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Results for arid1b

Gene Name Gene ID Reads Annotation
arid1b ENSDARG00000092503 1376 AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]










Genes with expression patterns similar to arid1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arid1b ENSDARG00000092503 1376 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
2. pabpn1 ENSDARG00000045373 4876 2.57 - - 0.891 - - - 0.777 - 0.902 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
3. eif4e3 ENSDARG00000005078 1624 2.551 - - 0.981 - - 0.728 - - 0.842 eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
4. ctnnbip1 ENSDARG00000038954 2519 2.47 0.726 - 0.972 - - - - - 0.772 catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
5. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.463 - - - - - 0.737 0.811 - 0.915 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
6. kif15 ENSDARG00000012073 1936 2.401 - 0.792 - - - 0.700 - - 0.909 kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
7. phc2b_1 ENSDARG00000013224 1316 1.904 - - 0.988 - - - - - 0.916 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
8. paxip1 ENSDARG00000005606 1417 1.891 - - 0.990 - - - - - 0.901 PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
9. gdi1 ENSDARG00000056122 4106 1.868 - - 0.977 - - - - - 0.891 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
10. nploc4 ENSDARG00000100487 1262 1.845 - - 0.982 - - - - - 0.863 NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
11. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.844 - - 0.982 - - - - - 0.862 APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
12. olig2 ENSDARG00000040946 1405 1.835 - - 0.975 - - - - - 0.860 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
13. wu:fc26g07 wu:fc26g07 1165 1.815 - 0.836 0.979 - - - - - -
14. pdzrn3b ENSDARG00000073869 1566 1.81 - - 0.985 - - - - - 0.825 PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
15. tmem248 ENSDARG00000018825 1560 1.808 - - 0.987 - - - - - 0.821 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
16. samm50l ENSDARG00000039681 2465 1.786 - - 0.967 - - - - - 0.819 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
17. ranbp9 ENSDARG00000061048 2687 1.777 - - 0.968 - - - - - 0.809 RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
18. kifc1 ENSDARG00000001558 6658 1.759 - - 0.857 - - - - - 0.902 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
19. cnot3a ENSDARG00000007135 3084 1.757 - - 0.890 - - - - - 0.867 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
20. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.756 - - 0.986 - - - - - 0.770 sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
21. mcts1 ENSDARG00000025972 4662 1.754 - - 0.938 - - - - - 0.816 malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
22. cbfa2t2 ENSDARG00000074337 4323 1.752 - - 0.971 0.781 - - - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
23. gpm6ba ENSDARG00000005739, ENSDARG00000110895 1177 1.745 - - - - - - - 0.841 0.904 glycoprotein M6Ba [Source:ZFIN;Acc:ZDB-GENE-030710-9]
24. cln6a ENSDARG00000077584 1090 1.743 - 0.754 0.989 - - - - - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
25. rpf2 ENSDARG00000043960 2719 1.74 - - 0.964 - - - 0.776 - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
26. syncripl ENSDARG00000026723 3889 1.736 - - - - - - 0.825 - 0.911 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
27. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.736 - - 0.958 - - - - - 0.778 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
28. ZNF618 ENSDARG00000071469 2347 1.735 - - 0.968 - - 0.767 - - - zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
29. clybl ENSDARG00000029729 690 1.73 - - 0.986 - - - - 0.744 - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
30. CT573103.1 ENSDARG00000097550 950 1.729 - - 0.986 - - - - 0.743 -
31. cd99l2 ENSDARG00000056722 5036 1.722 - - 0.872 - - - - - 0.850 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
32. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.716 - - 0.950 - - - - - 0.766 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
33. pnn ENSDARG00000015851 1269 1.71 - - 0.987 - - - - 0.723 - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
34. si:dkey-114c15.7 237 1.707 - - - - - - - 0.833 0.874 si:dkey-114c15.7
35. znf292a ENSDARG00000016763 2253 1.707 - - 0.968 - - - 0.739 - - zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
36. plp1a ENSDARG00000103732 3544 1.706 - - 0.920 - - - - - 0.786 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
37. smg5 ENSDARG00000041481 1286 1.7 - - 0.986 - - - 0.714 - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
38. nadl1.2 695 1.68 - - - - - - - 0.828 0.852 neural adhesion molecule L1.2, transcript variant X1
39. ZBTB16 ZBTB16 3385 1.667 - - 0.948 - - - - - 0.719
40. papss1 ENSDARG00000057099 809 1.659 - - - 0.752 - - - - 0.907 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-080721-5]
41. GPR17 ENSDARG00000062030 713 1.658 - - - - - - 0.791 - 0.867 G protein-coupled receptor 17 [Source:ZFIN;Acc:ZDB-GENE-100922-133]
42. sumo3b ENSDARG00000035993 3414 1.653 - - - - - - 0.780 - 0.873 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
43. ankzf1 ENSDARG00000041904 917 1.647 0.805 - - - - - - - 0.842 ankyrin repeat and zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-80]
44. kank2 ENSDARG00000018393 1804 1.646 - - - - - - - 0.773 0.873 KN motif and ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-040724-121]
45. kif5bb 1645 1.642 - 0.730 0.912 - - - - - - kinesin family member 5B, b
46. mex3b ENSDARG00000058369 1867 1.634 - - - - - - 0.711 - 0.923 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
47. C7H11orf68 C7H11orf68 446 1.633 - - - - - - 0.765 - 0.868
48. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.629 - - - - - - 0.718 - 0.911 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
49. ubl3b ENSDARG00000021556 1210 1.616 - - - - - - 0.741 - 0.875 ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
50. CCDC88C ENSDARG00000053713 1026 1.61 - - - - - - 0.742 - 0.868 coiled-coil domain containing 88C [Source:ZFIN;Acc:ZDB-GENE-100419-3]
51. gstm gstm 4064 1.609 - - 0.895 - - - 0.714 - -
52. pbxip1b ENSDARG00000011824 3726 1.607 - - 0.863 - - - - - 0.744 pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
53. slc6a6a ENSDARG00000012534 183 1.605 - - - - - - - 0.744 0.861 solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
54. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.605 - - - - - - 0.721 - 0.884 netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
55. cnot3b ENSDARG00000019842 838 1.601 - - - - - - - 0.735 0.866 CCR4-NOT transcription complex, subunit 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5838]
56. si:ch211-288g17.3 ENSDARG00000070959 2425 1.599 - - - - - - 0.772 - 0.827 si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
57. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 1.599 - - 0.776 - - - - - 0.823 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
58. cbx3a ENSDARG00000003860 4922 1.595 - - 0.877 - - - - - 0.718 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
59. mafg2 mafg2 1041 1.592 - 0.720 - - - - - - 0.872
60. vcp ENSDARG00000020008, ENSDARG00000116074 2284 1.587 - - 0.721 - - - - - 0.866 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
61. tspan5b ENSDARG00000070449 1056 1.582 - - - - - 0.714 - - 0.868 tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
62. ncoa6 ENSDARG00000071272 759 1.576 - - - - - - - 0.737 0.839 nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
63. pomp ENSDARG00000032296 4439 1.572 - - - - - - 0.788 - 0.784 proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
64. birc2 ENSDARG00000044619, ENSDARG00000117094 1376 1.57 0.715 - - - - - - - 0.855 baculoviral IAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-030825-6]
65. nova2 ENSDARG00000017673 7685 1.569 - - 0.793 - - - - - 0.776 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
66. si:dkey-10p5.10 ENSDARG00000099307 371 1.56 - - - - - - 0.702 - 0.858 si:dkey-10p5.10 [Source:ZFIN;Acc:ZDB-GENE-120215-130]
67. psmb7 ENSDARG00000037962 11542 1.554 - - 0.849 - - - 0.705 - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
68. CDIP1 ENSDARG00000076118 1294 1.548 - - - - - - 0.707 - 0.841 cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
69. plagx ENSDARG00000036855 3768 1.548 - - - - - - 0.701 - 0.847 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
70. si:dkeyp-113d7.10 ENSDARG00000092359 1585 1.545 - - - - - 0.784 0.761 - - si:dkeyp-113d7.10 [Source:ZFIN;Acc:ZDB-GENE-061207-80]
71. ap3m2 ENSDARG00000016128 851 1.543 - - - - - - 0.718 0.825 - adaptor related protein complex 3 subunit mu 2 [Source:ZFIN;Acc:ZDB-GENE-021022-2]
72. vdac1 ENSDARG00000045132 8051 1.543 - - 0.827 - - - - - 0.716 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
73. polr2i ENSDARG00000040443, ENSDARG00000110652 879 1.542 - - - - - 0.814 0.728 - - polymerase (RNA) II (DNA directed) polypeptide I [Source:ZFIN;Acc:ZDB-GENE-041010-106]
74. xrcc6bp1 662 1.541 - - - - - - - 0.727 0.814 XRCC6 binding protein 1
75. pus7 ENSDARG00000031774 195 1.538 - - - - - - - 0.712 0.826 pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
76. ppm1da ENSDARG00000009273 7713 1.537 - - - - - - - 0.714 0.823 protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
77. ncalda ENSDARG00000070688 5069 1.535 - 0.716 - - - - - - 0.819 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
78. asxl1 ENSDARG00000036956, ENSDARG00000115751 2955 1.531 - - - - - 0.725 - - 0.806 ASXL transcriptional regulator 1 [Source:ZFIN;Acc:ZDB-GENE-091116-9]
79. xpo1a ENSDARG00000078041 3544 1.522 - 0.765 - - - 0.757 - - - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
80. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 1.52 - - - - - 0.820 0.700 - - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
81. rnf44 ENSDARG00000068582 1612 1.51 - - - - - 0.736 - 0.774 - ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
82. C13H20orf194 C13H20orf194 580 1.507 - - - 0.730 - - 0.777 - -
83. PSIP1 PSIP1 5252 1.504 - - - - - - 0.705 - 0.799
84. surf6 ENSDARG00000035427 1695 1.503 - - - - - - 0.709 0.794 - surfeit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1333]
85. apc ENSDARG00000058868 2605 1.493 0.775 0.718 - - - - - - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
86. abcf1 ENSDARG00000031795 8635 1.49 - - - - - - 0.736 - 0.754 ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
87. aatkb ENSDARG00000104442 392 1.488 - - - - - - 0.733 0.755 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
88. SPAG5 SPAG5 1117 1.485 - - - - - 0.702 0.783 - -
89. usp4 ENSDARG00000014770 1684 1.482 - - - - - - 0.710 0.772 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
90. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.474 - - - - - - 0.730 - 0.744 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
91. pebp1 ENSDARG00000042069 6651 1.46 - - - - - - 0.701 - 0.759 phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
92. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.427 - - 0.715 - - - 0.712 - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
93. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 0.993 - - 0.993 - - - - - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
94. fignl1 ENSDARG00000016427 636 0.991 - - 0.991 - - - - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
95. lgi1a ENSDARG00000020493 1218 0.99 - - 0.990 - - - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
96. pou6f1 ENSDARG00000011570 1501 0.99 - - 0.990 - - - - - - POU class 6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-530]
97. setdb1a ENSDARG00000041243 1952 0.99 - - 0.990 - - - - - - SET domain, bifurcated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2421]
98. sema3fa ENSDARG00000011163 759 0.989 - - 0.989 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
99. dyrk1ab ENSDARG00000023814 1769 0.989 - - 0.989 - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
100. dtl ENSDARG00000023002 572 0.989 - - 0.989 - - - - - - denticleless E3 ubiquitin protein ligase homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020419-34]

There are 1248 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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