Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arid2

Gene Name Gene ID Reads Annotation
arid2 ENSDARG00000007413 4413 AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]










Genes with expression patterns similar to arid2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arid2 ENSDARG00000007413 4413 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
2. g3bp1 ENSDARG00000017741 7622 3.134 - 0.802 - - - 0.757 0.743 0.832 - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
3. CLSPN 2054 2.894 - - - 0.704 0.727 - 0.707 - 0.756 claspin
4. cbx3a ENSDARG00000003860 4922 2.602 - 0.815 0.917 - - - - 0.870 - chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
5. wu:fb17g07 wu:fb17g07 10567 2.541 - 0.780 0.938 - - - 0.823 - -
6. CABZ01072954.1 CABZ01072954.1 2330 2.533 - 0.729 0.936 - - - - 0.868 -
7. CORO1C CORO1C 5554 2.45 - 0.753 0.947 - - - - - 0.750
8. ppp6r3 ENSDARG00000013379 2912 2.439 - 0.741 0.939 - - - 0.759 - - protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
9. zgc:174906 ENSDARG00000075314 2187 2.43 - - - 0.752 - - 0.746 0.932 - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
10. vdac1 ENSDARG00000045132 8051 2.41 - - 0.905 - 0.760 - 0.745 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
11. gse1 ENSDARG00000062020 2337 2.407 - 0.850 - - - 0.809 0.748 - - Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
12. mybbp1a ENSDARG00000078214 2458 2.407 - 0.786 - - 0.734 - - 0.887 - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
13. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 2.403 - - - 0.739 - - 0.757 0.907 - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
14. sh2b1 ENSDARG00000057679, ENSDARG00000113263 2194 2.403 0.832 0.847 - - - - 0.724 - - SH2B adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-070209-188]
15. leo1 ENSDARG00000055357 1644 2.37 - 0.822 - 0.706 0.842 - - - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
16. gstm gstm 4064 2.356 - 0.806 0.837 - - - 0.713 - -
17. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 2.343 - - - - 0.783 0.804 0.756 - - protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
18. cul4b ENSDARG00000060510 6053 2.329 - - - - 0.798 0.757 0.774 - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
19. RSF1_2 RSF1_2 1343 2.327 - 0.730 - - - - 0.741 0.856 -
20. CBFA2T3 ENSDARG00000079012 6799 2.317 - 0.786 - - - - 0.777 0.754 - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
21. CR936437.1 CR936437.1 6465 2.268 - - - - 0.753 - 0.807 0.708 -
22. wu:fq41a10 wu:fq41a10 7009 2.256 - 0.740 - - 0.802 - 0.714 - -
23. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 2.253 - 0.700 - - 0.745 - 0.808 - - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
24. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 2.236 - - - - - 0.711 - 0.772 0.753 cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
25. ssbp4 ENSDARG00000056483 10196 2.233 - - - 0.712 - - 0.810 - 0.711 single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
26. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 2.223 - 0.749 - - 0.772 0.702 - - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
27. FP016176.1 FP016176.1 7030 2.218 - 0.758 - - - 0.715 0.745 - -
28. skib ENSDARG00000008034 6518 2.206 - 0.752 - - - 0.721 0.733 - - v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
29. ngdn ENSDARG00000045372 782 2.2 - 0.711 - - - - 0.717 0.772 - neuroguidin, EIF4E binding protein [Source:ZFIN;Acc:ZDB-GENE-031030-13]
30. mycla ENSDARG00000006003 1866 2.128 - - - 0.707 0.712 - 0.709 - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
31. onecutl ENSDARG00000040253 2143 1.829 - - 0.939 - - - - 0.890 - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
32. vrk1 ENSDARG00000018006 1759 1.786 - - 0.940 - - - - 0.846 - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
33. xylt1 ENSDARG00000061248 2357 1.785 - - 0.958 - - - - 0.827 - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
34. rpf2 ENSDARG00000043960 2719 1.777 - 0.835 0.942 - - - - - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
35. impdh1b ENSDARG00000029524 7472 1.776 - 0.854 0.922 - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
36. pank1b ENSDARG00000010098 3202 1.772 - - 0.932 - - - - 0.840 - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
37. btg3 ENSDARG00000069065, ENSDARG00000115730 1632 1.767 - - - - 0.864 - - 0.903 - B-cell translocation gene 3 [Source:ZFIN;Acc:ZDB-GENE-031113-19]
38. nktr ENSDARG00000059097 1998 1.758 - - 0.937 - - - 0.821 - - natural killer cell triggering receptor [Source:ZFIN;Acc:ZDB-GENE-030131-1725]
39. pou6f1 ENSDARG00000011570 1501 1.725 - - 0.939 - - - 0.786 - - POU class 6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-530]
40. siah1 ENSDARG00000030871 1590 1.715 - - - - - - 0.831 0.884 - siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
41. tjp1a ENSDARG00000077506 2658 1.713 - 0.773 0.940 - - - - - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
42. tdg tdg 3269 1.709 - - 0.938 - - 0.771 - - -
43. tcf7l1b ENSDARG00000007369 2785 1.707 - 0.872 - - - - 0.835 - - transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
44. srsf9 ENSDARG00000008097 2405 1.703 - - - - 0.803 - - 0.900 - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
45. fignl1 ENSDARG00000016427 636 1.7 0.769 - 0.931 - - - - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
46. smarce1 ENSDARG00000016871 9628 1.698 - - 0.862 - - - 0.836 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
47. yy1a ENSDARG00000042796 4982 1.697 - - 0.947 - - - - - 0.750 YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
48. znf292b ENSDARG00000043973 3791 1.696 - - - - - - 0.849 0.847 - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
49. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 1.694 - - 0.910 - - - - 0.784 - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
50. gpd1l ENSDARG00000040024 2182 1.694 - 0.776 - - - - - 0.918 - glycerol-3-phosphate dehydrogenase 1 like [Source:ZFIN;Acc:ZDB-GENE-041010-220]
51. wdr82 ENSDARG00000014083 3159 1.688 - - 0.936 - - - - - 0.752 WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
52. gins4 ENSDARG00000016044 671 1.688 - - 0.936 - - - 0.752 - - GINS complex subunit 4 (Sld5 homolog) [Source:ZFIN;Acc:ZDB-GENE-040801-59]
53. LPHN2 LPHN2 1971 1.688 - - 0.945 - 0.743 - - - -
54. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.688 - - 0.852 - - - - 0.836 - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
55. eif4h ENSDARG00000042252 6742 1.685 - - - - - - 0.742 0.943 - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
56. ccne2 ENSDARG00000098529 4695 1.684 - - 0.970 - - 0.714 - - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
57. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.683 - - 0.911 - - - 0.772 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
58. dek ENSDARG00000070108 2262 1.68 - - 0.887 - 0.793 - - - - DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
59. max ENSDARG00000024844 6035 1.679 - - 0.900 - 0.779 - - - - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
60. CYTH2 ENSDARG00000028800 2349 1.679 - - - - - - 0.785 0.894 - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
61. eif3ja ENSDARG00000012603 6324 1.677 - - 0.925 - 0.752 - - - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
62. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.676 - - 0.914 - 0.762 - - - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
63. npm1b ENSDARG00000037675 5448 1.675 - - 0.882 - - - 0.793 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
64. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.674 - - - - 0.836 - 0.838 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
65. greb1l ENSDARG00000039196 2085 1.674 - - 0.881 - - - 0.793 - - GREB1 like retinoic acid receptor coactivator [Source:ZFIN;Acc:ZDB-GENE-030131-4022]
66. nup155 ENSDARG00000001777 3417 1.673 - - - - - - 0.841 0.832 - nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
67. smg5 ENSDARG00000041481 1286 1.668 - - 0.944 - 0.724 - - - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
68. polb ENSDARG00000003749 2049 1.665 - - 0.953 - - - 0.712 - - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
69. ZNF618 ENSDARG00000071469 2347 1.665 - - 0.942 - - - 0.723 - - zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
70. prpf31 ENSDARG00000095904 526 1.663 - - - - - - 0.790 0.873 - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
71. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.662 - 0.908 - - - - - - 0.754 E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
72. actr1 ENSDARG00000011611 3879 1.66 - 0.896 - - - - 0.764 - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
73. smad4 smad4 2519 1.657 0.728 - 0.929 - - - - - -
74. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.656 - - 0.937 - 0.719 - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
75. pdzrn3b ENSDARG00000073869 1566 1.652 - 0.728 0.924 - - - - - - PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
76. slc29a4 ENSDARG00000059690 478 1.647 0.780 - - - - - - 0.867 - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
77. tm2d3 ENSDARG00000076618 2310 1.645 - - 0.914 - 0.731 - - - - TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
78. ptpn21 ENSDARG00000062248 2010 1.642 - 0.793 - - - - - 0.849 - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
79. elavl1 11672 1.642 - - - - - 0.748 - 0.894 - ELAV like RNA binding protein 1, transcript variant X3
80. sulf1 ENSDARG00000038428 2748 1.64 - 0.784 - - - - - 0.856 - sulfatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9242]
81. ptplb ptplb 6135 1.638 - - 0.901 - - - - - 0.737
82. cd99l2 ENSDARG00000056722 5036 1.637 - 0.759 0.878 - - - - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
83. kif5bb 1645 1.635 - - 0.877 - - 0.758 - - - kinesin family member 5B, b
84. kidins220b ENSDARG00000017338 1937 1.632 - - - - - - 0.738 0.894 - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
85. CASKIN2_1 CASKIN2_1 2299 1.63 - 0.758 - - - - - 0.872 -
86. ptch2 ENSDARG00000055026 980 1.628 - 0.774 - - - - - 0.854 - patched 2 [Source:ZFIN;Acc:ZDB-GENE-980526-44]
87. pkib ENSDARG00000053110 527 1.624 - - 0.923 - - - 0.701 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
88. tfap4 ENSDARG00000103923 2203 1.624 - - - - 0.802 - 0.822 - - transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
89. hnrnpub ENSDARG00000004735 16496 1.622 - - - - 0.822 - 0.800 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
90. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 1.62 - - 0.907 - - 0.713 - - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
91. myclb ENSDARG00000034956, ENSDARG00000110185 1466 1.619 - 0.809 - - - - 0.810 - - MYCL proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-030131-5561]
92. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.615 - - - - - 0.876 0.739 - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
93. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 1.612 - - - - 0.700 - - 0.912 - immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
94. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.612 - 0.714 0.898 - - - - - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
95. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.608 - - - - - - - 0.856 0.752 brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
96. ppig ENSDARG00000044431 3427 1.607 - - - - 0.744 - - 0.863 - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
97. cct8 ENSDARG00000008243 6843 1.607 - 0.847 - - - - - 0.760 - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
98. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.607 - - 0.757 - - - 0.850 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
99. cth ENSDARG00000074301 3860 1.607 - 0.877 - - - - - 0.730 - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
100. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 1.606 - 0.815 - - - - 0.791 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]

There are 2236 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA