Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for arpc1b

Gene Name Gene ID Reads Annotation
arpc1b ENSDARG00000027063 1532 actin related protein 2/3 complex, subunit 1B [Source:ZFIN;Acc:ZDB-GENE-030131-7414]










Genes with expression patterns similar to arpc1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arpc1b ENSDARG00000027063 1532 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actin related protein 2/3 complex, subunit 1B [Source:ZFIN;Acc:ZDB-GENE-030131-7414]
2. ip6k2 ip6k2 3926 2.335 0.780 - - - - - 0.705 0.850 -
3. rbm8a ENSDARG00000016516 8789 2.255 - - - - - - 0.745 0.724 0.786 RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
4. sec62 ENSDARG00000019951 3724 2.222 - 0.710 - - - - 0.765 0.747 - SEC62 homolog, preprotein translocation factor [Source:ZFIN;Acc:ZDB-GENE-050913-83]
5. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 1.843 - - - - - - - 0.946 0.897 solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
6. THEM4 ENSDARG00000061621 364 1.781 - - - - - - - 0.866 0.915 thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
7. U6 U6 931 1.755 - - - - - - - 0.853 0.902
8. tuft1b ENSDARG00000071010 909 1.707 - - - - - - 0.775 - 0.932 tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
9. arf6b ENSDARG00000052928 4585 1.688 - - - - - - - 0.814 0.874 ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
10. CACUL1 ENSDARG00000021885 691 1.663 - - - - - - 0.771 - 0.892 CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
11. nme3 ENSDARG00000100990 3889 1.649 - - - - - - - 0.798 0.851 NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
12. atp6v0b ENSDARG00000031681 4611 1.643 - 0.818 - - - - 0.825 - - ATPase H+ transporting V0 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-443]
13. ube2kb ENSDARG00000013505, ENSDARG00000114039 3968 1.63 - - - - - - - 0.752 0.878 ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-980605-9]
14. tnfaip3 ENSDARG00000027777 1066 1.63 - - - - - - 0.738 0.892 - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
15. gpr137c ENSDARG00000045289 771 1.621 - 0.823 - - - 0.798 - - - G protein-coupled receptor 137c [Source:ZFIN;Acc:ZDB-GENE-041114-145]
16. id3 ENSDARG00000054823 3484 1.607 - - - - - - 0.716 - 0.891 inhibitor of DNA binding 3 [Source:ZFIN;Acc:ZDB-GENE-020515-1]
17. prkci ENSDARG00000021225 2472 1.599 - - - - - 0.786 0.813 - - protein kinase C, iota [Source:ZFIN;Acc:ZDB-GENE-011105-1]
18. klc2 3058 1.595 - - - - - - - 0.789 0.806 kinesin light chain 2
19. smad3a ENSDARG00000036096, ENSDARG00000117146 2668 1.592 - 0.825 - - - - - 0.767 - SMAD family member 3a [Source:ZFIN;Acc:ZDB-GENE-000509-3]
20. CABZ01038494.1 ENSDARG00000088258 908 1.576 - 0.706 - - - - - 0.870 - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
21. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.567 - - - - - - 0.702 - 0.865 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
22. phyhd1 ENSDARG00000029905 1394 1.563 0.777 - - - - - 0.786 - - phytanoyl-CoA dioxygenase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-159]
23. impdh1b ENSDARG00000029524 7472 1.549 - - - - - - - 0.846 0.703 IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
24. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.537 - - - - - - 0.751 - 0.786 transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
25. gmds ENSDARG00000026629 3976 1.522 - 0.741 - - - - - - 0.781 GDP-mannose 4,6-dehydratase [Source:ZFIN;Acc:ZDB-GENE-050419-45]
26. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.517 - - - - - 0.793 0.724 - - asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
27. klf2b ENSDARG00000040432 1730 1.492 - - - - - 0.733 - - 0.759 Kruppel-like factor 2b [Source:ZFIN;Acc:ZDB-GENE-011109-2]
28. kmt2ca ENSDARG00000079312 2109 1.486 0.746 - - - - 0.740 - - - lysine (K)-specific methyltransferase 2Ca [Source:ZFIN;Acc:ZDB-GENE-080520-3]
29. sfmbt1 ENSDARG00000044915 892 1.483 - 0.763 - - - - 0.720 - - Scm like with four mbt domains 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2592]
30. lims1 ENSDARG00000026985 2072 1.464 - - - - - - 0.706 - 0.758 LIM and senescent cell antigen-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-050522-236]
31. coro1ca ENSDARG00000035598 9278 1.451 - - - - - - 0.723 - 0.728 coronin, actin binding protein, 1Ca [Source:ZFIN;Acc:ZDB-GENE-030114-6]
32. dusp6 ENSDARG00000070914, ENSDARG00000116888 4473 1.447 - - - - - 0.721 0.726 - - dual specificity phosphatase 6 [Source:ZFIN;Acc:ZDB-GENE-030613-1]
33. b3gnt2l ENSDARG00000068219 1875 1.434 - - - - - - 0.719 - 0.715 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2, like [Source:ZFIN;Acc:ZDB-GENE-061207-60]
34. si:dkey-238o14.9 si:dkey-238o14.9 303 1.434 - - - 0.732 - 0.702 - - -
35. waslb ENSDARG00000006283 2160 1.431 - 0.710 - - - - 0.721 - - Wiskott-Aldrich syndrome-like b [Source:ZFIN;Acc:ZDB-GENE-040426-718]
36. atpif1b 8625 1.43 - - - - - 0.701 0.729 - - ATPase inhibitory factor 1b
37. zgc:109868 zgc:109868 7474 1.42 0.715 - - - - - 0.705 - -
38. sft2d1 ENSDARG00000007362 1763 0.951 - - - - - - - - 0.951 SFT2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1350]
39. syt16 ENSDARG00000030761 322 0.949 - - - - - - - 0.949 - synaptotagmin XVI [Source:ZFIN;Acc:ZDB-GENE-090313-210]
40. si:dkey-221j11.3 ENSDARG00000093304 1001 0.944 - - - - - - - - 0.944 si:dkey-221j11.3 [Source:ZFIN;Acc:ZDB-GENE-090313-247]
41. csrp1a ENSDARG00000006603 5188 0.939 - - - - - - - - 0.939 cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
42. gna15.1 ENSDARG00000016364 754 0.938 - - - - - - - - 0.938 guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040801-146]
43. arl6ip5b ENSDARG00000016238 1622 0.935 - - - - - - - - 0.935 ADP-ribosylation factor-like 6 interacting protein 5b [Source:ZFIN;Acc:ZDB-GENE-040718-223]
44. atp6ap1b ENSDARG00000037153 3970 0.934 - - - - - - - - 0.934 ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
45. foxd1 ENSDARG00000029179 726 0.934 - - - - - - - 0.934 - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
46. E2F6 E2F6 1271 0.931 - - - - - - - - 0.931
47. C19H18orf21 C19H18orf21 338 0.93 - - - - - - - - 0.930
48. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 0.928 - - - - - - - - 0.928 si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
49. CHMP4B CHMP4B 1387 0.928 - - - - - - - 0.928 -
50. acads ENSDARG00000030781 1669 0.928 - - - - - - - - 0.928 acyl-CoA dehydrogenase short chain [Source:ZFIN;Acc:ZDB-GENE-040808-64]
51. CR847925.1 CR847925.1 835 0.928 - - - - - - - - 0.928
52. dhx8 ENSDARG00000054707 2088 0.927 - - - - - - - 0.927 - DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-050809-39]
53. ppp6r3 ENSDARG00000013379 2912 0.925 - - - - - - - 0.925 - protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
54. pde4ba ENSDARG00000032868, ENSDARG00000110575 1024 0.924 - - - - - - - - 0.924 phosphodiesterase 4B, cAMP-specific a [Source:ZFIN;Acc:ZDB-GENE-030131-9570]
55. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 0.921 - - - - - - - - 0.921 ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
56. lamc3 ENSDARG00000093572 562 0.921 - - - - - - - - 0.921 laminin, gamma 3 [Source:ZFIN;Acc:ZDB-GENE-060531-121]
57. arfrp1 ENSDARG00000057857 2840 0.921 - - - - - - - 0.921 - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
58. acp1 ENSDARG00000076486 3275 0.92 - - - - - - - - 0.920 acid phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050327-12]
59. ZNF337_22 ZNF337_22 322 0.92 - - - - - - - - 0.920
60. slc25a23a ENSDARG00000005690 824 0.918 - - - - - - - - 0.918 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23a [Source:ZFIN;Acc:ZDB-GENE-121214-154]
61. gorasp1 gorasp1 3075 0.918 - - - - - - - - 0.918
62. zgc:194839 ENSDARG00000078550 4003 0.918 - - - - - - - - 0.918 zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
63. mpv17 ENSDARG00000032431 1225 0.917 - - - - - - - - 0.917 MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
64. PDZD8 ENSDARG00000088699 844 0.916 - - - - - - - - 0.916 PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
65. marveld1 ENSDARG00000011724 1025 0.916 - - - - - - - - 0.916 MARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]
66. bmp2b ENSDARG00000041430, ENSDARG00000115191 894 0.916 - - - - - - - - 0.916 bone morphogenetic protein 2b [Source:ZFIN;Acc:ZDB-GENE-980526-474]
67. ing2 ENSDARG00000104907 1336 0.916 - - - - - - - - 0.916 inhibitor of growth family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-147]
68. creb3l3l ENSDARG00000020926, ENSDARG00000116217 1458 0.915 - - - - - - - 0.915 - cAMP responsive element binding protein 3-like 3 like [Source:ZFIN;Acc:ZDB-GENE-040426-2942]
69. hsd3b7 ENSDARG00000036966, ENSDARG00000111892, ENSDARG00000114115 797 0.915 - - - - - - - - 0.915 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-030131-5673]
70. daam1a ENSDARG00000015059 1460 0.915 - - - - - - - - 0.915 dishevelled associated activator of morphogenesis 1a [Source:ZFIN;Acc:ZDB-GENE-030911-6]
71. narfl ENSDARG00000062216 768 0.915 - - - - - - - - 0.915 nuclear prelamin A recognition factor-like [Source:ZFIN;Acc:ZDB-GENE-070209-119]
72. slc6a19b ENSDARG00000056719 140 0.914 - - - - - - - - 0.914 solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
73. sh3yl1 ENSDARG00000074393 815 0.914 - - - - - - - - 0.914 SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
74. ms4a17a.11 ENSDARG00000094809 1086 0.914 - - - - - - - - 0.914 membrane-spanning 4-domains, subfamily A, member 17A.11 [Source:ZFIN;Acc:ZDB-GENE-050417-157]
75. nudt3b ENSDARG00000042123 311 0.914 - - - - - - - - 0.914 nudix (nucleoside diphosphate linked moiety X)-type motif 3b [Source:ZFIN;Acc:ZDB-GENE-041010-128]
76. mir205 2147 0.914 - - - - - - - - 0.914 microRNA 205
77. il17rd ENSDARG00000098359 1153 0.913 - - - - - - - - 0.913 interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
78. ints10 ENSDARG00000043031 455 0.913 - - - - - - - - 0.913 integrator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-050522-2]
79. zgc:136439 ENSDARG00000009267 720 0.913 - - - - - - - - 0.913 zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
80. ccdc90b ENSDARG00000044626, ENSDARG00000110887 501 0.913 - - - - - - - - 0.913 coiled-coil domain containing 90B [Source:ZFIN;Acc:ZDB-GENE-040724-162]
81. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 0.913 - - - - - - - - 0.913 contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
82. smim8 ENSDARG00000071040 622 0.912 - - - - - - - - 0.912 small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
83. NSMCE2 ENSDARG00000076379 2133 0.912 - - - - - - - - 0.912 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [Source:ZFIN;Acc:ZDB-GENE-081022-128]
84. PCDH20 ENSDARG00000036424, ENSDARG00000101910 90 0.912 - - - - - - - - 0.912 protocadherin 20 [Source:NCBI gene;Acc:100007362]
85. m6pr ENSDARG00000018432 1411 0.912 - - - - - - - - 0.912 mannose-6-phosphate receptor (cation dependent) [Source:ZFIN;Acc:ZDB-GENE-040426-2285]
86. HTR1E 103 0.912 - - - - - - - - 0.912 5-hydroxytryptamine receptor 1E
87. HIP1R HIP1R 490 0.912 - - - - - - - - 0.912
88. nedd8 ENSDARG00000007989 3896 0.912 - - - - - - - - 0.912 neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
89. dhrs3b ENSDARG00000044803 2931 0.912 - - - - - - - - 0.912 dehydrogenase/reductase (SDR family) member 3b [Source:ZFIN;Acc:ZDB-GENE-041010-172]
90. pnp5a ENSDARG00000078619 1461 0.912 - - - - - - - - 0.912 purine nucleoside phosphorylase 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2553]
91. zgc:154006 ENSDARG00000061797 152 0.911 - - - - - - - - 0.911 zgc:154006 [Source:ZFIN;Acc:ZDB-GENE-061013-134]
92. mylkb ENSDARG00000004753 95 0.911 - - - - - - - - 0.911 myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
93. panx1a ENSDARG00000025285 352 0.911 - - - - - - - - 0.911 pannexin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-766]
94. sox8 sox8 109 0.911 - - - - - - - - 0.911
95. fbxl4 ENSDARG00000026941, ENSDARG00000113167 396 0.911 - - - - - - - - 0.911 F-box and leucine-rich repeat protein 4 [Source:ZFIN;Acc:ZDB-GENE-041114-187]
96. def6b ENSDARG00000044524 99 0.911 - - - - - - - - 0.911 differentially expressed in FDCP 6b homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-110408-59]
97. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 0.91 - - - - - - - - 0.910 RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
98. si:ch211-135f11.1 166 0.91 - - - - - - - - 0.910 si:ch211-135f11.1, transcript variant X3
99. TLN2 TLN2 359 0.91 - - - - - - - - 0.910
100. tacc1 ENSDARG00000073753 1127 0.91 - - - - - - - - 0.910 transforming, acidic coiled-coil containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-090521-5]

There are 924 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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