Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for atad1b

Gene Name Gene ID Reads Annotation
atad1b ENSDARG00000056609 40 ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]










Genes with expression patterns similar to atad1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. atad1b ENSDARG00000056609 40 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
2. TRMT12 ENSDARG00000060338 58 2.854 1.000 1.000 0.854 - - - - - - tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182]
3. si:ch211-73m21.1 ENSDARG00000096491 10 2 - 1.000 - - - 1.000 - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
4. ccdc33 ENSDARG00000051858 11 2 1.000 1.000 - - - - - - - coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1]
5. CABZ01054405.2 CABZ01054405.2 46 2 1.000 1.000 - - - - - - -
6. si:dkey-53f14.2 si:dkey-53f14.2 4 2 1.000 1.000 - - - - - - -
7. MCOLN2 ENSDARG00000098918 12 2 - 1.000 - - - 1.000 - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
8. si:ch211-102g22.3 si:ch211-102g22.3 2 2 - 1.000 - - - 1.000 - - -
9. AKNA_1 AKNA_1 2 2 - 1.000 - - - 1.000 - - -
10. CU457778.1 ENSDARG00000098976 38 1.938 0.938 - - - - 1.000 - - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
11. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1.91 0.910 1.000 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
12. SLX1A SLX1A 15 1.903 - 1.000 - - - - 0.903 - -
13. radil ENSDARG00000079779 14 1.884 1.000 - 0.884 - - - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
14. ENSDARG00000089996 ENSDARG00000089996 17 1.88 1.000 - 0.880 - - - - - -
15. AL935174.1 ENSDARG00000109674 18 1.856 - 1.000 - - - 0.856 - - -
16. map3k4 ENSDARG00000104835 34 1.838 1.000 - - - - - 0.838 - - mitogen-activated protein kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-990603-4]
17. ARHGEF40 ENSDARG00000078979 25 1.798 - 0.798 - - - 1.000 - - - Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
18. APOLD1 APOLD1 56 1.779 - 0.876 - - - - 0.903 - -
19. si:dkey-189h5.6 ENSDARG00000095188 50 1.754 - 1.000 - - - 0.754 - - - si:dkey-189h5.6 [Source:ZFIN;Acc:ZDB-GENE-060526-230]
20. CST7 CST7 22 1.75 - 1.000 - - - - 0.750 - -
21. crfb4 ENSDARG00000068711 51 1.734 - - 0.734 - - 1.000 - - - cytokine receptor family member b4 [Source:ZFIN;Acc:ZDB-GENE-070905-3]
22. stag1a ENSDARG00000061205 13 1.733 - 1.000 - 0.733 - - - - - stromal antigen 1a [Source:ZFIN;Acc:ZDB-GENE-070912-448]
23. PUSL1 ENSDARG00000074565 54 1.717 - 1.000 - 0.717 - - - - - pseudouridylate synthase like 1 [Source:ZFIN;Acc:ZDB-GENE-101110-1]
24. si:ch211-66k16.28 ENSDARG00000088423 80 1.715 - - 0.715 - - 1.000 - - - si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]
25. znf804b ENSDARG00000103396 11 1.7 - 1.000 - 0.700 - - - - - zinc finger protein 804B [Source:ZFIN;Acc:ZDB-GENE-100922-265]
26. NBL1 428 1.68 0.819 - 0.861 - - - - - - neuroblastoma 1, DAN family BMP antagonist
27. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1.647 - 0.798 0.849 - - - - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
28. si:dkey-111e8.5 ENSDARG00000093960 28 1.63 - 0.746 - - - 0.884 - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
29. hic1 ENSDARG00000055493 219 1.611 - - - - - 0.708 0.903 - - hypermethylated in cancer 1 [Source:ZFIN;Acc:ZDB-GENE-040713-2]
30. si:dkey-211a8.1 si:dkey-211a8.1 28 1.605 0.749 - - - - 0.856 - - -
31. cyp2p7 ENSDARG00000042980 29 1.597 - 0.738 - - - 0.859 - - - cytochrome P450, family 2, subfamily P, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-041001-155]
32. spdya ENSDARG00000059131 33 1.594 0.830 - - - - - 0.764 - - speedy/RINGO cell cycle regulator family member A [Source:ZFIN;Acc:ZDB-GENE-041010-194]
33. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 1.579 - - 0.766 - - - 0.813 - - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
34. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 1.569 0.861 - - - - 0.708 - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
35. si:ch73-60p2.1 si:ch73-60p2.1 21 1.518 0.793 0.725 - - - - - - -
36. si:ch211-114l13.10 25 1.512 0.735 0.777 - - - - - - - si:ch211-114l13.10
37. fybb ENSDARG00000044694 136 1.442 - - 0.733 - - - 0.709 - - FYN binding protein b [Source:ZFIN;Acc:ZDB-GENE-091204-85]
38. cacna1bb ENSDARG00000079295, ENSDARG00000116562 1 1 - - - - - 1.000 - - - calcium channel, voltage-dependent, N type, alpha 1B subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-4]
39. si:ch211-239j9.1 ENSDARG00000096319 27 1 - - - - - 1.000 - - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
40. AL929220.1 ENSDARG00000103323 14 1 - 1.000 - - - - - - -
41. slc7a10a ENSDARG00000008100 178 1 - 1.000 - - - - - - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
42. fshb ENSDARG00000010841 0 1 - 1.000 - - - - - - - follicle stimulating hormone subunit beta [Source:ZFIN;Acc:ZDB-GENE-040806-1]
43. IL17RA_1 IL17RA_1 39 1 - 1.000 - - - - - - -
44. LRRC30 LRRC30 83 1 - - - - - 1.000 - - -
45. ccrl1b ccrl1b 154 1 1.000 - - - - - - - -
46. ENDOD1_6 ENDOD1_6 2 1 - - - - - 1.000 - - -
47. AL954173.3 AL954173.3 1 1 - - - - - 1.000 - - -
48. si:dkey-20j3.4 si:dkey-20j3.4 4 1 - - - - - 1.000 - - -
49. foxg1b ENSDARG00000032705 354 1 - 1.000 - - - - - - - forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
50. si:ch211-204a13.1 si:ch211-204a13.1 6 1 - 1.000 - - - - - - -
51. si:ch211-42d10.5 si:ch211-42d10.5 17 1 - 1.000 - - - - - - -
52. si:dkey-9i23.8 ENSDARG00000095407 1 1 - - - - - 1.000 - - - si:dkey-9i23.8 [Source:ZFIN;Acc:ZDB-GENE-090313-367]
53. si:dkey-163m14.10 si:dkey-163m14.10 33 1 - 1.000 - - - - - - -
54. NETO2 121 1 - 1.000 - - - - - - - neuropilin and tolloid like 2, transcript variant X2
55. VDAC3 ENSDARG00000003695 34 1 - 1.000 - - - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
56. ZNF512B ENSDARG00000071055 7 1 - - - - - 1.000 - - - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
57. svopa ENSDARG00000056833 14 1 - 1.000 - - - - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
58. si:dkey-14d8.2 38 1 - 1.000 - - - - - - - si:dkey-14d8.2
59. hs6st3b ENSDARG00000069500 5 1 - 1.000 - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
60. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - - - 1.000 - - -
61. BX005472.1 BX005472.1 2 1 - - - - - 1.000 - - -
62. btr20 ENSDARG00000102992 4 1 - - - - - 1.000 - - - bloodthirsty-related gene family, member 20 [Source:ZFIN;Acc:ZDB-GENE-060421-3419]
63. si:ch1073-416j23.1 ENSDARG00000055934 4 1 1.000 - - - - - - - - si:ch1073-416j23.1 [Source:ZFIN;Acc:ZDB-GENE-100922-35]
64. FP016207.1 FP016207.1 3 1 - 1.000 - - - - - - -
65. si:dkey-256i11.4 si:dkey-256i11.4 3 1 - 1.000 - - - - - - -
66. si:ch211-221e5.1 si:ch211-221e5.1 2 1 - 1.000 - - - - - - -
67. cyth4b ENSDARG00000103984 27 1 - 1.000 - - - - - - - cytohesin 4b [Source:ZFIN;Acc:ZDB-GENE-080219-45]
68. irx4b ENSDARG00000036051 54 1 - 1.000 - - - - - - - iroquois homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-040712-4]
69. TTC34 ENSDARG00000091221 3 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 34 [Source:ZFIN;Acc:ZDB-GENE-140106-266]
70. CABZ01078314.1 CABZ01078314.1 44 1 - - - - - 1.000 - - -
71. gramd4 gramd4 4 1 - 1.000 - - - - - - -
72. si:ch211-10h8.1 si:ch211-10h8.1 10 1 - 1.000 - - - - - - -
73. MPP3 MPP3 13 1 - - - - - 1.000 - - -
74. CABZ01102230.1 CABZ01102230.1 1 1 - - - - - 1.000 - - -
75. CABZ01073380.1 CABZ01073380.1 5 1 - 1.000 - - - - - - -
76. ZBED1_3 ZBED1_3 7 1 1.000 - - - - - - - -
77. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 - 1.000 - - - - - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
78. si:busm1-71b9.3 11 1 - 1.000 - - - - - - - si:busm1-71b9.3, transcript variant X4
79. CT573248.1 ENSDARG00000074029 10 1 - 1.000 - - - - - - -
80. nsdhl ENSDARG00000099315 63 1 - 1.000 - - - - - - - NAD(P) dependent steroid dehydrogenase-like [Source:ZFIN;Acc:ZDB-GENE-050417-163]
81. OTOL1 OTOL1 19 1 - 1.000 - - - - - - -
82. C2H10orf67 C2H10orf67 3 1 - 1.000 - - - - - - -
83. zgc:110782 ENSDARG00000044544 48 1 - - - - - 1.000 - - - zgc:110782 [Source:ZFIN;Acc:ZDB-GENE-050320-51]
84. clrn1 ENSDARG00000102890 5 1 - - - - - 1.000 - - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
85. si:ch211-121a2.4 ENSDARG00000028541 40 1 - 1.000 - - - - - - - si:ch211-121a2.4 [Source:ZFIN;Acc:ZDB-GENE-070705-23]
86. abcc9 ENSDARG00000015985 20 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
87. osbpl6 ENSDARG00000063730 2 1 - 1.000 - - - - - - - oxysterol binding protein-like 6 [Source:ZFIN;Acc:ZDB-GENE-070912-206]
88. CR847844.5 CR847844.5 5 1 - 1.000 - - - - - - -
89. BX465848.2 ENSDARG00000116920 6 1 - 1.000 - - - - - - -
90. chpfb ENSDARG00000078037 30 1 - - - - - 1.000 - - - chondroitin polymerizing factor b [Source:ZFIN;Acc:ZDB-GENE-100504-1]
91. nitr7b_1 ENSDARG00000067977 1 1 - - - - - 1.000 - - - novel immune-type receptor 7b [Source:ZFIN;Acc:ZDB-GENE-041001-8]
92. irf4a ENSDARG00000006560 4 1 - 1.000 - - - - - - - interferon regulatory factor 4a [Source:ZFIN;Acc:ZDB-GENE-070912-330]
93. CABZ01112732.1 ENSDARG00000068453 4 1 1.000 - - - - - - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
94. KCNAB3 KCNAB3 134 1 - 1.000 - - - - - - -
95. INPP5A 1 1 - 1.000 - - - - - - - inositol polyphosphate-5-phosphatase A
96. ATP6AP1L ATP6AP1L 164 1 - 1.000 - - - - - - -
97. vwf ENSDARG00000077231 5 1 - 1.000 - - - - - - - von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1]
98. arhgef19 ENSDARG00000078853 17 1 - 1.000 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 19 [Source:ZFIN;Acc:ZDB-GENE-090313-243]
99. pdcl ENSDARG00000009480 12 1 - - - - - 1.000 - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
100. ucn3l ENSDARG00000087241 29 1 - - - - - 1.000 - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]

There are 911 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA