Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arpc1a

Gene Name Gene ID Reads Annotation
arpc1a ENSDARG00000008383 7353 actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]










Genes with expression patterns similar to arpc1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arpc1a ENSDARG00000008383 7353 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
2. reep3 reep3 2536 3.049 0.846 0.725 - 0.712 - - 0.766 - -
3. atp6v1h ENSDARG00000006370 7028 2.613 - - - - - - 0.794 0.861 0.958 ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
4. gpx4b ENSDARG00000076836 8085 2.561 0.792 - - - - - 0.860 0.909 - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
5. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 2.504 - 0.822 - - - 0.893 0.789 - - transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
6. s100v1 ENSDARG00000070427 6633 2.492 0.820 - - - 0.949 0.723 - - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
7. ywhabl ENSDARG00000040287 39045 2.488 0.863 - - - - 0.828 0.797 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
8. ENSDARG00000058255 ENSDARG00000058255 1715 2.485 - 0.743 - - - 0.752 - - 0.990
9. CABZ01007794.1 CABZ01007794.1 14290 2.472 - - 0.746 - 0.762 - - - 0.964
10. col16a1 ENSDARG00000009194 5600 2.458 - 0.727 - - 0.967 0.764 - - - collagen, type XVI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-351]
11. GPA33 2465 2.442 - - - - 0.943 0.739 0.760 - - glycoprotein A33 (transmembrane)
12. txnrd1 11401 2.436 0.891 - - - - 0.840 0.705 - - thioredoxin reductase 1
13. gstp1 ENSDARG00000104068 12698 2.435 0.808 0.796 - - - - - 0.831 - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
14. trpc4apa ENSDARG00000018840 2543 2.425 - - - 0.726 0.968 - 0.731 - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
15. cpsf3 ENSDARG00000027649 6897 2.417 - - - - 0.898 - 0.723 0.796 - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
16. GCA GCA 5211 2.386 0.844 - - - - 0.774 0.768 - -
17. lama5 ENSDARG00000058543 2782 2.334 0.893 0.706 - - - 0.735 - - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
18. ctsf ENSDARG00000063095 4564 2.297 0.861 0.731 - - - - 0.705 - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
19. cyfip1 ENSDARG00000044345 5483 2.293 - 0.791 - - - 0.739 0.763 - - cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
20. CU915738.1 CU915738.1 3723 2.273 - - - - - 0.719 0.735 0.819 -
21. epc1 epc1 1164 1.875 - - - - 0.961 - - 0.914 -
22. si:dkey-228b2.5 1760 1.873 0.913 - - - 0.960 - - - - si:dkey-228b2.5
23. mgst2 ENSDARG00000071345 5626 1.863 0.887 - - - - - - - 0.976 microsomal glutathione S-transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060616-94]
24. psmb2 ENSDARG00000031511 4016 1.86 - - - - 0.966 - - 0.894 - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
25. ttc27 ENSDARG00000007918 1228 1.836 0.869 - - - 0.967 - - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
26. btbd10b ENSDARG00000020252 7251 1.834 - - - - - - 0.851 - 0.983 BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
27. hcfc1b ENSDARG00000012519 3633 1.824 - - - - 0.952 - - 0.872 - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
28. slc48a1b ENSDARG00000026109 1427 1.823 0.859 - - - 0.964 - - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
29. rhoac ENSDARG00000116058 9256 1.819 - - - - - - 0.854 - 0.965 ras homolog gene family, member Ac [Source:ZFIN;Acc:ZDB-GENE-040426-2665]
30. rspo2 ENSDARG00000079570, ENSDARG00000113124 1688 1.818 - - - - - 0.841 - - 0.977 R-spondin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-667]
31. rgs12b ENSDARG00000036774 5088 1.799 0.882 - - - - - - 0.917 - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
32. spata13 ENSDARG00000062837 5330 1.791 0.876 - - - 0.915 - - - - spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
33. PELP1 ENSDARG00000079313 5771 1.782 - - - - - - 0.816 - 0.966 proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
34. col6a2 ENSDARG00000061436 5063 1.777 - 0.826 - - - - - - 0.951 collagen, type VI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070501-7]
35. foxp1a ENSDARG00000004843 3961 1.776 - 0.783 - - - - - - 0.993 forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
36. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 1.766 - - - - - - - 0.787 0.979 solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
37. ftr82 ENSDARG00000055647 3302 1.765 - - - - - 0.773 - - 0.992 finTRIM family, member 82 [Source:ZFIN;Acc:ZDB-GENE-030219-207]
38. ptplb ptplb 6135 1.758 - - - - - - 0.787 - 0.971
39. cplx4b ENSDARG00000059486 3192 1.755 0.868 0.887 - - - - - - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
40. CABZ01044136.1 CABZ01044136.1 2596 1.752 - 0.759 - - - - - - 0.993
41. tfap2c ENSDARG00000040606 4628 1.752 - - - - - 0.822 - 0.930 - transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
42. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 1.75 - - - - - - 0.762 - 0.988 adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
43. antxr1c ENSDARG00000063612 3203 1.749 - - - - - 0.761 - - 0.988 ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
44. npc1 ENSDARG00000017180 3724 1.738 - - - - 0.935 - - 0.803 - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
45. spcs2 ENSDARG00000042823 10032 1.732 - - - - - - 0.813 - 0.919 signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
46. sly1 sly1 2403 1.731 - - - - - 0.782 - 0.949 -
47. ube2e1 ENSDARG00000116649 10656 1.728 0.886 0.842 - - - - - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
48. tm9sf4 ENSDARG00000002536 1684 1.727 - 0.806 - - 0.921 - - - - transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
49. limk2 ENSDARG00000005104 2598 1.723 - - - - 0.967 - 0.756 - - LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
50. ssbp4 ENSDARG00000056483 10196 1.719 - - - - 0.777 - - - 0.942 single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
51. ago3b ENSDARG00000063079 1441 1.713 - 0.723 - - - - - - 0.990 argonaute RISC catalytic component 3b [Source:ZFIN;Acc:ZDB-GENE-060503-452]
52. SRGAP3 ENSDARG00000060309 5353 1.712 - - - - - - - 0.772 0.940 SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
53. vps25 ENSDARG00000059079 3747 1.709 - - - - 0.966 - 0.743 - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
54. galnt7 ENSDARG00000057303 2017 1.708 - 0.745 - - 0.963 - - - - UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-284]
55. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.708 - 0.721 - - - - - - 0.987 cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
56. slc9a3r1 slc9a3r1 743 1.705 - 0.741 - - 0.964 - - - -
57. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 1.7 0.879 0.821 - - - - - - - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
58. slc1a5 ENSDARG00000099186 7580 1.7 - - - - - - 0.751 0.949 - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
59. ostc ENSDARG00000104901 16240 1.698 - - - - 0.837 0.861 - - - oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
60. si:ch211-166a6.5 ENSDARG00000079745 11111 1.698 0.842 0.856 - - - - - - - si:ch211-166a6.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9913]
61. TMEM87A TMEM87A 2407 1.697 - - - - - - 0.705 - 0.992
62. pak2a ENSDARG00000068177 8931 1.695 - - - - 0.922 0.773 - - - p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
63. lsm4 ENSDARG00000023852 6083 1.693 0.787 - - - 0.906 - - - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
64. coro7 ENSDARG00000089616 2141 1.692 - - - - - - 0.771 0.921 - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
65. mllt10 ENSDARG00000045401 7557 1.692 - - - - 0.927 - 0.765 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
66. ifrd1 ENSDARG00000068708 2858 1.692 - 0.727 - - 0.965 - - - - interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
67. CU928061.2 CU928061.2 4550 1.692 - 0.711 - - - - - - 0.981
68. tln1 ENSDARG00000100729 5744 1.687 - 0.830 - - - 0.857 - - - talin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-48]
69. PLEKHA6 ENSDARG00000020328 2076 1.676 - - - - - 0.783 - 0.893 - pleckstrin homology domain containing, family A member 6 [Source:ZFIN;Acc:ZDB-GENE-140106-14]
70. scamp4 ENSDARG00000010531, ENSDARG00000114792 1143 1.673 - 0.726 - - - - - 0.947 - secretory carrier membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050913-40]
71. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.673 0.933 0.740 - - - - - - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
72. letm2 ENSDARG00000077515 9561 1.672 - - - - - - 0.791 0.881 - leucine zipper-EF-hand containing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-090521-4]
73. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.671 - - - - - 0.786 - 0.885 - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
74. notch2 ENSDARG00000043130 4430 1.67 - - - - 0.954 0.716 - - - notch 2 [Source:ZFIN;Acc:ZDB-GENE-000329-4]
75. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.669 0.795 0.874 - - - - - - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
76. arpc5a ENSDARG00000039142 5482 1.667 - 0.723 - - - - - 0.944 - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
77. RABGAP1L ENSDARG00000061757 1967 1.666 0.887 0.779 - - - - - - - RAB GTPase activating protein 1-like [Source:ZFIN;Acc:ZDB-GENE-050208-389]
78. cahz ENSDARG00000011166 5771 1.664 0.859 - - - - - - 0.805 - carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
79. sec61a1 ENSDARG00000021669 20408 1.663 - - - - 0.932 - 0.731 - - Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
80. serpinh1a ENSDARG00000075954 6488 1.663 - - - - - - 0.817 0.846 - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
81. arl4cb ENSDARG00000032708, ENSDARG00000110274 2769 1.662 - 0.710 - - - - - - 0.952 ADP-ribosylation factor-like 4Cb [Source:ZFIN;Acc:ZDB-GENE-040426-2382]
82. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.658 0.704 - - - 0.954 - - - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
83. f11r f11r 16668 1.656 0.880 - - - - 0.776 - - -
84. LRP10 ENSDARG00000054539 1895 1.654 - 0.716 - - - - - 0.938 - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
85. adssl1 ENSDARG00000099517 7518 1.653 - 0.717 - - 0.936 - - - - adenylosuccinate synthase like 1 [Source:ZFIN;Acc:ZDB-GENE-040516-18]
86. snx27a ENSDARG00000033804 2249 1.652 - 0.752 - - - - - 0.900 - sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
87. scaf11 ENSDARG00000045885 3531 1.651 - 0.736 - - - - - 0.915 - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
88. cltcb ENSDARG00000090716 5544 1.651 - - - - 0.951 - 0.700 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
89. chmp2bb ENSDARG00000002190 4629 1.649 0.876 - - - - - 0.773 - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
90. itga6b ENSDARG00000069946, ENSDARG00000110478 1126 1.644 0.869 - - - - - 0.775 - - integrin, alpha 6b [Source:ZFIN;Acc:ZDB-GENE-050320-5]
91. aim1a 2981 1.638 0.874 - - - - - 0.764 - - crystallin beta-gamma domain containing 1a, transcript variant X1
92. wsb1 ENSDARG00000021343 3828 1.633 - 0.723 - - 0.910 - - - - WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
93. si:ch211-11k18.4 ENSDARG00000087869 3298 1.632 - - - - - 0.709 - 0.923 - si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
94. nufip2 ENSDARG00000069066 3965 1.632 - - - - - 0.822 0.810 - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
95. pgrmc1 ENSDARG00000054172 5423 1.631 0.891 0.740 - - - - - - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
96. ext2 ENSDARG00000056648 1322 1.629 0.875 - - - - - 0.754 - - exostosin glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041124-3]
97. rabac1 ENSDARG00000004171 2708 1.627 - 0.742 - - - - - 0.885 - Rab acceptor 1 (prenylated) [Source:ZFIN;Acc:ZDB-GENE-040625-146]
98. tet3 ENSDARG00000062646 6672 1.626 - - - - 0.915 - 0.711 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
99. coro1ca ENSDARG00000035598 9278 1.626 - - - 0.774 - - 0.852 - - coronin, actin binding protein, 1Ca [Source:ZFIN;Acc:ZDB-GENE-030114-6]
100. slc39a7 ENSDARG00000104451 6368 1.624 - - - - - - 0.755 0.869 - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]

There are 1514 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA