1b 2544 1.624 - - - - - 0.761 0.863 - -
3. MCAM MCAM 1765 1.62 - - - - - 0.784 0.836 - -
4. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 1.615 - - - - - 0.789 0.826 - - protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
5. camk2d2 ENSDARG00000014273 2840 1.61 - - - - - 0.849 0.761 - - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-277]
6. nxn ENSDARG00000033978, ENSDARG00000115888 1683 1.607 - - - - - 0.899 0.708 - - nucleoredoxin [Source:ZFIN;Acc:ZDB-GENE-050522-75]
7. KCNA3 KCNA3 748 1.571 - - - - - 0.764 0.807 - -
8. ptdss1 ptdss1 1143 1.568 - 0.842 - - - - 0.726 - -
9. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 1.566 - - - - - 0.773 0.793 - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
10. ago4 ENSDARG00000100854 496 1.55 0.782 0.768 - - - - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
11. ppp2r5eb ENSDARG00000069118 1902 1.548 - 0.828 - - - - 0.720 - - protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
12. zgc:92113 1738 1.547 - 0.808 - - - - 0.739 - - zgc:92113
13. tmem47 ENSDARG00000057322 4691 1.537 - - - - - 0.782 0.755 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
14. cars ENSDARG00000036164 2019 1.536 - 0.712 - - - - - 0.824 - cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
15. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.532 - - - - - 0.810 0.722 - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
16. si:ch211-120j21.1 si:ch211-120j21.1 638 1.53 0.725 - - - - - 0.805 - -
17. ERBB4_1 ERBB4_1 1064 1.523 - 0.760 - - - - 0.763 - -
18. pvalb4 ENSDARG00000024433 35736 1.523 - - 0.715 - - - 0.808 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
19. orc1 ENSDARG00000039217, ENSDARG00000115400 795 1.522 0.799 - - - - - - 0.723 - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
20. CABZ01115322.1 CABZ01115322.1 1283 1.518 - 0.769 - - - 0.749 - - -
21. flt1 ENSDARG00000019371, ENSDARG00000111797 128 1.516 - - - - - 0.806 0.710 - - fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) [Source:ZFIN;Acc:ZDB-GENE-050407-1]
22. fa2h ENSDARG00000090063 1084 1.499 0.707 - - 0.792 - - - - - fatty acid 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031219-4]
23. PAQR4 PAQR4 2150 1.496 - - - 0.714 - - 0.782 - -
24. pmpca ENSDARG00000102607 1024 1.495 - 0.776 - - - - 0.719 - - peptidase (mitochondrial processing) alpha [Source:ZFIN;Acc:ZDB-GENE-030131-5809]
25. pou3f3a ENSDARG00000042032 2835 1.494 - 0.781 - - - 0.713 - - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
26. skap1 ENSDARG00000001498, ENSDARG00000114047 55 1.489 - 0.710 - - - 0.779 - - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
27. sertad2a ENSDARG00000093412 503 1.476 - - - - - 0.704 0.772 - - SERTA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050309-236]
28. rgl2 ENSDARG00000007727 1096 1.473 0.715 0.758 - - - - - - - ral guanine nucleotide dissociation stimulator-like 2 [Source:ZFIN;Acc:ZDB-GENE-010131-1]
29. tmem130 ENSDARG00000103789 756 1.466 - - - - - 0.701 0.765 - - transmembrane protein 130 [Source:ZFIN;Acc:ZDB-GENE-080204-23]
30. LYRM9 ENSDARG00000075528 329 1.464 - 0.754 - - - - - 0.710 - LYR motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-081022-28]
31. SH3D21 ENSDARG00000099448 1726 1.46 0.704 - - - - - - 0.756 - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
32. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 1.46 - 0.755 - 0.705 - - - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
33. actr1 ENSDARG00000011611 3879 1.458 - 0.717 - - - 0.741 - - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
34. GALNT16 ENSDARG00000053190 250 1.457 - - - - - 0.701 0.756 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-131120-189]
35. APH1A APH1A 129 1.454 - - - 0.753 - - 0.701 - -
36. usp49 ENSDARG00000000229 706 1.453 0.731 0.722 - - - - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
37. zgc:174877 ENSDARG00000079278 143 1.452 - 0.716 - - - 0.736 - - - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
38. tmem35 ENSDARG00000052567 5685 1.447 - 0.715 - - - 0.732 - - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
39. ALDH1L2 ENSDARG00000070230 2550 1.443 - - - - - 0.717 0.726 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
40. SMIM22 ENSDARG00000105068 246 1.439 - 0.735 - - - - - 0.704 - small integral membrane protein 22 [Source:HGNC Symbol;Acc:HGNC:48329]
41. fam129ba ENSDARG00000062970 1578 1.435 0.722 - - 0.713 - - - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
42. PRIMA1 PRIMA1 459 1.434 - - - - - 0.713 0.721 - -
43. rgs17 ENSDARG00000039435 590 1.432 - - - - - 0.731 0.701 - - regulator of G protein signaling 17 [Source:ZFIN;Acc:ZDB-GENE-040718-229]
44. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.415 - - - - - 0.705 0.710 - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
45. bcl2l10 ENSDARG00000026766 1426 1.409 0.706 - - - - 0.703 - - - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
46. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.408 - - 0.707 - - - 0.701 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
47. MARVELD3 ENSDARG00000099654 325 0.905 - - - - - - - 0.905 - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
48. CABZ01113191.1 CABZ01113191.1 388 0.898 - - - - - - 0.898 - -
49. esco2 ENSDARG00000014685 1971 0.894 - 0.894 - - - - - - - establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-156]
50. plcl1 ENSDARG00000067676 2457 0.878 - - - - - - 0.878 - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
51. acsl5 ENSDARG00000075931 880 0.876 0.876 - - - - - - - - acyl-CoA synthetase long chain family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-169]
52. si:ch211-242b18.1 ENSDARG00000054723 2929 0.873 - - - - - - 0.873 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
53. six2b ENSDARG00000054878 567 0.868 - - - - - - 0.868 - - SIX homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080723-23]
54. becn1 ENSDARG00000079128 581 0.866 - - - - - - - 0.866 - beclin 1, autophagy related [Source:ZFIN;Acc:ZDB-GENE-040426-1666]
55. si:dkeyp-104h9.5 ENSDARG00000073801 722 0.864 - - - - - - - 0.864 - si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
56. irx1b ENSDARG00000056594 2224 0.864 - - - - - 0.864 - - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
57. si:ch73-266f23.1 ENSDARG00000095135, ENSDARG00000105728 1338 0.862 - 0.862 - - - - - - - si:ch73-266f23.1 [Source:ZFIN;Acc:ZDB-GENE-110913-180]
58. scn4ba ENSDARG00000099031 1634 0.862 - - - - - 0.862 - - - sodium channel, voltage-gated, type IV, beta a [Source:ZFIN;Acc:ZDB-GENE-070615-18]
59. foxo3b ENSDARG00000042904 5046 0.862 - 0.862 - - - - - - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
60. prdx6 ENSDARG00000043511, ENSDARG00000116085 3456 0.86 - 0.860 - - - - - - - peroxiredoxin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1778]
61. EFCC1 ENSDARG00000077826 1359 0.858 - - - - - 0.858 - - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
62. waca ENSDARG00000012577 1794 0.857 - 0.857 - - - - - - - WW domain containing adaptor with coiled-coil a [Source:ZFIN;Acc:ZDB-GENE-030131-2624]
63. TNRC6C_2 TNRC6C_2 2444 0.857 - - - - - 0.857 - - -
64. itm2ca ENSDARG00000043448 1265 0.857 - - - - - 0.857 - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
65. hhip ENSDARG00000060397, ENSDARG00000111482, ENSDARG00000111668 3025 0.857 - - - - - - 0.857 - - hedgehog interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4827]
66. met ENSDARG00000070903 2088 0.857 0.857 - - - - - - - - MET proto-oncogene, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-041014-1]
67. LIMD1 LIMD1 1306 0.855 - - - - - - 0.855 - -
68. calm1a ENSDARG00000021811 4791 0.853 - - - - - 0.853 - - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
69. macf1 macf1 1862 0.852 - - - - - - 0.852 - -
70. usp40 ENSDARG00000071197 825 0.852 - 0.852 - - - - - - - ubiquitin specific peptidase 40 [Source:ZFIN;Acc:ZDB-GENE-060518-5]
71. BX296557.2 BX296557.2 1083 0.851 - - - - - - - 0.851 -
72. FRMD5_1 ENSDARG00000075942 883 0.851 - - - - - - 0.851 - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
73. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 0.85 - - - - - - 0.850 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
74. sall3a ENSDARG00000079613 257 0.849 - - - - - 0.849 - - - spalt-like transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-020228-4]
75. si:dkey-28b4.8 ENSDARG00000002840 1277 0.848 - - - - - 0.848 - - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
76. map7d2a ENSDARG00000068480 513 0.847 - - - - - 0.847 - - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
77. tppp3 ENSDARG00000030463 992 0.846 - - - - - - 0.846 - - tubulin polymerization-promoting protein family member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1909]
78. st14b ENSDARG00000044655 415 0.845 - - - - - - - 0.845 - suppression of tumorigenicity 14 (colon carcinoma) b [Source:ZFIN;Acc:ZDB-GENE-061103-613]
79. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 0.845 - - - - - - 0.845 - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
80. MYADML2 ENSDARG00000053953 810 0.844 - - - - - - 0.844 - - myeloid-associated differentiation marker-like 2 [Source:ZFIN;Acc:ZDB-GENE-120807-3]
81. acsf2 ENSDARG00000061201 4413 0.844 0.844 - - - - - - - - acyl-CoA synthetase family member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-7]
82. nckap5l ENSDARG00000079148 4227 0.843 - 0.843 - - - - - - - NCK-associated protein 5-like [Source:ZFIN;Acc:ZDB-GENE-090313-304]
83. rab11fip4a ENSDARG00000090170 839 0.843 - - - - - 0.843 - - - RAB11 family interacting protein 4 (class II) a [Source:ZFIN;Acc:ZDB-GENE-040718-266]
84. eif4e2rs1 ENSDARG00000015835 589 0.842 - 0.842 - - - - - - - eukaryotic translation initiation factor 4E family member 2 related sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1728]
85. srpx ENSDARG00000010318 946 0.842 - - - - - - 0.842 - - sushi-repeat containing protein X-linked [Source:ZFIN;Acc:ZDB-GENE-050327-43]
86. clstn1 ENSDARG00000031720 5286 0.842 - - - - - 0.842 - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
87. txnipb ENSDARG00000070000 2365 0.842 - - - - - - 0.842 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
88. tnnt2d ENSDARG00000002988 7590 0.841 - - - - - - 0.841 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
89. fam171a1 ENSDARG00000079788 1445 0.841 - 0.841 - - - - - - - family with sequence similarity 171, member A1 [Source:ZFIN;Acc:ZDB-GENE-061208-1]
90. CR548630.1 CR548630.1 3301 0.839 - - - - - 0.839 - - -
91. sox9a ENSDARG00000003293 812 0.839 - - - - - - 0.839 - - SRY (sex determining region Y)-box 9a [Source:ZFIN;Acc:ZDB-GENE-001103-1]
92. nova2 ENSDARG00000017673 7685 0.835 - - - - - 0.835 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
93. lrrc1 ENSDARG00000102684 1054 0.834 - - - - - - - 0.834 - leucine rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-1]
94. inppl1a ENSDARG00000104222 6256 0.834 0.834 - - - - - - - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
95. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 0.833 - - - - - 0.833 - - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
96. zgc:195001 ENSDARG00000070484 3281 0.833 - - - - - - 0.833 - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
97. kras ENSDARG00000010844 2885 0.832 - 0.832 - - - - - - - v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040808-67]
98. UTS2R 109 0.832 - - - - - - 0.832 - - urotensin 2 receptor
99. crip2 ENSDARG00000070670 4844 0.831 - - - - - - 0.831 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
100. clstn3 ENSDARG00000073883 590 0.83 - - - - - 0.830 - - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]

There are 1427 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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