Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arpc3

Gene Name Gene ID Reads Annotation
arpc3 ENSDARG00000057882 10113 actin related protein 2/3 complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040625-107]










Genes with expression patterns similar to arpc3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arpc3 ENSDARG00000057882 10113 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actin related protein 2/3 complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040625-107]
2. adssl ENSDARG00000012399 2271 2.527 - 0.777 - - 0.763 - 0.987 - - adenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
3. arpc2 ENSDARG00000075989 22423 2.337 0.773 0.795 - - 0.769 - - - - actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
4. dynll1 ENSDARG00000058454 33932 1.908 - - - - - 0.927 0.981 - - dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961]
5. rab7 ENSDARG00000020497, ENSDARG00000109813, ENSDARG00000110814 2627 1.884 - - - - - 0.895 0.989 - - RAB7, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-1352]
6. dtnba ENSDARG00000077694 5483 1.849 - - - - - - 0.964 - 0.885 dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
7. meis1 meis1 6937 1.835 - - - - - 0.847 0.988 - -
8. hoxb3a ENSDARG00000029263 5493 1.802 - - - - - 0.819 0.983 - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
9. eif2s3 ENSDARG00000008292 17051 1.792 - - - - - 0.897 - - 0.895 eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
10. eif3s6ip ENSDARG00000101082 18515 1.78 - - - - - 0.801 0.979 - - eukaryotic translation initiation factor 3, subunit 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2138]
11. ndufs7 ENSDARG00000074552, ENSDARG00000111455 10753 1.772 - - - - - 0.794 0.978 - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:ZFIN;Acc:ZDB-GENE-041111-261]
12. lgi2a ENSDARG00000111069 965 1.769 - - - - 0.785 - 0.984 - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
13. lasp1 ENSDARG00000057867 18721 1.756 0.903 - - - - 0.853 - - - LIM and SH3 protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1936]
14. ctdsp1 ENSDARG00000040674 2828 1.747 - - - - 0.760 - 0.987 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
15. fuca1 fuca1 6176 1.745 0.757 - - - - - 0.988 - -
16. fubp1 ENSDARG00000029248 15259 1.736 - - - - - 0.747 0.989 - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
17. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.735 - - - - - - 0.905 - 0.830 eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
18. tuba8l ENSDARG00000042708 48551 1.716 0.806 - - - - - 0.910 - - tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
19. zgc:171775 ENSDARG00000058381, ENSDARG00000114470 5760 1.715 - 0.834 - - - 0.881 - - - zgc:171775 [Source:ZFIN;Acc:ZDB-GENE-030131-4309]
20. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 1.706 0.812 - - - - 0.894 - - - membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
21. anxa1c ENSDARG00000104359 23181 1.7 - - - - - - 0.975 0.725 - annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
22. mrps23 ENSDARG00000033973 2265 1.691 - - - - 0.788 0.903 - - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
23. tspan9b ENSDARG00000045706, ENSDARG00000110620, ENSDARG00000111048 2161 1.687 - - - - 0.814 0.873 - - - tetraspanin 9b [Source:ZFIN;Acc:ZDB-GENE-040704-25]
24. psmd4a ENSDARG00000101295 1410 1.685 - - - - 0.781 - - - 0.904 proteasome 26S subunit, non-ATPase 4a [Source:ZFIN;Acc:ZDB-GENE-040625-104]
25. plscr3b ENSDARG00000069432 8500 1.682 0.803 - - - - 0.879 - - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
26. peli2 ENSDARG00000029045 844 1.671 - - - - 0.795 0.876 - - - pellino E3 ubiquitin protein ligase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-360]
27. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 1.671 - 0.846 - - 0.825 - - - - immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
28. ndufs8a ENSDARG00000051986 17548 1.669 0.793 - - - - 0.876 - - - NADH:ubiquinone oxidoreductase core subunit S8a [Source:ZFIN;Acc:ZDB-GENE-040426-2153]
29. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 1.668 - - - - 0.737 0.931 - - - tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
30. MON1B_1 MON1B_1 697 1.663 - - - - 0.783 0.880 - - -
31. ppp1r14aa ENSDARG00000011239 980 1.662 - - - - 0.754 0.908 - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Aa [Source:ZFIN;Acc:ZDB-GENE-050417-413]
32. idh3b ENSDARG00000044753, ENSDARG00000110992 3965 1.662 - 0.752 - - - - - - 0.910 isocitrate dehydrogenase 3 (NAD+) beta [Source:ZFIN;Acc:ZDB-GENE-040625-174]
33. mtmr2 ENSDARG00000004616 1052 1.643 - - - - 0.757 0.886 - - - myotubularin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-990715-14]
34. ctsba ENSDARG00000055120 18732 1.641 - - - - - - 0.780 - 0.861 cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]
35. ip6k2 ip6k2 3926 1.638 - 0.747 - - - 0.891 - - -
36. sepw1 17630 1.636 - 0.717 - - - 0.919 - - - selenoprotein W, 1
37. APOD APOD 3404 1.636 - - - - 0.718 0.918 - - -
38. si:dkey-42i9.4 ENSDARG00000008049 4752 1.627 - 0.740 - - - - - - 0.887 si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
39. TTYH3 TTYH3 1841 1.621 - - - - 0.731 0.890 - - -
40. adh8b ENSDARG00000024278, ENSDARG00000116820 8008 1.61 - 0.792 - - - 0.818 - - - alcohol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-030529-2]
41. ptprfb ENSDARG00000005754 7178 1.609 - 0.705 - - - 0.904 - - - protein tyrosine phosphatase, receptor type, f, b [Source:ZFIN;Acc:ZDB-GENE-060503-530]
42. mgst2 ENSDARG00000071345 5626 1.605 - - 0.711 - - 0.894 - - - microsomal glutathione S-transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060616-94]
43. coro1ca ENSDARG00000035598 9278 1.604 - 0.821 - - - 0.783 - - - coronin, actin binding protein, 1Ca [Source:ZFIN;Acc:ZDB-GENE-030114-6]
44. csde1_1 ENSDARG00000074758 2759 1.603 0.807 0.796 - - - - - - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
45. arhgdig ENSDARG00000004034 10368 1.603 - - - - 0.768 0.835 - - - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
46. caspb ENSDARG00000052039 4329 1.594 - - - - - - - 0.702 0.892 caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
47. necap2 ENSDARG00000046002 4372 1.593 0.798 - - - 0.795 - - - - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
48. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 1.588 - - - - 0.701 0.887 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
49. SLC25A22 2190 1.588 - - - - 0.705 0.883 - - - solute carrier family 25 (mitochondrial carrier: glutamate), member 22, transcript variant X2
50. apaf1 ENSDARG00000021239 1185 1.587 0.815 - - - 0.772 - - - - apoptotic peptidase activating factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-4]
51. mycla ENSDARG00000006003 1866 1.575 0.821 - - - 0.754 - - - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
52. gfpt2 ENSDARG00000044094 2503 1.568 - - - - 0.786 0.782 - - - glutamine-fructose-6-phosphate transaminase 2 [Source:ZFIN;Acc:ZDB-GENE-071113-1]
53. gsnb ENSDARG00000045262 4382 1.566 - - - - 0.813 - - 0.753 - gelsolin b [Source:ZFIN;Acc:ZDB-GENE-030131-8567]
54. prelid1a ENSDARG00000098671 4745 1.561 - 0.738 - - 0.823 - - - - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
55. adssl1 ENSDARG00000099517 7518 1.558 - 0.807 - - - 0.751 - - - adenylosuccinate synthase like 1 [Source:ZFIN;Acc:ZDB-GENE-040516-18]
56. prkar1aa ENSDARG00000076128 6565 1.558 - 0.772 - - 0.786 - - - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
57. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 1.556 0.820 - - - 0.736 - - - - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
58. wu:fq41a10 wu:fq41a10 7009 1.546 - - - - 0.719 0.827 - - -
59. padi2 ENSDARG00000044167 6765 1.545 - - - - 0.820 - - 0.725 - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
60. knop1 ENSDARG00000077721 2198 1.544 0.811 - - - 0.733 - - - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
61. nckap5l ENSDARG00000079148 4227 1.533 0.809 - - - 0.724 - - - - NCK-associated protein 5-like [Source:ZFIN;Acc:ZDB-GENE-090313-304]
62. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.527 - - - - 0.735 - 0.792 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
63. rpl10 ENSDARG00000025581, ENSDARG00000115128, ENSDARG00000117015 6574 1.515 0.787 - - - 0.728 - - - - ribosomal protein L10 [Source:ZFIN;Acc:ZDB-GENE-030131-8656]
64. itgb1b.1 ENSDARG00000053232 4721 1.512 0.760 0.752 - - - - - - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
65. fam3c ENSDARG00000056152 3833 1.507 - 0.709 - - 0.798 - - - - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
66. zgc:158374 zgc:158374 2227 1.507 0.785 0.722 - - - - - - -
67. CABZ01007794.1 CABZ01007794.1 14290 1.494 - - 0.732 - - 0.762 - - -
68. eva1ba ENSDARG00000102701 1480 1.48 - 0.701 - - 0.779 - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
69. rpl38 ENSDARG00000006413 59590 1.453 - - - - - 0.713 - - 0.740 ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-030131-8752]
70. rpa3 ENSDARG00000002613 2923 1.448 - 0.708 - - 0.740 - - - - replication protein A3 [Source:ZFIN;Acc:ZDB-GENE-040426-977]
71. C24H11orf54 C24H11orf54 719 1.435 - 0.702 - - 0.733 - - - -
72. mpdu1b ENSDARG00000040265 1968 1.428 - 0.710 - - 0.718 - - - - mannose-P-dolichol utilization defect 1b [Source:ZFIN;Acc:ZDB-GENE-040625-135]
73. tmem167a ENSDARG00000035914 3319 1.416 - 0.711 0.705 - - - - - - transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
74. ctnnb1 ENSDARG00000014571 12004 0.996 - - - - - - 0.996 - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
75. zgc:110339 ENSDARG00000046030 8180 0.995 - - - - - - 0.995 - - zgc:110339 [Source:ZFIN;Acc:ZDB-GENE-050417-323]
76. ywhaqa ENSDARG00000042539 7034 0.993 - - - - - - 0.993 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-040122-5]
77. snrnp27 ENSDARG00000035625 9080 0.993 - - - - - - 0.993 - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
78. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 0.991 - - - - - - 0.991 - - GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
79. sub1a ENSDARG00000053446 13383 0.991 - - - - - - 0.991 - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
80. arf6b ENSDARG00000052928 4585 0.991 - - - - - - 0.991 - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
81. h1fx ENSDARG00000054058 4075 0.99 - - - - - - 0.990 - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
82. cdh1 ENSDARG00000102750 8654 0.99 - - - - - - 0.990 - - cadherin 1, type 1, E-cadherin (epithelial) [Source:ZFIN;Acc:ZDB-GENE-010606-1]
83. AP2A1 ENSDARG00000054320 5591 0.989 - - - - - - 0.989 - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
84. TNRC6C_1 TNRC6C_1 6574 0.989 - - - - - - 0.989 - -
85. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 0.989 - - - - - - 0.989 - - ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
86. zranb2 ENSDARG00000044332 6723 0.989 - - - - - - 0.989 - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
87. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 0.989 - - - - - - 0.989 - - slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
88. SH3BGRL ENSDARG00000058302 4525 0.988 - - - - - - 0.988 - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
89. mtmr14 ENSDARG00000059642 1405 0.988 - - - - - - 0.988 - - myotubularin related protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2649]
90. rbms1a ENSDARG00000074023 2742 0.988 - - - - - - 0.988 - - RNA binding motif, single stranded interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4967]
91. mapre1b ENSDARG00000002659 9119 0.988 - - - - - - 0.988 - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
92. prkacba ENSDARG00000001782 1340 0.988 - - - - - - 0.988 - - protein kinase, cAMP-dependent, catalytic, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1351]
93. degs1 ENSDARG00000007347 2481 0.988 - - - - - - 0.988 - - delta(4)-desaturase, sphingolipid 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5283]
94. fundc2 ENSDARG00000103740 3856 0.988 - - - - - - 0.988 - - fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]
95. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 0.987 - - - - - - 0.987 - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
96. si:rp71-45k5.4 ENSDARG00000035679 10411 0.987 - - - - - - 0.987 - - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
97. med6 ENSDARG00000034734 2711 0.987 - - - - - - 0.987 - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
98. ARHGAP35 2409 0.987 - - - - - - 0.987 - - Rho GTPase activating protein 35b, transcript variant X2
99. elmo1 ENSDARG00000098753 6966 0.987 - - - - - - 0.987 - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
100. ndufb8 ENSDARG00000010113 11385 0.987 - - - - - - 0.987 - - NADH:ubiquinone oxidoreductase subunit B8 [Source:ZFIN;Acc:ZDB-GENE-040426-1858]

There are 1044 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA