Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for asic1b

Gene Name Gene ID Reads Annotation
asic1b ENSDARG00000101866 61 acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]










Genes with expression patterns similar to asic1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. asic1b ENSDARG00000101866 61 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
2. her8a ENSDARG00000016363 996 2.361 0.840 - 0.774 0.747 - - - - - hairy-related 8a [Source:ZFIN;Acc:ZDB-GENE-030131-2376]
3. iqsec3b ENSDARG00000093091 10 2 1.000 1.000 - - - - - - - IQ motif and Sec7 domain 3b [Source:ZFIN;Acc:ZDB-GENE-050420-210]
4. si:dkey-24i24.3 ENSDARG00000088452 27 1.987 - 1.000 0.987 - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
5. CABZ01021433.1 ENSDARG00000105696 74 1.955 1.000 0.955 - - - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
6. LRRC2 LRRC2 23 1.928 - 1.000 - - 0.928 - - - -
7. gng13b ENSDARG00000037921 215 1.912 - 0.935 - 0.977 - - - - - guanine nucleotide binding protein (G protein), gamma 13b [Source:ZFIN;Acc:ZDB-GENE-040718-97]
8. ADAP2 ENSDARG00000070565 29 1.858 1.000 - - - - 0.858 - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
9. CU929356.4 CU929356.4 86 1.831 - 1.000 - - - 0.831 - - -
10. ENSDARG00000096199 ENSDARG00000096199 15 1.831 1.000 - - - - 0.831 - - -
11. scn4ba ENSDARG00000099031 1634 1.812 0.836 0.976 - - - - - - - sodium channel, voltage-gated, type IV, beta a [Source:ZFIN;Acc:ZDB-GENE-070615-18]
12. nr1d4b ENSDARG00000059370 243 1.805 0.848 0.957 - - - - - - - nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
13. C2CD3 ENSDARG00000074137 51 1.802 0.802 1.000 - - - - - - - C2 calcium-dependent domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-104]
14. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 1.798 - - 0.967 - - 0.831 - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
15. si:dkey-66n24.2 si:dkey-66n24.2 69 1.783 1.000 0.783 - - - - - - -
16. CAMKK2 CAMKK2 184 1.777 - 0.855 - 0.922 - - - - -
17. arvcfa ENSDARG00000074329 53 1.769 - 1.000 - - 0.769 - - - - ARVCF, delta catenin family member a [Source:ZFIN;Acc:ZDB-GENE-091113-43]
18. map3k7cl ENSDARG00000069143 130 1.759 - 0.865 - 0.894 - - - - - map3k7 C-terminal like [Source:ZFIN;Acc:ZDB-GENE-091204-239]
19. nadl1.2 695 1.754 0.760 0.994 - - - - - - - neural adhesion molecule L1.2, transcript variant X1
20. ptprc ENSDARG00000071437 104 1.749 1.000 - - - - 0.749 - - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
21. bmf2 ENSDARG00000041414, ENSDARG00000116024 18 1.748 - 0.917 - - - 0.831 - - - BCL2 modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-319]
22. tubgcp4 ENSDARG00000005374 208 1.739 - 0.877 - 0.862 - - - - - tubulin, gamma complex associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-081022-124]
23. si:dkey-49n23.3 ENSDARG00000095325 4 1.731 1.000 - - - 0.731 - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
24. PEG3_12 PEG3_12 128 1.728 - - 0.923 - - 0.805 - - -
25. wnt8b ENSDARG00000006911 98 1.716 - - 0.882 - - 0.834 - - - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
26. npnt ENSDARG00000018721 19 1.708 - 0.977 - - 0.731 - - - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
27. aldh2.2 ENSDARG00000028087 303 1.704 - - 0.812 0.892 - - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
28. SHARPIN ENSDARG00000076995 235 1.701 - 0.811 - 0.890 - - - - - SHANK-associated RH domain interacting protein [Source:ZFIN;Acc:ZDB-GENE-101223-1]
29. dnm1b ENSDARG00000009281 219 1.68 0.780 - - 0.900 - - - - - dynamin 1b [Source:ZFIN;Acc:ZDB-GENE-100920-3]
30. si:ch73-22o12.1 ENSDARG00000062831 251 1.675 - 0.933 0.742 - - - - - - si:ch73-22o12.1 [Source:ZFIN;Acc:ZDB-GENE-110411-27]
31. PPP1R35 ENSDARG00000068916 94 1.672 0.818 - 0.854 - - - - - - protein phosphatase 1, regulatory subunit 35 [Source:ZFIN;Acc:ZDB-GENE-060825-232]
32. fam151b ENSDARG00000020024 255 1.663 - 0.863 - - - 0.800 - - - family with sequence similarity 151, member B [Source:ZFIN;Acc:ZDB-GENE-040801-38]
33. crybb3 ENSDARG00000041301 48 1.655 - 0.712 - - 0.943 - - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
34. arhgap27 ENSDARG00000104255 439 1.654 - 0.881 - 0.773 - - - - - Rho GTPase activating protein 27 [Source:ZFIN;Acc:ZDB-GENE-030131-3922]
35. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 1.649 0.872 - - 0.777 - - - - - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
36. ankrd22 ENSDARG00000002298 261 1.648 - - 0.911 - - 0.737 - - - ankyrin repeat domain 22 [Source:ZFIN;Acc:ZDB-GENE-040426-1120]
37. arl4ab ENSDARG00000033182, ENSDARG00000110649 181 1.636 - - 0.875 - - 0.761 - - - ADP-ribosylation factor-like 4ab [Source:ZFIN;Acc:ZDB-GENE-030219-167]
38. ptk2ba ENSDARG00000022841 19 1.632 - 0.803 - - - 0.829 - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
39. map2k4a ENSDARG00000063583 38 1.627 - 0.798 - - - 0.829 - - - mitogen-activated protein kinase kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060512-98]
40. hivep3a ENSDARG00000075928 17 1.618 0.818 0.800 - - - - - - - human immunodeficiency virus type I enhancer binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-081029-2]
41. alkbh6 ENSDARG00000077253 117 1.603 0.786 0.817 - - - - - - - alkB homolog 6 [Source:ZFIN;Acc:ZDB-GENE-060407-1]
42. SV2A ENSDARG00000059945 1278 1.603 0.838 0.765 - - - - - - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
43. zrsr2 ENSDARG00000058448 335 1.591 - - - 0.839 - 0.752 - - - zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1495]
44. gdap2 ENSDARG00000021569 1013 1.589 - 0.716 - 0.873 - - - - - ganglioside induced differentiation associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-31]
45. CT990561.1 ENSDARG00000058284 566 1.587 - 0.842 - - - - - - 0.745 EPH receptor A5 [Source:NCBI gene;Acc:797595]
46. rhbdl2 ENSDARG00000069833, ENSDARG00000109477 891 1.579 - 0.849 0.730 - - - - - - rhomboid, veinlet-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-732]
47. nrxn2b ENSDARG00000063150 343 1.57 0.740 - - 0.830 - - - - - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
48. jak3 ENSDARG00000010252 11 1.562 - - - - 0.731 0.831 - - - Janus kinase 3 (a protein tyrosine kinase, leukocyte) [Source:ZFIN;Acc:ZDB-GENE-070725-4]
49. cdk5r1b ENSDARG00000045087 2075 1.558 0.791 0.767 - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
50. fabp7b ENSDARG00000034650 397 1.538 - 0.814 0.724 - - - - - - fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
51. adcyap1b ENSDARG00000027740 1539 1.528 0.707 0.821 - - - - - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
52. rhbdd2 ENSDARG00000092463 937 1.522 0.752 0.770 - - - - - - - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
53. CR478286.1_1 CR478286.1_1 306 1.513 0.765 - 0.748 - - - - - -
54. asap2a ENSDARG00000010181 384 1.511 - 0.780 0.731 - - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2a [Source:ZFIN;Acc:ZDB-GENE-041210-256]
55. si:ch211-196n4.5 si:ch211-196n4.5 63 1.503 - - 0.784 - - - - 0.719 -
56. tefb ENSDARG00000098103 370 1.496 - 0.754 0.742 - - - - - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
57. cry4 ENSDARG00000011890 980 1.483 - - 0.706 0.777 - - - - - cryptochrome circadian clock 4 [Source:ZFIN;Acc:ZDB-GENE-010426-7]
58. cyp26c1 ENSDARG00000056029 1426 1.472 - 0.744 0.728 - - - - - - cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
59. si:ch73-343l4.2 ENSDARG00000079903 10 1.431 - - - - 0.725 0.706 - - - si:ch73-343l4.2 [Source:ZFIN;Acc:ZDB-GENE-090313-154]
60. si:dkey-150k17.3 33 1 1.000 - - - - - - - - si:dkey-150k17.3
61. BX470131.1 BX470131.1 86 1 1.000 - - - - - - - -
62. zgc:113210 ENSDARG00000002872 99 1 1.000 - - - - - - - - zgc:113210 [Source:ZFIN;Acc:ZDB-GENE-050320-83]
63. zgc:153039 ENSDARG00000102724 4 1 1.000 - - - - - - - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
64. si:dkey-228i19.32 si:dkey-228i19.32 9 1 1.000 - - - - - - - -
65. ZNF337_11 ZNF337_11 11 1 1.000 - - - - - - - -
66. CABZ01053592.1 ENSDARG00000117388 6 1 1.000 - - - - - - - -
67. prkchb ENSDARG00000043243 126 1 - 1.000 - - - - - - - protein kinase C, eta, b [Source:ZFIN;Acc:ZDB-GENE-041001-104]
68. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 1.000 - - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
69. VASH1 ENSDARG00000092716 33 1 1.000 - - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
70. grik5 ENSDARG00000101449, ENSDARG00000111384 75 1 1.000 - - - - - - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
71. cyp3a65 ENSDARG00000103295 7 1 - 1.000 - - - - - - - cytochrome P450, family 3, subfamily A, polypeptide 65 [Source:ZFIN;Acc:ZDB-GENE-050604-1]
72. TSPAN17 ENSDARG00000114067 3 1 - 1.000 - - - - - - - tetraspanin 17 [Source:ZFIN;Acc:ZDB-GENE-030131-3673]
73. BEGAIN BEGAIN 39 1 1.000 - - - - - - - -
74. TRIM14_4 TRIM14_4 2 1 1.000 - - - - - - - -
75. C13H10orf53 C13H10orf53 3 1 1.000 - - - - - - - -
76. si:dkey-17e6.2 si:dkey-17e6.2 72 1 1.000 - - - - - - - -
77. CLDN20 26 1 1.000 - - - - - - - - claudin 20, transcript variant X2
78. KHNYN ENSDARG00000092488 10 1 - 1.000 - - - - - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
79. LRRC4C ENSDARG00000113411 36 1 1.000 - - - - - - - - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
80. CABZ01112215.2 CABZ01112215.2 11 1 - 1.000 - - - - - - -
81. rbm10 ENSDARG00000077400 1 1 1.000 - - - - - - - - RNA binding motif protein 10 [Source:ZFIN;Acc:ZDB-GENE-100922-245]
82. ZNF337_9 ZNF337_9 18 1 1.000 - - - - - - - -
83. dync1i2b ENSDARG00000103195 46 1 1.000 - - - - - - - - dynein, cytoplasmic 1, intermediate chain 2b [Source:ZFIN;Acc:ZDB-GENE-090121-1]
84. CU570691.1 ENSDARG00000088908 5 1 1.000 - - - - - - - -
85. si:dkey-65b12.12 ENSDARG00000094458 26 1 1.000 - - - - - - - - si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
86. NPBWR2 NPBWR2 132 1 1.000 - - - - - - - -
87. AL929291.1 AL929291.1 16 1 1.000 - - - - - - - -
88. SNORD18_1 SNORD18_1 5 1 - 1.000 - - - - - - -
89. trpc1 ENSDARG00000061203 62 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
90. zgc:77118 ENSDARG00000014208, ENSDARG00000093176 63 1 1.000 - - - - - - - - zgc:77118 [Source:ZFIN;Acc:ZDB-GENE-040426-2211]
91. cd74b ENSDARG00000036628 8 1 - 1.000 - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
92. CABZ01078944.1 CABZ01078944.1 9 1 1.000 - - - - - - - -
93. SNORA19 SNORA19 24 1 1.000 - - - - - - - -
94. s100t ENSDARG00000055589 453 1 1.000 - - - - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
95. CABZ01021426.1 CABZ01021426.1 25 1 - 1.000 - - - - - - -
96. shank2 ENSDARG00000062325 66 1 1.000 - - - - - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
97. si:ch211-216b21.2 ENSDARG00000060253 54 1 1.000 - - - - - - - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
98. helt ENSDARG00000056400 482 1 1.000 - - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
99. COX5B ENSDARG00000015978 70 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
100. CABZ01041804.1 CABZ01041804.1 312 1 1.000 - - - - - - - -

There are 1619 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA