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Results for arid4a

Gene Name Gene ID Reads Annotation
arid4a ENSDARG00000043873 4176 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]










Genes with expression patterns similar to arid4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arid4a ENSDARG00000043873 4176 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
2. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 3.266 - - 0.942 - - 0.727 0.761 - 0.836 YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
3. st8sia2 ENSDARG00000018788 2183 2.522 - 0.974 - - 0.703 - - - 0.845 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
4. srsf11 ENSDARG00000098574 12801 2.486 - 0.845 0.810 - - - 0.831 - - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
5. txnl4a ENSDARG00000036190 2048 2.458 - - 0.941 - - - 0.716 - 0.801 thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
6. u2af2b ENSDARG00000011740 6946 2.422 - - - - - 0.829 0.753 - 0.840 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
7. setb ENSDARG00000003920 21788 2.413 - - - 0.820 - 0.740 0.853 - - SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
8. otub1b ENSDARG00000011462 4329 2.413 - 0.961 - - - 0.705 - - 0.747 OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
9. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 2.41 - 0.959 - - - - 0.701 - 0.750 nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
10. mcts1 ENSDARG00000025972 4662 2.402 - 0.968 - - - - 0.731 - 0.703 malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
11. patl1 ENSDARG00000017423 2744 2.387 - 0.956 - - 0.721 - 0.710 - - protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
12. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 2.377 - 0.926 - 0.713 - - - - 0.738 NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
13. sun1 ENSDARG00000055350 3622 2.376 - - 0.949 - 0.703 - 0.724 - - Sad1 and UNC84 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-551]
14. ppm1da ENSDARG00000009273 7713 2.345 - - - - - 0.767 0.723 - 0.855 protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
15. asxl1 ENSDARG00000036956, ENSDARG00000115751 2955 2.336 - - - - - 0.737 0.755 - 0.844 ASXL transcriptional regulator 1 [Source:ZFIN;Acc:ZDB-GENE-091116-9]
16. ube4b ENSDARG00000037017 8012 2.327 - - - - - 0.840 0.739 - 0.748 ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
17. yy1a ENSDARG00000042796 4982 2.299 - - - 0.744 - 0.783 0.772 - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
18. srpr 5148 2.29 - 0.785 - 0.741 - - - - 0.764 signal recognition particle receptor (docking protein)
19. arih2 ENSDARG00000012848 7087 2.237 - - - 0.723 - 0.785 0.729 - - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
20. kdm5c ENSDARG00000006124 4389 2.23 - - - - 0.739 - 0.717 - 0.774 lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
21. MAP4_1 MAP4_1 1153 1.93 - 0.976 0.954 - - - - - -
22. anapc10 ENSDARG00000090152 1406 1.918 - 0.976 0.942 - - - - - - anaphase promoting complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060224-2]
23. srp54 ENSDARG00000098367 2301 1.899 - 0.949 0.950 - - - - - - signal recognition particle 54 [Source:ZFIN;Acc:ZDB-GENE-040426-818]
24. ktn1 ENSDARG00000032802 6251 1.825 - 0.907 0.918 - - - - - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
25. ankrd12 ENSDARG00000052419 2579 1.806 - - 0.953 - - 0.853 - - - ankyrin repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-040426-846]
26. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.796 - 0.954 - - - - - - 0.842 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
27. cwc25 ENSDARG00000003382 2134 1.79 - - 0.961 - - - - - 0.829 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
28. lsm4 ENSDARG00000023852 6083 1.782 - 0.905 0.877 - - - - - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
29. sarnp ENSDARG00000059357 4768 1.769 - - 0.943 - - - - - 0.826 SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
30. derl1 ENSDARG00000021905 4698 1.766 - 0.960 - - - - - - 0.806 derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
31. ik ENSDARG00000004161 3132 1.757 - 0.967 - - - - - - 0.790 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
32. zgc:110425 ENSDARG00000058479 5216 1.755 - 0.885 0.870 - - - - - - zgc:110425 [Source:ZFIN;Acc:ZDB-GENE-050522-103]
33. fam222ba ENSDARG00000059886 1648 1.751 - 0.973 - - - - - - 0.778 family with sequence similarity 222, member Ba [Source:ZFIN;Acc:ZDB-GENE-060526-355]
34. PSIP1 PSIP1 5252 1.747 - - 0.938 - - - - - 0.809
35. tead1a ENSDARG00000028159 3574 1.736 - - 0.969 - - - 0.767 - - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
36. hdac4 ENSDARG00000098349 1370 1.733 - - 0.953 - - - - - 0.780 histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
37. rab14 ENSDARG00000074246 4084 1.725 - 0.979 - - - - 0.746 - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
38. nrp1a ENSDARG00000102153 4154 1.722 - 0.982 - - - - - - 0.740 neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
39. sel1l ENSDARG00000004581 2246 1.718 - 0.949 - - - - 0.769 - - SEL1L, ERAD E3 ligase adaptor subunit [Source:ZFIN;Acc:ZDB-GENE-041001-122]
40. FBXW7 ENSDARG00000060994 1675 1.718 - - 0.950 - - - 0.768 - - F-box and WD repeat domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-090313-79]
41. BAZ2B BAZ2B 3285 1.716 - 0.961 - - - - 0.755 - -
42. znf503 ENSDARG00000018492 5974 1.711 - 0.931 - - - - 0.780 - - zinc finger protein 503 [Source:ZFIN;Acc:ZDB-GENE-031113-5]
43. bcar1 ENSDARG00000056525 6563 1.711 - 0.977 - 0.734 - - - - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
44. tmem30aa ENSDARG00000030236 2842 1.705 - 0.981 - - - - 0.724 - - transmembrane protein 30Aa [Source:ZFIN;Acc:ZDB-GENE-040704-26]
45. ppp1r14c ENSDARG00000077341 1587 1.704 - - 0.952 - - - - - 0.752 protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
46. magoh ENSDARG00000038635, ENSDARG00000109837 2880 1.703 - - 0.957 - - - 0.746 - - mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
47. supt6h ENSDARG00000006524 3221 1.702 - - - - - - 0.842 - 0.860 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
48. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.7 - 0.947 - - - 0.753 - - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
49. kifc1 ENSDARG00000001558 6658 1.698 - - - - - - 0.850 - 0.848 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
50. sash1a ENSDARG00000007179 2497 1.697 - 0.984 - - - - 0.713 - - SAM and SH3 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9960]
51. mtfr1l ENSDARG00000003940, ENSDARG00000111141 3047 1.695 - 0.981 - - - - 0.714 - - mitochondrial fission regulator 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-6228]
52. FP016176.1 FP016176.1 7030 1.695 - - 0.963 - - - - - 0.732
53. emd ENSDARG00000095774, ENSDARG00000114017 1640 1.692 - 0.957 - - - - 0.735 - - emerin (Emery-Dreifuss muscular dystrophy) [Source:ZFIN;Acc:ZDB-GENE-070501-2]
54. seh1l ENSDARG00000004280 2915 1.691 - 0.978 - - - - 0.713 - - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
55. UBL4A UBL4A 1115 1.69 - 0.974 - - - - - - 0.716
56. skia ENSDARG00000042151 1850 1.69 - 0.972 - - 0.718 - - - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
57. ncoa5 ENSDARG00000016345 5765 1.69 - 0.903 - - - - 0.787 - - nuclear receptor coactivator 5 [Source:ZFIN;Acc:ZDB-GENE-040912-155]
58. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.686 - 0.885 - - - - 0.801 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
59. prpf4ba ENSDARG00000008784 936 1.686 - - 0.955 - - - - - 0.731 pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]
60. si:rp71-61h23.4 1921 1.685 - 0.941 - - - - - - 0.744 si:rp71-61h23.4
61. G3BP2 ENSDARG00000014790 9380 1.684 - - 0.901 - - 0.783 - - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
62. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 1.682 - 0.869 - - - - 0.813 - - phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
63. srp14 ENSDARG00000115987 3575 1.68 - - 0.945 - - - 0.735 - - signal recognition particle 14 [Source:ZFIN;Acc:ZDB-GENE-050913-131]
64. dcaf13 ENSDARG00000002267 2435 1.672 - 0.891 - - - - - - 0.781 ddb1 and cul4 associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-703]
65. bnip3la ENSDARG00000025468 3097 1.671 - - - - - 0.879 - - 0.792 BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
66. brd7 ENSDARG00000008380 3654 1.671 - - 0.970 - - - 0.701 - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
67. si:dkey-147f3.4_1 ENSDARG00000071029, ENSDARG00000092077 2259 1.664 - 0.957 - - - - 0.707 - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
68. csnk1da ENSDARG00000008370 3469 1.663 - 0.935 - - - - 0.728 - - casein kinase 1, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-825]
69. selt1a 9746 1.66 - 0.958 - - - 0.702 - - - selenoprotein T, 1a
70. TNRC6A ENSDARG00000079688 14433 1.656 - 0.801 - - - - 0.855 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
71. mark2a ENSDARG00000079905 1765 1.655 - - 0.952 - - - 0.703 - - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
72. homez homez 1875 1.654 - 0.888 - - - 0.766 - - -
73. cdc34b ENSDARG00000012627 3879 1.654 - - - - - - 0.814 - 0.840 cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
74. smad3a ENSDARG00000036096, ENSDARG00000117146 2668 1.648 - - 0.943 - - - 0.705 - - SMAD family member 3a [Source:ZFIN;Acc:ZDB-GENE-000509-3]
75. FP236812.4 FP236812.4 1244 1.648 - - 0.946 - 0.702 - - - -
76. clstn1 ENSDARG00000031720 5286 1.647 - 0.944 - - - - - - 0.703 calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
77. Sep-02 Sep-02 10074 1.641 - 0.873 - - - - 0.768 - -
78. arhgef4 ENSDARG00000012914 1464 1.639 - - - - - 0.831 - - 0.808 Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
79. pdia4 ENSDARG00000018491 1914 1.637 - - 0.913 - - - 0.724 - - protein disulfide isomerase family A, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5493]
80. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.63 - - - - - 0.733 - - 0.897 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
81. ube2na ENSDARG00000008748 4273 1.629 - 0.857 - - - - 0.772 - - ubiquitin-conjugating enzyme E2Na [Source:ZFIN;Acc:ZDB-GENE-040426-2873]
82. psma4 ENSDARG00000045928 5112 1.628 - 0.926 - - 0.702 - - - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
83. zfand3 ENSDARG00000052833 2682 1.623 - 0.914 - - 0.709 - - - - zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
84. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.621 - - - - - - 0.764 - 0.857 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
85. atp6v1d ENSDARG00000011175 8331 1.62 - 0.895 - - - 0.725 - - - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
86. EIF1B ENSDARG00000029445 5034 1.612 - - - - - - 0.797 - 0.815 eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
87. srsf6b ENSDARG00000016783 9926 1.612 - - - - - - 0.778 - 0.834 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
88. cnot3a ENSDARG00000007135 3084 1.607 - - - - - 0.810 - - 0.797 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
89. grb2b ENSDARG00000038059 9050 1.605 - - - - - 0.735 0.870 - - growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
90. nsa2 ENSDARG00000007708 6329 1.601 - - 0.900 - - 0.701 - - - NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-488]
91. dock7 ENSDARG00000078675 1995 1.6 - - - - 0.736 - - - 0.864 dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
92. lpp ENSDARG00000023578 3581 1.598 - - 0.842 0.756 - - - - - LIM domain containing preferred translocation partner in lipoma [Source:ZFIN;Acc:ZDB-GENE-040426-918]
93. uba1 ENSDARG00000037559 11579 1.584 - - 0.768 - - - 0.816 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
94. tsc22d1 ENSDARG00000038306 2413 1.584 - - - - - - 0.777 - 0.807 TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
95. vmp1 ENSDARG00000012450 2891 1.582 - 0.870 - - - - 0.712 - - vacuole membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8733]
96. gdi1 ENSDARG00000056122 4106 1.581 - - - - - - 0.758 - 0.823 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
97. mcrs1 ENSDARG00000020840 3232 1.58 - - - - - - 0.767 - 0.813 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
98. arpp19b ENSDARG00000039880 4823 1.572 - 0.769 - - - - 0.803 - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
99. CABZ01092303.1 CABZ01092303.1 8825 1.57 - 0.851 - - - - 0.719 - -
100. adipor2 ENSDARG00000101849 3156 1.569 - 0.839 - - - - 0.730 - - adiponectin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-60]

There are 1451 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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