Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arr3a

Gene Name Gene ID Reads Annotation
arr3a ENSDARG00000056511, ENSDARG00000114648 192 arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]










Genes with expression patterns similar to arr3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arr3a ENSDARG00000056511, ENSDARG00000114648 192 6 - - 1.000 1.000 1.000 - 1.000 1.000 1.000 arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
2. RCVRN_1 RCVRN_1 46 3.767 - - - 0.964 0.821 - - 1.000 0.982
3. ETV3L ETV3L 67 3.626 - - - 0.819 0.822 - - 0.999 0.986
4. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 3.574 - - - 0.827 0.793 - - 0.964 0.990 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
5. si:ch211-133l5.5 si:ch211-133l5.5 123 2.892 - - - 0.897 - - - 1.000 0.995
6. saga ENSDARG00000012610 63 2.866 - - - 0.918 - - - 0.988 0.960 S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
7. slc6a2 ENSDARG00000016141 49 2.83 - - - - 0.862 - - 0.999 0.969 solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
8. sagb ENSDARG00000038378 28 2.817 - - - - 0.830 - - 0.997 0.990 S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
9. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 2.799 - - - 0.851 - - - 0.995 0.953 retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
10. guca1g ENSDARG00000045737, ENSDARG00000114717 22 2.793 - - - 0.965 0.830 - - - 0.998 guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
11. rpe65a ENSDARG00000007480 52 2.742 - - - 0.969 0.796 - - - 0.977 retinal pigment epithelium-specific protein 65a [Source:ZFIN;Acc:ZDB-GENE-040426-1717]
12. gnb3b ENSDARG00000002696 46 2.708 - - - 0.708 - - - 1.000 1.000 guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
13. TULP1 TULP1 50 2.686 - - - 0.761 - - - 0.992 0.933
14. stxbp1b ENSDARG00000056036, ENSDARG00000112938 84 2.652 - - - - 0.802 - - 0.978 0.872 syntaxin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060531-166]
15. gngt2b ENSDARG00000103543 132 1.995 - - - - - - - 1.000 0.995 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
16. NPFFR1 ENSDARG00000111997 29 1.973 - - - - - - 1.000 - 0.973 neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
17. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 1.964 - - - - - - - 0.997 0.967 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
18. fut9d ENSDARG00000028098 427 1.943 - - - - - - - 0.963 0.980 fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
19. grk7a ENSDARG00000020602 10 1.932 - - - 0.936 - - - - 0.996 G protein-coupled receptor kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050824-1]
20. muc13a ENSDARG00000069559 985 1.918 - - - - - - - 0.985 0.933 mucin 13a, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-061207-26]
21. si:ch211-130m23.2 ENSDARG00000095136 121 1.912 - - - - - - - 0.982 0.930 si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
22. si:ch73-211l2.1 605 1.89 - - - - - - - 0.956 0.934 si:ch73-211l2.1
23. RAPGEF4 ENSDARG00000079872 82 1.87 - - 0.870 - - - 1.000 - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
24. dhrs9 ENSDARG00000019260 250 1.859 - - - - - - - 0.948 0.911 dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
25. aanat2 ENSDARG00000079802 175 1.845 - - - - - - - 0.901 0.944 arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
26. ppp1r3da ENSDARG00000077513 109 1.836 - - - - - - - 0.936 0.900 protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
27. si:ch211-117m20.5 ENSDARG00000091996 7246 1.832 - - - - - - - 0.964 0.868 si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
28. UNC119 UNC119 104 1.826 - - - - 0.830 - - - 0.996
29. BX004785.5 BX004785.5 35 1.805 - - - - - - 0.836 - 0.969
30. zgc:163030 ENSDARG00000069192 2963 1.801 - - - - - - - 0.832 0.969 zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
31. guk1b ENSDARG00000005776 23 1.766 - - - - 0.830 - - - 0.936 guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
32. syt5b ENSDARG00000011640 70 1.758 - - - - 0.799 - - - 0.959 synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
33. tgm1l4 ENSDARG00000101407 800 1.743 - - - - - - - 0.871 0.872 transglutaminase 1 like 4 [Source:ZFIN;Acc:ZDB-GENE-050913-29]
34. ncaldb ENSDARG00000011334 123 1.743 - - - - - - - 0.896 0.847 neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
35. rcvrna ENSDARG00000052223, ENSDARG00000113117 20 1.74 - - - 0.790 - - - - 0.950 recoverin a [Source:ZFIN;Acc:ZDB-GENE-050913-106]
36. phlda3 ENSDARG00000037804 1116 1.739 - - - - - - - 0.924 0.815 pleckstrin homology-like domain, family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-030616-267]
37. opn1lw2 ENSDARG00000044861, ENSDARG00000115709 277 1.735 - - - - - - - 0.768 0.967 opsin 1 (cone pigments), long-wave-sensitive, 2 [Source:ZFIN;Acc:ZDB-GENE-040718-141]
38. scamp2l ENSDARG00000017010 491 1.732 - - - - - - - 0.838 0.894 secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
39. ponzr3 ENSDARG00000088589, ENSDARG00000116407 1373 1.729 - - - - - - - 0.827 0.902 plac8 onzin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-050506-38]
40. rs1 rs1 70 1.71 - - - - 0.765 - - - 0.945
41. wdr4 ENSDARG00000090581 42 1.7 - - 0.700 - - - 1.000 - - WD repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-060810-10]
42. rbp4l ENSDARG00000044684 3292 1.682 - - - - - - - 0.912 0.770 retinol binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-7591]
43. ap1s3b ENSDARG00000027966 1064 1.679 - - - - - - - 0.868 0.811 adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
44. casp9 ENSDARG00000004325 306 1.672 - - - - - - - 0.942 0.730 caspase 9, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-5]
45. cyp26a1 ENSDARG00000033999 1136 1.666 - - - - - - - 0.773 0.893 cytochrome P450, family 26, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-990415-44]
46. zgc:163077 ENSDARG00000101593 60 1.657 - - 0.766 - - - - - 0.891 zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
47. CABZ01048956.1 ENSDARG00000117474 253 1.655 - - - - - - - 0.711 0.944 probable GPI-anchored adhesin-like protein PGA18 [Source:NCBI gene;Acc:108191751]
48. fam105ba fam105ba 93 1.649 - - 0.862 - - - - - 0.787
49. fam46ba 4575 1.648 - - - - - - - 0.849 0.799 family with sequence similarity 46, member Ba
50. npy8br ENSDARG00000005780 15 1.637 - - 0.790 - - - 0.847 - - neuropeptide Y receptor Y8b [Source:ZFIN;Acc:ZDB-GENE-980526-208]
51. otud3 ENSDARG00000022648 263 1.629 - - - - - - - 0.896 0.733 OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
52. CCDC64B CCDC64B 337 1.625 - - - - - - - 0.820 0.805
53. SLC29A4 ENSDARG00000059690 470 1.616 - - - - 0.746 - - - 0.870 solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
54. zgc:109965 ENSDARG00000012126 11 1.614 - - - 0.784 0.830 - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
55. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1.613 - - 0.783 - 0.830 - - - -
56. prelp ENSDARG00000070597 99 1.598 - - - - 0.830 - 0.768 - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
57. nr2e3 ENSDARG00000045904, ENSDARG00000113178 208 1.593 - - - 0.795 0.798 - - - - nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]
58. exosc2 ENSDARG00000028688 726 1.563 - - - - - - - 0.811 0.752 exosome component 2 [Source:ZFIN;Acc:ZDB-GENE-050417-27]
59. tfap2d ENSDARG00000023272 308 1.555 - - - 0.796 0.759 - - - - transcription factor AP-2 delta (activating enhancer binding protein 2 delta) [Source:ZFIN;Acc:ZDB-GENE-050913-99]
60. rgs7bpb ENSDARG00000016742, ENSDARG00000117059 87 1.552 - - 0.798 - - - - - 0.754 regulator of G protein signaling 7 binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-9502]
61. sh3bp5b ENSDARG00000103978 513 1.54 - - - - - - - 0.827 0.713 SH3-domain binding protein 5b (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-040426-2813]
62. Telomerase-vert Telomerase-vert 8 1.54 - - 0.710 - 0.830 - - - -
63. si:zfos-754c12.1 si:zfos-754c12.1 89 1.503 - - 0.756 - - - 0.747 - -
64. fam131c ENSDARG00000037320 6 1.475 - - - 0.710 0.765 - - - - family with sequence similarity 131, member C [Source:ZFIN;Acc:ZDB-GENE-050706-119]
65. pax5 ENSDARG00000037383 319 1.448 - - - 0.726 0.722 - - - - paired box 5 [Source:ZFIN;Acc:ZDB-GENE-001030-2]
66. FBLN7 ENSDARG00000089519 4 1.428 - - - 0.710 - - 0.718 - - fibulin 7 [Source:ZFIN;Acc:ZDB-GENE-170130-2]
67. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - - - - - - 1.000 - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
68. dgkza ENSDARG00000014439 82 1 - - - - - - 1.000 - - diacylglycerol kinase, zeta a [Source:ZFIN;Acc:ZDB-GENE-111104-3]
69. med11 ENSDARG00000086416 13 1 - - - - - - - 1.000 - mediator complex subunit 11 [Source:ZFIN;Acc:ZDB-GENE-091207-2]
70. zgc:172053 ENSDARG00000038321 9 1 - - - - - - 1.000 - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
71. BX682234.1 ENSDARG00000074732 5 1 - - - - - - 1.000 - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
72. sox17 ENSDARG00000101717 11 1 - - - - - - 1.000 - - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
73. SNORA63 SNORA63 7 1 - - - - - - 1.000 - -
74. si:ch211-113a14.15_1 2 1 - - - - - - 1.000 - - si:ch211-113a14.15
75. SNORA81_1 SNORA81_1 8 1 - - - - - - 1.000 - -
76. CU861664.1 CU861664.1 53 1 - - - - - - 1.000 - -
77. GALNT8_1 GALNT8_1 10 1 - - - - - - 1.000 - -
78. C24H8orf34 C24H8orf34 1 1 - - - - - - 1.000 - -
79. zgc:153846 ENSDARG00000040738 1 1 - - - - - - 1.000 - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
80. map2k4a ENSDARG00000063583 38 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060512-98]
81. PEG3_17 PEG3_17 15 1 - - - - - - 1.000 - -
82. slc18b1 ENSDARG00000044047 7 1 - - - - - - 1.000 - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
83. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - - - 1.000 - - monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
84. si:dkey-148b12.4 si:dkey-148b12.4 2 1 - - - - - - 1.000 - -
85. CR792418.1 CR792418.1 1 1 - - - - 1.000 - - - -
86. GPR78 GPR78 17 1 - - - - - - 1.000 - -
87. fam219b ENSDARG00000104637 3 1 - - - - - - 1.000 - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
88. ENSDARG00000091099 ENSDARG00000091099 5 1 - - - - - - 1.000 - -
89. si:dkey-28d5.13 ENSDARG00000077260 3 1 - - - - - - 1.000 - - si:dkey-28d5.13 [Source:ZFIN;Acc:ZDB-GENE-060503-636]
90. CABZ01073112.1 CABZ01073112.1 40 1 - - - - - - 1.000 - -
91. lhx6 ENSDARG00000006896, ENSDARG00000112520 98 1 - - - - - - 1.000 - - LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]
92. MYO1G ENSDARG00000036104 1 1 - - - - - - 1.000 - - myosin IG [Source:HGNC Symbol;Acc:HGNC:13880]
93. psmd2 ENSDARG00000103190 141 1 - - - - - - 1.000 - - proteasome 26S subunit, non-ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1480]
94. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 - - - - 1.000 - - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
95. purg ENSDARG00000099187, ENSDARG00000114450 33 1 - - - - - - 1.000 - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
96. mir10b-2 116 1 - - - - - - 1.000 - - microRNA 10b-2
97. CR457462.1 CR457462.1 11 1 - - - - - - 1.000 - -
98. zgc:66455 ENSDARG00000052375 3 1 - - - - - - 1.000 - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
99. tph1a ENSDARG00000029432, ENSDARG00000114918 24 1 - - - - - - - 1.000 - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
100. nsun5_1 ENSDARG00000043209 3 1 - - - - 1.000 - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]

There are 966 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA