Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for asic1a

Gene Name Gene ID Reads Annotation
asic1a ENSDARG00000008329 347 acid-sensing (proton-gated) ion channel 1a [Source:ZFIN;Acc:ZDB-GENE-040513-2]










Genes with expression patterns similar to asic1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. asic1a ENSDARG00000008329 347 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 acid-sensing (proton-gated) ion channel 1a [Source:ZFIN;Acc:ZDB-GENE-040513-2]
2. fbxo11a ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 1129 1.766 0.839 - - - - - - 0.927 - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
3. wu:fj13e08 1223 1.736 - - 0.811 - - - - 0.925 - wu:fj13e08
4. ZBTB39 ENSDARG00000019265 687 1.704 - - - - - - 0.730 0.974 - zinc finger and BTB domain containing 39 [Source:ZFIN;Acc:ZDB-GENE-130822-1]
5. tmem88b ENSDARG00000069388 501 1.698 - 0.767 - - - - - 0.931 - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
6. cbll1 ENSDARG00000015222 995 1.661 - - 0.729 - - - - 0.932 - Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-691]
7. CDC42SE2 ENSDARG00000094577, ENSDARG00000113403 606 1.639 - - 0.717 - - - - 0.922 - CDC42 small effector 2 [Source:ZFIN;Acc:ZDB-GENE-080204-45]
8. atcaya ENSDARG00000071678 344 1.634 - - - - 0.708 - - 0.926 - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
9. RSF1_2 RSF1_2 1343 1.609 - - - - - 0.748 - 0.861 -
10. anapc15 ENSDARG00000101285 391 1.597 0.800 - - - - - 0.797 - - anaphase promoting complex subunit 15 [Source:ZFIN;Acc:ZDB-GENE-060825-43]
11. PKN1 PKN1 42 1.505 0.772 - - - - - 0.733 - -
12. si:ch211-196l7.4 ENSDARG00000095451 3766 1.488 - 0.740 - - - - - 0.748 - si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
13. otomp ENSDARG00000040306 682 1.486 - - - - - - 0.747 0.739 - otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1]
14. slc25a32a ENSDARG00000089791 511 1.47 - - 0.730 - - 0.740 - - - solute carrier family 25 (mitochondrial folate carrier), member 32a [Source:ZFIN;Acc:ZDB-GENE-040426-758]
15. vta1 ENSDARG00000013732 6072 1.461 - 0.726 - - - - - 0.735 - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
16. adar ENSDARG00000012389 520 1.42 - - - - - 0.711 0.709 - - adenosine deaminase, RNA-specific [Source:ZFIN;Acc:ZDB-GENE-000616-5]
17. tbcc ENSDARG00000022918 386 0.99 - - - - - - - 0.990 - tubulin folding cofactor C [Source:ZFIN;Acc:ZDB-GENE-041008-103]
18. ppp1r7 ENSDARG00000009740 2606 0.985 - - - - - - - 0.985 - protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:ZFIN;Acc:ZDB-GENE-051113-288]
19. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 0.979 - - - - - - - 0.979 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
20. vrk1 ENSDARG00000018006 1759 0.976 - - - - - - - 0.976 - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
21. dbnlb ENSDARG00000016016 1412 0.973 - - - - - - - 0.973 - drebrin-like b [Source:ZFIN;Acc:ZDB-GENE-050522-293]
22. spred1 ENSDARG00000041449, ENSDARG00000117025 1124 0.972 - - - - - - - 0.972 - sprouty-related, EVH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2338]
23. hmbsb ENSDARG00000055991 3037 0.967 - - - - - - - 0.967 - hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
24. kif5aa ENSDARG00000098936 2428 0.961 - - - - - - - 0.961 - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
25. tial1 ENSDARG00000009525 1856 0.957 - - - - - - - 0.957 - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
26. CCDC134 CCDC134 477 0.951 - - - - - - - 0.951 -
27. pacsin1b ENSDARG00000042128 1051 0.951 - - - - - - - 0.951 - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
28. exoc2 ENSDARG00000055610, ENSDARG00000109455 950 0.947 - - - - - - - 0.947 - exocyst complex component 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1160]
29. seh1l ENSDARG00000004280 2915 0.941 - - - - - - - 0.941 - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
30. dmrta2 ENSDARG00000039412 328 0.939 - - - - - - - 0.939 - DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
31. usp37 ENSDARG00000040990 637 0.937 - - - - - - - 0.937 - ubiquitin specific peptidase 37 [Source:ZFIN;Acc:ZDB-GENE-061013-802]
32. cetn3 ENSDARG00000011825 1087 0.937 - - - - - - - 0.937 - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
33. slc29a4 ENSDARG00000059690 478 0.935 - - - - - - - 0.935 - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
34. si:dkey-117p18.2 si:dkey-117p18.2 104 0.935 - - - - - - - 0.935 -
35. l3mbtl1a ENSDARG00000014828 119 0.935 - - - - - - - 0.935 - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
36. map9 ENSDARG00000037276, ENSDARG00000115648 581 0.934 - - - - - - - 0.934 - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
37. mul1b ENSDARG00000052527 431 0.934 - - - - - - - 0.934 - mitochondrial E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-050208-236]
38. C20H1orf198 C20H1orf198 246 0.934 - - - - - - - 0.934 -
39. lig4 ENSDARG00000060620 369 0.934 - - - - - - - 0.934 - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
40. ftr15 122 0.934 - - - - - - - 0.934 - finTRIM family, member 15
41. ankrd37 ENSDARG00000056376 131 0.934 - - - - - - - 0.934 - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
42. RNF5 ENSDARG00000075606 1730 0.933 - - - - - - - 0.933 - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
43. GPR101 ENSDARG00000039218 157 0.933 - - - - - - - 0.933 - G protein-coupled receptor 101 [Source:ZFIN;Acc:ZDB-GENE-070914-1]
44. SYNDIG1 ENSDARG00000100751 165 0.933 - - - - - - - 0.933 - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
45. ptprz1b ENSDARG00000020871 435 0.933 - - - - - - - 0.933 - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
46. TMEM218 ENSDARG00000027129 716 0.933 - - - - - - - 0.933 - transmembrane protein 218 [Source:ZFIN;Acc:ZDB-GENE-040426-1232]
47. kif7 ENSDARG00000033099 971 0.933 - - - - - - - 0.933 - kinesin family member 7 [Source:ZFIN;Acc:ZDB-GENE-050307-1]
48. SIPA1 SIPA1 302 0.933 - - - - - - - 0.933 -
49. atn1 ENSDARG00000092067 257 0.932 - - - - - - - 0.932 - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
50. CABZ01087670.1 CABZ01087670.1 411 0.932 - - - - - - - 0.932 -
51. lrrc24 ENSDARG00000101704 224 0.932 - - - - - - - 0.932 - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
52. sult4a1 ENSDARG00000101967 205 0.932 - - - - - - - 0.932 - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
53. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.932 - - - - - - - 0.932 - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
54. si:ch211-113p18.3 ENSDARG00000087835 377 0.931 - - - - - - - 0.931 - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
55. cks2 ENSDARG00000071410, ENSDARG00000116198 966 0.931 - - - - - - - 0.931 - CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
56. DGKI 306 0.93 - - - - - - - 0.930 - diacylglycerol kinase, iota
57. zgc:112962 ENSDARG00000069102 431 0.93 - - - - - - - 0.930 - zgc:112962 [Source:ZFIN;Acc:ZDB-GENE-050410-15]
58. itga11a ENSDARG00000036086, ENSDARG00000111495 254 0.93 - - - - - - - 0.930 - integrin, alpha 11a [Source:ZFIN;Acc:ZDB-GENE-050324-1]
59. ANO8 ANO8 380 0.93 - - - - - - - 0.930 -
60. si:ch211-241n15.2 si:ch211-241n15.2 435 0.93 - - - - - - - 0.930 -
61. scly ENSDARG00000073813 578 0.929 - - - - - - - 0.929 - selenocysteine lyase [Source:ZFIN;Acc:ZDB-GENE-080204-30]
62. bcl9 ENSDARG00000036687 1124 0.929 - - - - - - - 0.929 - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
63. lrrc57 ENSDARG00000043938 1100 0.929 - - - - - - - 0.929 - leucine rich repeat containing 57 [Source:ZFIN;Acc:ZDB-GENE-040718-372]
64. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 0.928 - - - - - - - 0.928 - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
65. atp6ap2 ENSDARG00000008735 5096 0.928 - - - - - - - 0.928 - ATPase H+ transporting accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1960]
66. srp19 ENSDARG00000035699 2624 0.928 - - - - - - - 0.928 - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
67. CABZ01069006.1 CABZ01069006.1 363 0.928 - - - - - - - 0.928 -
68. prpf31 ENSDARG00000095904 526 0.928 - - - - - - - 0.928 - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
69. abcb6b ENSDARG00000074254 600 0.927 - - - - - - - 0.927 - ATP-binding cassette, sub-family B (MDR/TAP), member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-584]
70. GATC ENSDARG00000056855 551 0.927 - - - - - - - 0.927 - glutamyl-tRNA amidotransferase subunit C [Source:ZFIN;Acc:ZDB-GENE-060526-381]
71. vps36 ENSDARG00000057021 636 0.927 - - - - - - - 0.927 - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
72. smcr8a ENSDARG00000052818 559 0.927 - - - - - - - 0.927 - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
73. tceb1a 969 0.927 - - - - - - - 0.927 - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
74. hsd17b12b ENSDARG00000035872 631 0.926 - - - - - - - 0.926 - hydroxysteroid (17-beta) dehydrogenase 12b [Source:ZFIN;Acc:ZDB-GENE-030131-1346]
75. SCML2 ENSDARG00000012949 1310 0.926 - - - - - - - 0.926 - Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
76. csrnp2 ENSDARG00000075972 1650 0.926 - - - - - - - 0.926 - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
77. kidins220b ENSDARG00000017338 1937 0.926 - - - - - - - 0.926 - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
78. syne1b ENSDARG00000063068 786 0.925 - - - - - - - 0.925 - spectrin repeat containing, nuclear envelope 1b [Source:ZFIN;Acc:ZDB-GENE-071218-4]
79. mfsd5 ENSDARG00000015997 570 0.925 - - - - - - - 0.925 - major facilitator superfamily domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040718-468]
80. clstn2 ENSDARG00000060637 548 0.925 - - - - - - - 0.925 - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
81. ek1 ENSDARG00000020080 742 0.925 - - - - - - - 0.925 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
82. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 0.925 - - - - - - - 0.925 - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
83. PREB ENSDARG00000101602 626 0.925 - - - - - - - 0.925 - prolactin regulatory element binding [Source:ZFIN;Acc:ZDB-GENE-040718-385]
84. pmpca ENSDARG00000102607 1024 0.925 - - - - - - - 0.925 - peptidase (mitochondrial processing) alpha [Source:ZFIN;Acc:ZDB-GENE-030131-5809]
85. plat ENSDARG00000062707 491 0.924 - - - - - - - 0.924 - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
86. SPAG9 ENSDARG00000078142 629 0.924 - - - - - - - 0.924 - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
87. asnsd1 830 0.924 - - - - - - - 0.924 - asparagine synthetase domain containing 1, transcript variant X1
88. nexmifb ENSDARG00000029296 416 0.924 - - - - - - - 0.924 - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
89. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 0.923 - - - - - - - 0.923 - atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
90. si:dkey-238o13.4 ENSDARG00000078847 884 0.923 - - - - - - - 0.923 - si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
91. krt1-19d ENSDARG00000023082 902 0.923 - - - - - - - 0.923 - keratin, type 1, gene 19d [Source:ZFIN;Acc:ZDB-GENE-060316-1]
92. elovl4a ENSDARG00000006773 412 0.922 - - - - - - - 0.922 - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
93. tmx1 ENSDARG00000019487 1129 0.922 - - - - - - - 0.922 - thioredoxin-related transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2327]
94. CASKIN2_1 CASKIN2_1 2299 0.922 - - - - - - - 0.922 -
95. tbl3 ENSDARG00000052344 1530 0.921 - - - - - - - 0.921 - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
96. si:dkey-21k10.2 si:dkey-21k10.2 686 0.921 - - - - - - - 0.921 -
97. sec31b ENSDARG00000002916 1792 0.921 - - - - - - - 0.921 - SEC31 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-060418-2]
98. ZNF70_2 ZNF70_2 1866 0.92 - - - - - - - 0.920 -
99. kdm5bb ENSDARG00000003098 531 0.92 - - - - - - - 0.920 - lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
100. mllt3 ENSDARG00000006754 985 0.92 - - - - - - - 0.920 - MLLT3, super elongation complex subunit [Source:ZFIN;Acc:ZDB-GENE-050417-356]

There are 710 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA