Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arl3

Gene Name Gene ID Reads Annotation
arl3 ENSDARG00000071409, ENSDARG00000113228 2130 ADP-ribosylation factor-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7518]










Genes with expression patterns similar to arl3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arl3 ENSDARG00000071409, ENSDARG00000113228 2130 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ADP-ribosylation factor-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7518]
2. cdk6 ENSDARG00000070228 1778 2.194 0.704 - - - 0.740 - 0.750 - - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
3. kidins220b ENSDARG00000017338 1937 2.182 0.703 - - - 0.742 - 0.737 - - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
4. TBC1D8B ENSDARG00000062192 1031 1.78 - - - - 0.997 0.783 - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
5. fscn1a ENSDARG00000059680 3999 1.552 - - - - - - 0.719 0.833 - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
6. arl4d ENSDARG00000045074, ENSDARG00000114046 2237 1.533 0.801 - - - 0.732 - - - - ADP-ribosylation factor-like 4D [Source:ZFIN;Acc:ZDB-GENE-030131-2293]
7. CCDC106 CCDC106 1908 1.511 - - - 0.764 0.747 - - - -
8. brd3b ENSDARG00000100129 6387 1.504 - - - - - - 0.751 0.753 - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
9. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.496 - - - 0.704 - - 0.792 - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
10. arl14ep ENSDARG00000001210 3029 1.482 - 0.711 - 0.771 - - - - - ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
11. crnkl1 ENSDARG00000007901 1952 1.478 - 0.723 - - - - 0.755 - - crooked neck pre-mRNA splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-694]
12. si:dkeyp-113d7.1 ENSDARG00000059109 2145 1.474 - - - - - 0.745 0.729 - - si:dkeyp-113d7.1 [Source:ZFIN;Acc:ZDB-GENE-030131-755]
13. HNRNPA2B1 HNRNPA2B1 14997 1.467 - - - - 0.740 - 0.727 - -
14. setb ENSDARG00000003920 21788 1.463 - - - - 0.761 - 0.702 - - SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
15. pou2f1b ENSDARG00000007996 2172 1.462 - - - - 0.743 - 0.719 - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
16. isl2a ENSDARG00000003971 971 1.457 - - - - - 0.720 0.737 - - ISL LIM homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-562]
17. smarce1 ENSDARG00000016871 9628 1.448 - - - - - - 0.706 0.742 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
18. uap1 ENSDARG00000052170 1168 1.445 - - - - 0.741 0.704 - - - UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1233]
19. mbd3a ENSDARG00000061774 4047 1.445 - - - - 0.707 0.738 - - - methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
20. hyou1 ENSDARG00000013670 4172 1.437 - - - - 0.719 0.718 - - - hypoxia up-regulated 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5344]
21. tead1a ENSDARG00000028159 3574 1.436 - - - - 0.729 - 0.707 - - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
22. RNF38 ENSDARG00000062055 3901 1.434 0.701 - - - 0.733 - - - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
23. fzd3a ENSDARG00000021664 1958 1.422 - - - - - - 0.709 - 0.713 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
24. gro2 gro2 1404 1.418 - - - - - 0.714 0.704 - -
25. RABGAP1L ENSDARG00000061757 1967 1.414 - 0.701 - - - 0.713 - - - RAB GTPase activating protein 1-like [Source:ZFIN;Acc:ZDB-GENE-050208-389]
26. ilf2 ENSDARG00000014591 14543 0.974 - - - - 0.974 - - - - interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
27. col4a5 ENSDARG00000052063 19251 0.938 - - - - 0.938 - - - - collagen, type IV, alpha 5 (Alport syndrome) [Source:ZFIN;Acc:ZDB-GENE-030131-2281]
28. rpa1 ENSDARG00000003938 4403 0.933 - - - - 0.933 - - - - replication protein A1 [Source:ZFIN;Acc:ZDB-GENE-030912-3]
29. ptbp1a ENSDARG00000019362 6290 0.921 - - - - 0.921 - - - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
30. ACVR2B 6615 0.912 - - - - 0.912 - - - - activin A receptor, type IIB
31. gnb4b ENSDARG00000115383 7457 0.912 - - - - 0.912 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
32. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 0.885 - - - - - - - 0.885 - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
33. trim37 ENSDARG00000076473 115 0.868 - - - - - 0.868 - - - tripartite motif containing 37 [Source:ZFIN;Acc:ZDB-GENE-030131-2957]
34. adrbk2 1037 0.864 - - - - - 0.864 - - - adrenergic, beta, receptor kinase 2, transcript variant X1
35. zswim5 ENSDARG00000055900 4243 0.854 - - - - - - 0.854 - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
36. trps1 ENSDARG00000104082 918 0.847 - - - - - - 0.847 - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
37. prmt1 ENSDARG00000010246 11311 0.846 - - - - 0.846 - - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
38. cdca8 ENSDARG00000043137 7541 0.844 - - - - - 0.844 - - - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
39. nfatc2ip ENSDARG00000011360 603 0.841 - 0.841 - - - - - - - nuclear factor of activated T cells 2 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-9520]
40. LENG8 ENSDARG00000076805, ENSDARG00000113326 4021 0.836 - - - - - - 0.836 - - leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
41. stk38l ENSDARG00000045482 266 0.835 - - - - - 0.835 - - - serine/threonine kinase 38 like [Source:ZFIN;Acc:ZDB-GENE-040426-798]
42. tsn ENSDARG00000041830, ENSDARG00000111147 1268 0.827 - - - - - - 0.827 - - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
43. kntc1 ENSDARG00000101670 859 0.825 - - - - - 0.825 - - - kinetochore associated 1 [Source:ZFIN;Acc:ZDB-GENE-050208-92]
44. colgalt1 ENSDARG00000073974 1473 0.824 - - - - - 0.824 - - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
45. ube4b ENSDARG00000037017 8012 0.823 - - - - - 0.823 - - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
46. parp1 ENSDARG00000019529 6787 0.823 - - - - - - - 0.823 - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
47. casp9 ENSDARG00000004325 306 0.819 - - - - - 0.819 - - - caspase 9, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-5]
48. gpc1a ENSDARG00000019341, ENSDARG00000110513 935 0.818 - - - - - 0.818 - - - glypican 1a [Source:ZFIN;Acc:ZDB-GENE-051120-147]
49. FP102892.2 FP102892.2 809 0.815 - - - - - - 0.815 - -
50. kctd5 kctd5 13455 0.814 - - - - 0.814 - - - -
51. si:dkey-226l10.6 ENSDARG00000087483 1651 0.813 - - - - - - - 0.813 - si:dkey-226l10.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1550]
52. GRAMD4 GRAMD4 1967 0.812 - - - - - 0.812 - - -
53. casc5 1487 0.81 - - - - - - 0.810 - - cancer susceptibility candidate 5, transcript variant X3
54. syf2 ENSDARG00000004706 2463 0.808 - 0.808 - - - - - - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
55. tor1 ENSDARG00000077950 1027 0.808 - 0.808 - - - - - - - torsin family 1 [Source:ZFIN;Acc:ZDB-GENE-080917-50]
56. polr2eb ENSDARG00000026183 2174 0.806 - - - - - 0.806 - - - polymerase (RNA) II (DNA directed) polypeptide E, b [Source:ZFIN;Acc:ZDB-GENE-040801-83]
57. pip5k1ab ENSDARG00000024642 1988 0.806 - - - - - - - 0.806 - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
58. rpl14 ENSDARG00000103433 69914 0.805 - - - - 0.805 - - - - ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-030131-2085]
59. kpnb3 ENSDARG00000040245 7967 0.805 - - - - - 0.805 - - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
60. ankrd13c ENSDARG00000103831 3593 0.803 - - - - - 0.803 - - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
61. homez homez 1875 0.803 - - - - - - 0.803 - -
62. ect2 ENSDARG00000007278 1193 0.801 - - - - - - 0.801 - - epithelial cell transforming 2 [Source:ZFIN;Acc:ZDB-GENE-040831-2]
63. nckap1 ENSDARG00000060853 3540 0.8 - - - - - 0.800 - - - NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
64. si:ch73-299h12.6 ENSDARG00000101319 373 0.799 - - - - - 0.799 - - - si:ch73-299h12.6 [Source:ZFIN;Acc:ZDB-GENE-081031-44]
65. meaf6 ENSDARG00000101216 6865 0.796 - - - 0.796 - - - - - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
66. MAF1 ENSDARG00000013122 6899 0.795 - - - - - - - 0.795 - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
67. puf60b ENSDARG00000001241 13827 0.795 - - - - 0.795 - - - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
68. nup107 ENSDARG00000016010 1043 0.794 - - - 0.794 - - - - - nucleoporin 107 [Source:ZFIN;Acc:ZDB-GENE-041210-245]
69. hmgcl ENSDARG00000021220 2468 0.793 - 0.793 - - - - - - - 3-hydroxy-3-methylglutaryl-CoA lyase [Source:ZFIN;Acc:ZDB-GENE-040426-958]
70. pola2 ENSDARG00000015070 2286 0.793 - 0.793 - - - - - - - polymerase (DNA directed), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-778]
71. pias4a ENSDARG00000007081 4264 0.792 - 0.792 - - - - - - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
72. saal1 ENSDARG00000018681, ENSDARG00000109471 480 0.792 - - - - - 0.792 - - - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
73. hn1b hn1b 7325 0.791 - - - - - - 0.791 - -
74. TNKS TNKS 2775 0.791 - - - - - - - 0.791 -
75. si:dkey-28b4.8 ENSDARG00000002840 1277 0.791 - - - - - - - 0.791 - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
76. tyms ENSDARG00000042894 3068 0.791 - - - 0.791 - - - - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
77. zgc:174906 ENSDARG00000075314 2187 0.788 - - - - - - 0.788 - - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
78. zmiz1a ENSDARG00000074502 3920 0.788 - - - - - - 0.788 - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
79. gpr137 ENSDARG00000037244 801 0.788 - - - - - 0.788 - - - G protein-coupled receptor 137 [Source:ZFIN;Acc:ZDB-GENE-040718-443]
80. chfr ENSDARG00000075347 664 0.787 - - - - - - - 0.787 - checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030131-3522]
81. dis3l2 ENSDARG00000033259 1509 0.787 - - - - - 0.787 - - - DIS3 like 3'-5' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-070705-171]
82. uhrf1 ENSDARG00000103409 3282 0.786 - - - 0.786 - - - - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
83. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 0.786 - - - - - - 0.786 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
84. syncrip ENSDARG00000040184 24690 0.784 - - - - 0.784 - - - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
85. ildr2 ENSDARG00000014180 791 0.784 - - - 0.784 - - - - - immunoglobulin-like domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050706-83]
86. Mar-02 Mar-02 1812 0.783 - - - - - - - 0.783 -
87. lysmd2 ENSDARG00000091771, ENSDARG00000112692 1102 0.783 - - - 0.783 - - - - - LysM, putative peptidoglycan-binding, domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-250]
88. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 0.783 - - - - - - - 0.783 - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
89. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 0.783 - 0.783 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
90. UBE2S ENSDARG00000031775, ENSDARG00000114827 1890 0.783 - - - - - 0.783 - - - ubiquitin-conjugating enzyme E2S [Source:ZFIN;Acc:ZDB-GENE-050913-92]
91. fam32al fam32al 5716 0.782 - - - - - - - 0.782 -
92. sox3 ENSDARG00000053569 12016 0.781 - - - - 0.781 - - - - SRY (sex determining region Y)-box 3 [Source:ZFIN;Acc:ZDB-GENE-980526-333]
93. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 0.781 - - - - - - 0.781 - - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
94. ugt1ab 545 0.781 - - - - - 0.781 - - - UDP glucuronosyltransferase 1 family a, b
95. tet2 ENSDARG00000076928 2190 0.78 - - - 0.780 - - - - - tet methylcytosine dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-090312-98]
96. sptbn2 ENSDARG00000053956 8452 0.78 - 0.780 - - - - - - - spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
97. ptpn1 ENSDARG00000007923 3647 0.78 - 0.780 - - - - - - - protein tyrosine phosphatase, non-receptor type 1 [Source:ZFIN;Acc:ZDB-GENE-980605-23]
98. RALGDS RALGDS 992 0.78 - - - - - 0.780 - - -
99. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 0.779 - - - - - - 0.779 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
100. creld2 ENSDARG00000029071, ENSDARG00000116264 333 0.779 - - - - - - 0.779 - - cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]

There are 494 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA