Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arhgef9b

Gene Name Gene ID Reads Annotation
arhgef9b ENSDARG00000078624, ENSDARG00000110276 595 Cdc42 guanine nucleotide exchange factor (GEF) 9b [Source:ZFIN;Acc:ZDB-GENE-030131-7745]










Genes with expression patterns similar to arhgef9b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgef9b ENSDARG00000078624, ENSDARG00000110276 595 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Cdc42 guanine nucleotide exchange factor (GEF) 9b [Source:ZFIN;Acc:ZDB-GENE-030131-7745]
2. sh3gl3b ENSDARG00000007302 573 1.547 - 0.786 - - - - 0.761 - - SH3-domain GRB2-like 3b [Source:ZFIN;Acc:ZDB-GENE-040121-4]
3. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.543 - - - - - 0.809 0.734 - - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
4. tmem127 ENSDARG00000030981 1389 1.522 - 0.773 - 0.749 - - - - - transmembrane protein 127 [Source:ZFIN;Acc:ZDB-GENE-050522-97]
5. ppp1r26 ENSDARG00000102891 486 1.521 0.757 - - 0.764 - - - - - protein phosphatase 1, regulatory subunit 26 [Source:ZFIN;Acc:ZDB-GENE-061103-607]
6. lpgat1 ENSDARG00000013542 762 1.498 - - - - - 0.702 0.796 - - lysophosphatidylglycerol acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2906]
7. nudt3a ENSDARG00000016256 2713 1.493 0.725 - - - - - 0.768 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
8. drg2 ENSDARG00000006642 1167 1.481 - - - - - 0.773 0.708 - - developmentally regulated GTP binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040808-29]
9. asb8 ENSDARG00000003383 733 1.458 0.707 - - - - - 0.751 - - ankyrin repeat and SOCS box containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5411]
10. synj2bp ENSDARG00000028321 1143 1.423 - 0.722 - - - - 0.701 - - synaptojanin 2 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6531]
11. akt2 ENSDARG00000011219 647 0.875 - 0.875 - - - - - - - v-akt murine thymoma viral oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-031007-5]
12. ccnl1b ENSDARG00000012140 1639 0.873 - 0.873 - - - - - - - cyclin L1b [Source:ZFIN;Acc:ZDB-GENE-030131-4813]
13. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 0.862 - - - - - - 0.862 - - solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
14. arntl1a ENSDARG00000006791 550 0.86 - - - - - - 0.860 - - aryl hydrocarbon receptor nuclear translocator-like 1a [Source:ZFIN;Acc:ZDB-GENE-000509-1]
15. lyrm1 ENSDARG00000026281 303 0.858 - - - - - - 0.858 - - LYR motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-210]
16. SCYL2 ENSDARG00000032627 683 0.853 - - - - - 0.853 - - - SCY1 like pseudokinase 2 [Source:HGNC Symbol;Acc:HGNC:19286]
17. tox3 ENSDARG00000073957 3075 0.851 - 0.851 - - - - - - - TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
18. icln icln 1279 0.848 - 0.848 - - - - - - -
19. rasa1a ENSDARG00000035535 2007 0.841 - 0.841 - - - - - - - RAS p21 protein activator (GTPase activating protein) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4694]
20. emc10 ENSDARG00000054793 2315 0.84 - - - - - - 0.840 - - ER membrane protein complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9045]
21. aida ENSDARG00000014532 1751 0.839 - 0.839 - - - - - - - axin interactor, dorsalization associated [Source:ZFIN;Acc:ZDB-GENE-071126-2]
22. rnf185 ENSDARG00000032997 1490 0.833 - 0.833 - - - - - - - ring finger protein 185 [Source:ZFIN;Acc:ZDB-GENE-040426-1977]
23. eya3 ENSDARG00000036100 1965 0.83 - - - - - - 0.830 - - EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
24. CDIP1 ENSDARG00000076118 1294 0.829 - - - - - - 0.829 - - cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
25. sema3fb ENSDARG00000055373 834 0.829 - - - - - - 0.829 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb [Source:ZFIN;Acc:ZDB-GENE-050513-2]
26. si:rp71-61h23.4 1921 0.826 - - - - - - 0.826 - - si:rp71-61h23.4
27. ndufa5 ENSDARG00000039346 2617 0.825 - - - - - - 0.825 - - NADH:ubiquinone oxidoreductase subunit A5 [Source:ZFIN;Acc:ZDB-GENE-050320-17]
28. rnf7 ENSDARG00000055524 3390 0.824 - - - - - - 0.824 - - ring finger protein 7 [Source:ZFIN;Acc:ZDB-GENE-050220-12]
29. cd2bp2 ENSDARG00000027357, ENSDARG00000115040, ENSDARG00000115297 1808 0.823 - - - - - 0.823 - - - CD2 (cytoplasmic tail) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-925]
30. AKAP2 AKAP2 4178 0.822 - - - - - - 0.822 - -
31. mkrn1 ENSDARG00000041665 578 0.821 - - - - - 0.821 - - - makorin, ring finger protein, 1 [Source:ZFIN;Acc:ZDB-GENE-020213-1]
32. med13a ENSDARG00000053884, ENSDARG00000112778 931 0.821 - - - - - - 0.821 - - mediator complex subunit 13a [Source:ZFIN;Acc:ZDB-GENE-070627-13]
33. pmepa1 ENSDARG00000039325 652 0.82 - 0.820 - - - - - - - prostate transmembrane protein, androgen induced 1 [Source:ZFIN;Acc:ZDB-GENE-040718-320]
34. erbb2ip 403 0.819 - 0.819 - - - - - - - erbb2 interacting protein, transcript variant X3
35. tyw5 ENSDARG00000069672, ENSDARG00000110022 255 0.819 - - - - - - 0.819 - - tRNA-yW synthesizing protein 5 [Source:ZFIN;Acc:ZDB-GENE-060929-894]
36. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 0.817 - - - - - - 0.817 - - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
37. CABZ01003826.1 CABZ01003826.1 486 0.817 - - - - - 0.817 - - -
38. mrpl38 ENSDARG00000039667 1145 0.817 - - - - - - 0.817 - - mitochondrial ribosomal protein L38 [Source:ZFIN;Acc:ZDB-GENE-040426-2373]
39. AL954697.2 AL954697.2 1809 0.816 - 0.816 - - - - - - -
40. PCDH12 ENSDARG00000076594 381 0.815 - - - - - - 0.815 - - protocadherin 12 [Source:ZFIN;Acc:ZDB-GENE-140106-126]
41. supt4h1 ENSDARG00000113969 1024 0.815 - 0.815 - - - - - - - SPT4 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-040718-214]
42. pcgf1 ENSDARG00000001249 409 0.812 - - - 0.812 - - - - - polycomb group ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030616-605]
43. MANBAL ENSDARG00000059853 636 0.812 - - - - - 0.812 - - - mannosidase beta like [Source:ZFIN;Acc:ZDB-GENE-161222-1]
44. mitfa ENSDARG00000003732 1288 0.812 - - - - - - 0.812 - - microphthalmia-associated transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990910-11]
45. anapc7 ENSDARG00000063005 1139 0.812 - - - - - - 0.812 - - anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
46. vash2 ENSDARG00000007774 2537 0.811 0.811 - - - - - - - - vasohibin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-355]
47. NUP54 ENSDARG00000103296 433 0.811 - - - - - 0.811 - - - nucleoporin 54 [Source:ZFIN;Acc:ZDB-GENE-040426-2263]
48. ZNF609 ZNF609 2176 0.81 0.810 - - - - - - - -
49. prkcz ENSDARG00000043332, ENSDARG00000114720 536 0.81 - - - - - 0.810 - - - protein kinase C, zeta [Source:ZFIN;Acc:ZDB-GENE-070511-1]
50. zgc:66014 817 0.809 - - - - - 0.809 - - - zgc:66014, transcript variant X6
51. dnph1 ENSDARG00000075730 403 0.809 - - - 0.809 - - - - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
52. srsf6a ENSDARG00000013729 8576 0.809 - - - - - - 0.809 - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
53. mbnl1 ENSDARG00000052978 1687 0.808 - - - - - - 0.808 - - muscleblind-like splicing regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060929-704]
54. znf319 znf319 3027 0.808 - - - - - 0.808 - - -
55. SERP1 ENSDARG00000076223 2528 0.804 - - - - - - 0.804 - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
56. CCNDBP1 ENSDARG00000039328 486 0.804 - - - - - - 0.804 - - cyclin D-type binding-protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-17]
57. RLIM ENSDARG00000079306 514 0.803 - - - - - - 0.803 - - ring finger protein, LIM domain interacting [Source:ZFIN;Acc:ZDB-GENE-120809-2]
58. hs2st1a ENSDARG00000099478 864 0.803 - - - - - - 0.803 - - heparan sulfate 2-O-sulfotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-070112-2312]
59. taf10 ENSDARG00000068641 3333 0.803 - - - - - - 0.803 - - TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
60. bcl7bb ENSDARG00000040396, ENSDARG00000116093 764 0.801 - - - - - - 0.801 - - BCL tumor suppressor 7Bb [Source:ZFIN;Acc:ZDB-GENE-010328-17]
61. iars2 ENSDARG00000044134 1990 0.801 - - - - - - 0.801 - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
62. RASSF3 ENSDARG00000059064 418 0.801 - 0.801 - - - - - - - Ras association (RalGDS/AF-6) domain family member 3 [Source:ZFIN;Acc:ZDB-GENE-100422-9]
63. AMPD2 AMPD2 1723 0.8 - - - - - - 0.800 - -
64. ankrd46a ENSDARG00000044328 482 0.799 - - - - - - 0.799 - - ankyrin repeat domain 46a [Source:ZFIN;Acc:ZDB-GENE-030131-2643]
65. dyrk1ab ENSDARG00000023814 1769 0.799 - - - - - 0.799 - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
66. COMMD6 ENSDARG00000074204 310 0.795 - 0.795 - - - - - - - COMM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-070912-209]
67. CR759921.2 CR759921.2 583 0.793 - - - - - 0.793 - - -
68. bre bre 1233 0.793 - 0.793 - - - - - - -
69. itga11a ENSDARG00000036086, ENSDARG00000111495 254 0.792 - - - - - - 0.792 - - integrin, alpha 11a [Source:ZFIN;Acc:ZDB-GENE-050324-1]
70. eif5b ENSDARG00000016548 3972 0.791 - - - - - - 0.791 - - eukaryotic translation initiation factor 5B [Source:ZFIN;Acc:ZDB-GENE-050208-20]
71. naa25 ENSDARG00000075446 1505 0.79 - 0.790 - - - - - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:ZFIN;Acc:ZDB-GENE-041111-190]
72. ppp6r3 ENSDARG00000013379 2912 0.789 - - - - - - 0.789 - - protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
73. ahcyl1 ENSDARG00000056331 1765 0.788 - 0.788 - - - - - - - adenosylhomocysteinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-021206-7]
74. cox6b2 ENSDARG00000037860 33134 0.787 - - - - - - 0.787 - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
75. taf1 ENSDARG00000035330 912 0.787 - - - - - - 0.787 - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
76. rab5ab ENSDARG00000007257 1402 0.786 - 0.786 - - - - - - - RAB5A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040122-3]
77. CEP85 ENSDARG00000060215 537 0.786 - 0.786 - - - - - - - centrosomal protein 85 [Source:ZFIN;Acc:ZDB-GENE-030131-1998]
78. NAPA NAPA 386 0.785 - - - - - 0.785 - - -
79. oxa1l ENSDARG00000069313, ENSDARG00000113799 1687 0.784 - - - - - - 0.784 - - oxidase (cytochrome c) assembly 1-like [Source:ZFIN;Acc:ZDB-GENE-071004-49]
80. ndufb11 ENSDARG00000043467 7495 0.784 - - - - - - 0.784 - - NADH:ubiquinone oxidoreductase subunit B11 [Source:ZFIN;Acc:ZDB-GENE-050309-25]
81. ASXL2 ENSDARG00000076501 378 0.784 - - - 0.784 - - - - - ASXL transcriptional regulator 2 [Source:ZFIN;Acc:ZDB-GENE-100412-1]
82. hm13 ENSDARG00000037846 5019 0.783 - - - - - - 0.783 - - histocompatibility (minor) 13 [Source:ZFIN;Acc:ZDB-GENE-020802-3]
83. ssfa2 340 0.783 - - - - - 0.783 - - - sperm specific antigen 2, transcript variant X2
84. ccdc93 ENSDARG00000040678 1131 0.782 - - - - - - 0.782 - - coiled-coil domain containing 93 [Source:ZFIN;Acc:ZDB-GENE-060421-8315]
85. atp7a ENSDARG00000003699 476 0.781 - 0.781 - - - - - - - ATPase copper transporting alpha [Source:ZFIN;Acc:ZDB-GENE-060825-45]
86. CR383676.3 CR383676.3 2650 0.781 - - - - - - 0.781 - -
87. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 0.781 - - - 0.781 - - - - - si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
88. rbl2 ENSDARG00000045636 658 0.78 - - - - - - 0.780 - - retinoblastoma-like 2 (p130) [Source:ZFIN;Acc:ZDB-GENE-061109-2]
89. uri1 ENSDARG00000026664 1474 0.78 - - - - - - 0.780 - - URI1, prefoldin-like chaperone [Source:ZFIN;Acc:ZDB-GENE-050913-30]
90. pgp ENSDARG00000029695, ENSDARG00000114512 829 0.779 - - - - - - 0.779 - - phosphoglycolate phosphatase [Source:ZFIN;Acc:ZDB-GENE-030131-6240]
91. RAC1 RAC1 2008 0.778 0.778 - - - - - - - -
92. SLC17A7 SLC17A7 1226 0.778 0.778 - - - - - - - -
93. si:ch211-174j14.2 ENSDARG00000093015 111 0.778 - - - 0.778 - - - - - si:ch211-174j14.2 [Source:ZFIN;Acc:ZDB-GENE-050419-63]
94. tsen34 ENSDARG00000061370, ENSDARG00000115749 814 0.778 - 0.778 - - - - - - - TSEN34 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050419-115]
95. si:dkey-28b4.8 ENSDARG00000002840 1277 0.776 - 0.776 - - - - - - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
96. chaf1b ENSDARG00000056473 880 0.776 - - - - - - 0.776 - - chromatin assembly factor 1, subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1947]
97. si:ch211-195b13.1 ENSDARG00000016623 427 0.775 - - - - - - 0.775 - - si:ch211-195b13.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7626]
98. irs1 ENSDARG00000054087 1809 0.774 - - - 0.774 - - - - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
99. tufm ENSDARG00000104173 9292 0.773 - - - - - - 0.773 - - Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
100. CR361561.3 CR361561.3 91 0.773 - - - 0.773 - - - - -

There are 357 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA