Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atad2b

Gene Name Gene ID Reads Annotation
atad2b ENSDARG00000060537 3050 ATPase family, AAA domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110411-210]










Genes with expression patterns similar to atad2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atad2b ENSDARG00000060537 3050 8 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 ATPase family, AAA domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110411-210]
2. TAF15 ENSDARG00000070019 5102 3.068 - 0.764 - - - 0.780 0.772 - 0.752 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
3. kpnb1 ENSDARG00000104889 9282 3.065 0.734 - 0.736 - - - - 0.852 0.743 karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
4. tnrc6b ENSDARG00000074161 4597 2.254 - - - 0.794 - - 0.709 - 0.751 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
5. TNRC6A ENSDARG00000079688 14433 2.253 - - 0.730 - - 0.737 0.786 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
6. tmpob ENSDARG00000022978 8121 2.22 - - - 0.746 - - - 0.765 0.709 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
7. polr2a ENSDARG00000099966 5706 2.183 - - 0.707 - - - 0.708 - 0.768 polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
8. hnrpl 6412 2.175 - - - - - 0.725 0.725 - 0.725 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
9. whsc1l1 8544 2.154 - - - - - 0.708 0.718 - 0.728 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
10. cbx3a ENSDARG00000003860 4922 2.143 - 0.739 - 0.700 - - - - 0.704 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
11. ptgesl ENSDARG00000068415, ENSDARG00000110236 1718 1.635 - 0.783 - - - - - 0.852 - prostaglandin E synthase 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-1063]
12. snrpc ENSDARG00000009871 9567 1.614 - - - - - - 0.863 - 0.751 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
13. insm1b ENSDARG00000053301 2032 1.597 - - - - - - - 0.810 0.787 insulinoma-associated 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2602]
14. rbmx ENSDARG00000014244 3445 1.591 - 0.825 - - - - - - 0.766 RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
15. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.585 - - - - - 0.763 - - 0.822 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
16. zgc:77262 ENSDARG00000044545 5563 1.578 - 0.711 - - - - - 0.867 - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
17. mbd3a ENSDARG00000061774 4047 1.575 - 0.871 - - - 0.704 - - - methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
18. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 26947 1.57 - - - - - - 0.780 0.790 - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
19. ssbp4 ENSDARG00000056483 10196 1.57 - - - - - 0.773 0.797 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
20. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 1.565 - 0.795 - - - - 0.770 - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
21. gpm6bb ENSDARG00000001676 2005 1.562 - - - - - - - 0.803 0.759 glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
22. inab ENSDARG00000053248 3239 1.561 - - - - - - - 0.791 0.770 internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
23. acvr1b acvr1b 2963 1.559 - - - - - - 0.796 - 0.763
24. CYTH2 ENSDARG00000028800 2349 1.554 - - - - - - - 0.825 0.729 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
25. si:ch211-196l7.4 ENSDARG00000095451 3766 1.548 - 0.776 - - - - - 0.772 - si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
26. tet3 ENSDARG00000062646 6672 1.548 - - - - - - 0.816 0.732 - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
27. rtca ENSDARG00000002215 3558 1.544 - - - - - - 0.725 - 0.819 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
28. ACVR1B ACVR1B 4824 1.543 - - - - - - 0.709 0.834 -
29. sf1 ENSDARG00000008188 5142 1.534 - - - - - - 0.769 - 0.765 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
30. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.534 - - - - - - 0.776 - 0.758 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
31. kif11 ENSDARG00000010948 4973 1.534 - 0.781 - - - - - - 0.753 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
32. ap2b1 ENSDARG00000035152 2912 1.534 - - - - - - 0.702 0.832 - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
33. usp7 ENSDARG00000073710 7017 1.532 - - - - - - 0.787 - 0.745 ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
34. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.529 - 0.789 - - - - 0.740 - - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
35. eif4h ENSDARG00000042252 6742 1.522 - - - - - - - 0.752 0.770 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
36. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 1.52 - - - - - - - 0.736 0.784 immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
37. WAPAL WAPAL 1888 1.52 - - - - - 0.736 - - 0.784
38. xpo1a ENSDARG00000078041 3544 1.52 - - - - - 0.780 0.740 - - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
39. rbm14a ENSDARG00000012723, ENSDARG00000114603 3802 1.519 - - - - - - 0.715 - 0.804 RNA binding motif protein 14a [Source:ZFIN;Acc:ZDB-GENE-050522-496]
40. usp10 ENSDARG00000103422 4247 1.516 - - 0.785 - - - 0.731 - - ubiquitin specific peptidase 10 [Source:ZFIN;Acc:ZDB-GENE-030219-132]
41. SCML2 ENSDARG00000012949 1310 1.514 - - - - - - - 0.764 0.750 Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
42. prpf40a ENSDARG00000058467 6565 1.513 - - - - - 0.719 - - 0.794 PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
43. HIPK1_1 HIPK1_1 8096 1.507 - - - - - - 0.788 - 0.719
44. gna11b ENSDARG00000053326 5118 1.506 - - - - - 0.719 0.787 - - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
45. kif22 ENSDARG00000102624 3694 1.504 - - - - - 0.721 - - 0.783 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
46. arhgap1 ENSDARG00000024324 6904 1.503 - - - - - - - 0.716 0.787 Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
47. lbr ENSDARG00000014013 4835 1.501 - - - - - - 0.721 - 0.780 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
48. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.501 - - 0.724 - - - 0.777 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
49. smarca5 ENSDARG00000052348 15433 1.5 - - - - - - 0.713 - 0.787 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
50. zgc:55764 zgc:55764 645 1.495 - 0.780 - - - - - 0.715 -
51. gnmt ENSDARG00000006840 2422 1.494 0.711 0.783 - - - - - - - glycine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040227-1]
52. marcksa ENSDARG00000004049 2518 1.492 - - - - - 0.706 - - 0.786 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
53. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.489 - - - - - - 0.782 0.707 - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
54. tsc22d1 ENSDARG00000038306 2413 1.488 - - - - - 0.720 0.768 - - TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
55. sumo3a ENSDARG00000028119 13447 1.487 - - - - - - 0.759 - 0.728 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
56. ash1l ENSDARG00000070981 2520 1.486 - 0.702 - - - - 0.784 - - ash1 (absent, small, or homeotic)-like (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6101]
57. Sep-06 Sep-06 5465 1.484 - 0.719 - - - - - - 0.765
58. HNRNPAB HNRNPAB 22267 1.482 - - - - - - 0.719 - 0.763
59. vrk1 ENSDARG00000018006 1759 1.479 - 0.741 - - - - - 0.738 - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
60. papola ENSDARG00000009585 9567 1.476 - - 0.729 - - - 0.747 - - poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]
61. ncapd2 ENSDARG00000005058 2819 1.473 - - - - - 0.733 - - 0.740 non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
62. puf60a ENSDARG00000032175 5618 1.47 - - - - - - 0.724 - 0.746 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
63. kdm1a ENSDARG00000060679 6152 1.468 - - 0.741 - - - 0.727 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
64. ogt.2 1166 1.468 - 0.733 - - - - - - 0.735 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 2, transcript variant X3
65. rbm4.1 ENSDARG00000036386 625 1.465 - - - - - - - 0.719 0.746 RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
66. smc1al ENSDARG00000058203 8838 1.463 - - 0.706 - - - - - 0.757 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
67. lypla2 ENSDARG00000053656 8971 1.455 - - - - - - 0.707 - 0.748 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
68. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.453 - - - 0.729 - - - - 0.724 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
69. luc7l3 ENSDARG00000014366 4416 1.45 - - 0.702 - - - 0.748 - - LUC7-like 3 pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-060616-375]
70. si:dkeyp-113d7.10 ENSDARG00000092359 1585 1.444 - - - - - 0.741 - - 0.703 si:dkeyp-113d7.10 [Source:ZFIN;Acc:ZDB-GENE-061207-80]
71. rngtt ENSDARG00000032261 833 1.442 - - - - - - 0.738 - 0.704 RNA guanylyltransferase and 5'-phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-2087]
72. vezf1b ENSDARG00000061030 1410 1.434 - - - 0.719 - - - - 0.715 vascular endothelial zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-060825-121]
73. cand1 ENSDARG00000017841 8164 1.433 - 0.722 - 0.711 - - - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
74. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.43 - - - - - - 0.714 - 0.716 high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
75. srsf9 ENSDARG00000008097 2405 1.428 - - - - - - 0.704 0.724 - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
76. TMEM150A TMEM150A 975 1.428 - - - - - 0.727 - - 0.701
77. phc1 ENSDARG00000002971 924 1.428 - - - - - - 0.723 0.705 - polyhomeotic homolog 1 [Source:ZFIN;Acc:ZDB-GENE-081022-39]
78. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.427 - - - - - - 0.701 0.726 - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
79. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.422 - 0.703 - - - - 0.719 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
80. mcm2 ENSDARG00000102798 8148 1.421 - - - - - - 0.702 - 0.719 minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
81. fzd7a ENSDARG00000060004, ENSDARG00000115544 4171 1.418 - - - - - - 0.718 0.700 - frizzled class receptor 7a [Source:ZFIN;Acc:ZDB-GENE-990415-223]
82. phactr4b ENSDARG00000032221 1389 0.892 - - - - - - 0.892 - - phosphatase and actin regulator 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1131]
83. pqlc3 ENSDARG00000054251 1039 0.883 - 0.883 - - - - - - - PQ loop repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-040912-40]
84. snrpe ENSDARG00000033175 7462 0.88 - - - - - - 0.880 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
85. slc38a5b ENSDARG00000014587 8461 0.879 - 0.879 - - - - - - - solute carrier family 38, member 5b [Source:ZFIN;Acc:ZDB-GENE-040718-395]
86. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 0.87 - 0.870 - - - - - - - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
87. srebf1 ENSDARG00000067607 1537 0.87 - 0.870 - - - - - - - sterol regulatory element binding transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-090812-3]
88. khsrp ENSDARG00000026489 15738 0.861 - - - - - - 0.861 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
89. lrig1 ENSDARG00000075625 2027 0.855 - - - - - - - 0.855 - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
90. uba1 ENSDARG00000037559 11579 0.854 - - - - - - 0.854 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
91. h2afy2_1 ENSDARG00000087897 9887 0.853 - - - - - - 0.853 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
92. srsf6b ENSDARG00000016783 9926 0.853 - - - - - - 0.853 - - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
93. cisd2 ENSDARG00000052703 2841 0.844 - 0.844 - - - - - - - CDGSH iron sulfur domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1381]
94. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 0.843 - - - - - - 0.843 - - SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
95. zgc:174906 ENSDARG00000075314 2187 0.842 - - - - - - - 0.842 - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
96. cica ENSDARG00000071150 633 0.84 - 0.840 - - - - - - - capicua transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-060503-700]
97. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 0.838 - - - - - - 0.838 - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
98. hgs ENSDARG00000020960 3574 0.838 - 0.838 - - - - - - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
99. tmed7 ENSDARG00000046022 2435 0.838 - - - - - - 0.838 - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
100. rca2.1 ENSDARG00000056075 3410 0.836 - 0.836 - - - - - - - regulator of complement activation group 2 gene 1 [Source:ZFIN;Acc:ZDB-GENE-050320-60]

There are 794 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA