Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arpc5lb

Gene Name Gene ID Reads Annotation
arpc5lb ENSDARG00000035433 726 actin related protein 2/3 complex, subunit 5-like, b [Source:ZFIN;Acc:ZDB-GENE-060531-161]










Genes with expression patterns similar to arpc5lb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arpc5lb ENSDARG00000035433 726 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actin related protein 2/3 complex, subunit 5-like, b [Source:ZFIN;Acc:ZDB-GENE-060531-161]
2. zgc:63863 ENSDARG00000099753 210 1.592 - 0.781 - - - - 0.811 - - zgc:63863 [Source:ZFIN;Acc:ZDB-GENE-040426-1278]
3. ptk2.1 ptk2.1 766 1.542 - 0.756 - - - - 0.786 - -
4. frmd6 ENSDARG00000002332 2698 1.531 - 0.759 - - - - 0.772 - - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
5. psmc1a ENSDARG00000030537 2799 1.524 - 0.785 - - - 0.739 - - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
6. C2H14orf119 C2H14orf119 716 1.501 - - - - - 0.762 0.739 - -
7. pkig ENSDARG00000086471 665 1.455 - 0.724 - - - 0.731 - - - protein kinase (cAMP-dependent, catalytic) inhibitor gamma [Source:ZFIN;Acc:ZDB-GENE-050302-97]
8. ppp1r3b ENSDARG00000044691, ENSDARG00000110639, ENSDARG00000114900 2990 1.436 - 0.722 - 0.714 - - - - - protein phosphatase 1, regulatory subunit 3B [Source:ZFIN;Acc:ZDB-GENE-030131-5496]
9. senp6a ENSDARG00000102923 908 1.434 - 0.713 - - - - 0.721 - - SUMO specific peptidase 6a [Source:ZFIN;Acc:ZDB-GENE-080204-25]
10. C16H1orf43 C16H1orf43 380 0.925 - - - - - 0.925 - - -
11. trim3b ENSDARG00000005397 680 0.92 - - - - - - 0.920 - - tripartite motif containing 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1132]
12. gfm2 ENSDARG00000005561 302 0.918 - - - - - - 0.918 - - G elongation factor, mitochondrial 2 [Source:ZFIN;Acc:ZDB-GENE-060201-3]
13. gas8 ENSDARG00000101431 140 0.912 - - - - - - 0.912 - - growth arrest-specific 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1980]
14. ZBTB8A ENSDARG00000059226 98 0.911 - - - - - - 0.911 - - zinc finger and BTB domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-060421-5153]
15. HERC4 ENSDARG00000059936 369 0.911 - - - - - - 0.911 - - HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-070801-1]
16. egln3 ENSDARG00000032553 280 0.908 - - - - - - 0.908 - - egl-9 family hypoxia-inducible factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2541]
17. ddx55 ENSDARG00000009864 415 0.907 - - - 0.907 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:ZFIN;Acc:ZDB-GENE-021212-1]
18. fosb ENSDARG00000055751 170 0.902 - - - - - - 0.902 - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
19. gnl2 ENSDARG00000098080 565 0.901 - 0.901 - - - - - - - guanine nucleotide binding protein-like 2 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-040426-2317]
20. sco2 ENSDARG00000045555 219 0.898 - - - - - - 0.898 - - SCO2 cytochrome c oxidase assembly protein [Source:ZFIN;Acc:ZDB-GENE-041210-173]
21. CMTM8_1 CMTM8_1 123 0.896 - - - - - - 0.896 - -
22. gemin5 ENSDARG00000079257 152 0.895 - - - - - - 0.895 - - gem (nuclear organelle) associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-031112-9]
23. CABZ01112521.1 CABZ01112521.1 83 0.893 - - - - - - 0.893 - -
24. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 0.893 - - - - - - 0.893 - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
25. usp33 ENSDARG00000016163 651 0.893 - - - - - - 0.893 - - ubiquitin specific peptidase 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2323]
26. gabra1 ENSDARG00000068989 581 0.893 - - - - - - 0.893 - - gamma-aminobutyric acid (GABA) A receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-061013-194]
27. rgs3a ENSDARG00000099746 727 0.892 - - - - - - 0.892 - - regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
28. CCDC34 CCDC34 313 0.891 - - - - - - 0.891 - -
29. dazap1 ENSDARG00000070846, ENSDARG00000114578 525 0.89 - - - - - - 0.890 - - DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]
30. AP5B1 ENSDARG00000078805 62 0.888 - - - - - - 0.888 - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
31. si:zfos-364h11.1 99 0.885 - - - - - - 0.885 - - si:zfos-364h11.1, transcript variant X4
32. ptgis ENSDARG00000060094, ENSDARG00000113227 82 0.884 - - - - - - 0.884 - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
33. scml4 ENSDARG00000017266 194 0.884 - - - - - - 0.884 - - Scm polycomb group protein like 4 [Source:ZFIN;Acc:ZDB-GENE-041210-338]
34. si:ch211-113e8.11 ENSDARG00000076585 721 0.883 - - - - - - 0.883 - - si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
35. wdr47a ENSDARG00000078136 522 0.883 - - - - - - 0.883 - - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
36. CR848706.1 CR848706.1 128 0.881 - - - - - - 0.881 - -
37. rasl12 ENSDARG00000002701 66 0.879 - - - - - - 0.879 - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
38. kcnh7 ENSDARG00000062687 172 0.879 - - - - - - 0.879 - - potassium channel, voltage gated eag related subfamily H, member 7 [Source:ZFIN;Acc:ZDB-GENE-120214-39]
39. raver2 ENSDARG00000075034 290 0.877 - - - - - - 0.877 - - ribonucleoprotein, PTB-binding 2 [Source:ZFIN;Acc:ZDB-GENE-090713-1]
40. GPR158 GPR158 64 0.876 - - - - - - 0.876 - -
41. fer ENSDARG00000012196 83 0.871 - - - - - - 0.871 - - fer (fps/fes related) tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-060526-234]
42. hspa12a ENSDARG00000070603 1474 0.87 - - - - - - 0.870 - - heat shock protein 12A [Source:ZFIN;Acc:ZDB-GENE-031001-1]
43. sirt3 ENSDARG00000035819 101 0.869 - - - - - - 0.869 - - sirtuin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1762]
44. sdf2 ENSDARG00000024026 805 0.869 - - - - - - 0.869 - - stromal cell-derived factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8823]
45. nlgn4a 102 0.869 - - - - - - 0.869 - - neuroligin 4a, transcript variant X1
46. si:ch211-113a14.14_2 si:ch211-113a14.14_2 156 0.867 - - - - - - 0.867 - -
47. kcnk10b ENSDARG00000045956 43 0.866 - - - - - - 0.866 - - potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
48. tmem168a ENSDARG00000068705 498 0.865 - - - - - 0.865 - - - transmembrane protein 168a [Source:ZFIN;Acc:ZDB-GENE-050419-97]
49. FHOD3 FHOD3 422 0.864 - - - - - - 0.864 - -
50. ctdspl2b ENSDARG00000060586 1682 0.864 - - - - - - 0.864 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
51. rnmt ENSDARG00000070553 1743 0.863 - 0.863 - - - - - - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
52. timm17b ENSDARG00000060124 125 0.863 - - - - - - 0.863 - - translocase of inner mitochondrial membrane 17 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-081104-144]
53. si:ch211-89o9.6 ENSDARG00000075639 382 0.863 - - - - - - 0.863 - - si:ch211-89o9.6 [Source:ZFIN;Acc:ZDB-GENE-030131-7155]
54. mrps9 ENSDARG00000061505 1636 0.862 - 0.862 - - - - - - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
55. mlh1 ENSDARG00000025948 130 0.861 - - - - - - 0.861 - - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
56. cbln2a ENSDARG00000074601 12 0.859 - - - - - - 0.859 - - cerebellin 2a precursor [Source:ZFIN;Acc:ZDB-GENE-070912-591]
57. scn3b ENSDARG00000062359 242 0.859 - - - - - - 0.859 - - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
58. cyp27a1.4 ENSDARG00000055159 47 0.858 - - - - - - 0.858 - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
59. MIS12 ENSDARG00000026454 649 0.858 - - - - - - 0.858 - - MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
60. GLIS2 GLIS2 141 0.858 - - - - - - 0.858 - -
61. PRRT4 ENSDARG00000088343 36 0.858 - - - - - - 0.858 - - proline-rich transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-140106-210]
62. nmnat1 ENSDARG00000105748 102 0.858 - - - - - - 0.858 - - nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]
63. olfml2bb ENSDARG00000021480 256 0.857 - - - - - - 0.857 - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
64. slc5a11 ENSDARG00000019932 160 0.857 - - - - - - 0.857 - - solute carrier family 5 (sodium/inositol cotransporter), member 11 [Source:ZFIN;Acc:ZDB-GENE-041114-9]
65. PPP1R35 ENSDARG00000068916 94 0.855 - - - - - - 0.855 - - protein phosphatase 1, regulatory subunit 35 [Source:ZFIN;Acc:ZDB-GENE-060825-232]
66. otx5 ENSDARG00000043483 282 0.855 - - - - - - 0.855 - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
67. zbtb14 ENSDARG00000098273 36 0.854 - - - - - - 0.854 - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
68. BX936303.1 ENSDARG00000103105 26 0.853 - - - - - - 0.853 - -
69. lrp12 ENSDARG00000098845 999 0.853 - - - - - - 0.853 - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
70. CABZ01081752.1 ENSDARG00000099245 84 0.852 - - - - - - 0.852 - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100330167]
71. ptdss1 ptdss1 1143 0.849 - - - - - - 0.849 - -
72. AL929092.1 ENSDARG00000092217 50 0.849 - - - - - - 0.849 - -
73. atad5a ENSDARG00000070568 1840 0.848 - 0.848 - - - - - - - ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
74. bcl7bb ENSDARG00000040396, ENSDARG00000116093 764 0.848 - 0.848 - - - - - - - BCL tumor suppressor 7Bb [Source:ZFIN;Acc:ZDB-GENE-010328-17]
75. lrrc24 ENSDARG00000101704 224 0.847 - - - - - - 0.847 - - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
76. si:ch211-218c6.9 si:ch211-218c6.9 40 0.847 - - - - - - 0.847 - -
77. si:ch73-186j5.4 si:ch73-186j5.4 70 0.847 - - - - - - 0.847 - -
78. cntn1b ENSDARG00000045685 159 0.846 - - - - - - 0.846 - - contactin 1b [Source:ZFIN;Acc:ZDB-GENE-041210-236]
79. cadpsa ENSDARG00000043661 160 0.846 - - - - - - 0.846 - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
80. satb1a ENSDARG00000057649 250 0.846 - - - - - - 0.846 - - SATB homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-031010-36]
81. smtla ENSDARG00000038191 42 0.846 - - - - - - 0.846 - - somatolactin alpha [Source:ZFIN;Acc:ZDB-GENE-060123-2]
82. CASK CASK 1750 0.845 - - - - - - 0.845 - -
83. wash wash 172 0.845 - - - - - - 0.845 - -
84. ulk1a ENSDARG00000062518 10 0.845 - - - - - - 0.845 - - unc-51 like autophagy activating kinase 1a [Source:ZFIN;Acc:ZDB-GENE-080723-31]
85. rbl1 ENSDARG00000008141 1217 0.845 - - - 0.845 - - - - - retinoblastoma-like 1 (p107) [Source:ZFIN;Acc:ZDB-GENE-030131-8179]
86. si:dkeyp-120h9.1 ENSDARG00000020278 3120 0.845 - 0.845 - - - - - - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
87. zdhhc24_1 ENSDARG00000105134, ENSDARG00000110259, ENSDARG00000116301 40 0.845 - - - - - - 0.845 - - zinc finger, DHHC-type containing 24 [Source:ZFIN;Acc:ZDB-GENE-040718-8]
88. hgfb ENSDARG00000079076 168 0.844 - - - - - - 0.844 - - hepatocyte growth factor b [Source:ZFIN;Acc:ZDB-GENE-041014-3]
89. CDH8 172 0.844 - - - - - - 0.844 - - cadherin 8
90. arhgef12b ENSDARG00000100913 1358 0.844 - - - - - - 0.844 - - Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
91. si:dkey-70e17.2 si:dkey-70e17.2 371 0.842 - - - - - - 0.842 - -
92. CU570684.5 CU570684.5 55 0.842 - - - - - - 0.842 - -
93. cbwd ENSDARG00000004318, ENSDARG00000111371 626 0.841 - - - - - - 0.841 - - COBW domain containing [Source:ZFIN;Acc:ZDB-GENE-040426-2388]
94. si:dkey-222l20.1 si:dkey-222l20.1 375 0.841 - - - - - - 0.841 - -
95. zgc:114046 ENSDARG00000091728 68 0.841 - - - - - - 0.841 - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
96. cbx8a ENSDARG00000087327 361 0.84 - - - - - - 0.840 - - chromobox homolog 8a (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040405-1]
97. C19H6orf136 C19H6orf136 1387 0.84 - 0.840 - - - - - - -
98. ccdc94 1417 0.839 - - - - - - 0.839 - - coiled-coil domain containing 94
99. TMEM97 ENSDARG00000040553 530 0.839 - - - - - - 0.839 - - transmembrane protein 97 [Source:ZFIN;Acc:ZDB-GENE-110627-1]
100. BX546499.2 ENSDARG00000093947 26 0.839 - - - - - - 0.839 - -

There are 711 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA