Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for arhgef9a

Gene Name Gene ID Reads Annotation
arhgef9a ENSDARG00000061746 58 Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]










Genes with expression patterns similar to arhgef9a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgef9a ENSDARG00000061746 58 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
2. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 2.584 - 1.000 - - - - 0.835 0.749 - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
3. BX470131.1 BX470131.1 86 2 - 1.000 - - - - 1.000 - -
4. si:ch211-214j24.15 ENSDARG00000063481 8 1.967 - 1.000 - - 0.967 - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
5. LMTK3 LMTK3 222 1.947 - 1.000 - - - - 0.947 - -
6. lhx5 ENSDARG00000057936 785 1.947 - 1.000 - - - - 0.947 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
7. cacng2a ENSDARG00000032565 99 1.936 - 1.000 - - - - 0.936 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
8. pcbp3 ENSDARG00000054378 74 1.933 - 1.000 - - - - 0.933 - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
9. erap2 ENSDARG00000098618 16 1.931 - 1.000 - - - - 0.931 - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
10. fez1 ENSDARG00000023174 701 1.926 - 1.000 - - - - 0.926 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
11. pdzd4 175 1.921 - 1.000 - - - - 0.921 - - PDZ domain containing 4, transcript variant X2
12. TMEM57 TMEM57 260 1.921 - 1.000 - - - - 0.921 - -
13. DOCK4 DOCK4 78 1.918 - 1.000 - - - - 0.918 - -
14. st6gal1 ENSDARG00000044514 142 1.901 - 1.000 - - - - 0.901 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
15. scg2b ENSDARG00000038574 345 1.879 - 1.000 - - - - 0.879 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
16. bhlhe22 ENSDARG00000058039 1673 1.874 - 0.954 - - - - 0.920 - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
17. ROBO3_1 ROBO3_1 468 1.868 - 0.893 - - - - 0.975 - -
18. lhfpl4a ENSDARG00000111810 206 1.851 - 0.875 - - - - 0.976 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
19. zgc:153615 ENSDARG00000038981 105 1.833 - 1.000 - - - - 0.833 - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
20. plscr3a ENSDARG00000093078 7 1.828 - 1.000 - - - - 0.828 - - phospholipid scramblase 3a [Source:ZFIN;Acc:ZDB-GENE-060531-17]
21. si:dkey-193c22.1 ENSDARG00000093687 104 1.828 - 1.000 - - - - 0.828 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
22. SMARCA4 ENSDARG00000104339 48 1.828 - 1.000 - - - - 0.828 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
23. rassf4 ENSDARG00000012460 43 1.828 - 1.000 - - - - 0.828 - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
24. cdk5r1a ENSDARG00000037916 46 1.828 - 1.000 - - - - 0.828 - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
25. cldnd ENSDARG00000006580 17 1.828 - 1.000 - - - - 0.828 - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
26. aatkb ENSDARG00000104442 392 1.819 - 1.000 - - - - 0.819 - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
27. LINGO2 LINGO2 300 1.815 - 0.880 - - - - 0.935 - -
28. si:ch211-207c6.4 si:ch211-207c6.4 7 1.801 - - - - 0.967 0.834 - - -
29. CABZ01021538.1 CABZ01021538.1 67 1.8 - 1.000 - - - - 0.800 - -
30. adcyap1a ENSDARG00000004015 67 1.795 - - - - 0.967 - 0.828 - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
31. grm1a ENSDARG00000026796 9 1.795 - - - - 0.967 - 0.828 - - glutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
32. si:dkey-20d21.12 ENSDARG00000092123 38 1.787 - 1.000 - - - 0.787 - - - si:dkey-20d21.12 [Source:ZFIN;Acc:ZDB-GENE-081104-365]
33. nmrk1 ENSDARG00000037913 18 1.787 - 1.000 - - - 0.787 - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
34. mb21d2a mb21d2a 421 1.783 - 0.835 - - - - 0.948 - -
35. fam43b ENSDARG00000070222 92 1.777 - 1.000 - - - - 0.777 - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
36. si:dkey-71b5.6 ENSDARG00000098861 12 1.774 - 1.000 - - - 0.774 - - - si:dkey-71b5.6 [Source:NCBI gene;Acc:100294632]
37. cacng8b ENSDARG00000070626 176 1.766 - 0.794 - - - - 0.972 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
38. nhlh2 ENSDARG00000025495 1860 1.764 - 0.829 - - - - 0.935 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
39. KIF2A_1 ENSDARG00000043571 189 1.759 - 1.000 - - - - 0.759 - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
40. LRFN4 LRFN4 59 1.747 - 1.000 - - - - - 0.747 -
41. SLC5A7 SLC5A7 453 1.741 0.776 - - - - - 0.965 - -
42. gad1b ENSDARG00000027419 440 1.736 - 1.000 - - - - 0.736 - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
43. elavl4 ENSDARG00000045639 998 1.735 - 0.794 - - - - 0.941 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
44. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.729 - 0.880 - - - - 0.849 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
45. galr1 galr1 9 1.727 - 1.000 - - - - 0.727 - -
46. U1_25 U1_25 283 1.721 0.766 - - - - 0.955 - - -
47. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1.71 - 1.000 - - - - 0.710 - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
48. CABZ01061873.1 CABZ01061873.1 51 1.71 - 0.880 - - - - 0.830 - -
49. pigf ENSDARG00000032780 7 1.708 - 0.880 - - - - 0.828 - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
50. si:ch73-173m3.3 si:ch73-173m3.3 425 1.685 0.813 0.872 - - - - - - -
51. glrba ENSDARG00000052782, ENSDARG00000117018 4 1.684 - 0.880 - - - - 0.804 - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
52. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.678 0.808 - - - - - 0.870 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
53. mir10d-1 mir10d-1 860 1.677 - - - - - - 0.942 0.735 -
54. kif5c ENSDARG00000076027 424 1.675 0.852 - - - - - 0.823 - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
55. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.674 0.781 - - - - - 0.893 - - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
56. CNTNAP5 CNTNAP5 20 1.673 - - - - 0.839 0.834 - - -
57. sox19b ENSDARG00000040266 532 1.659 - 0.728 - - - - 0.931 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
58. TRIM14_8 TRIM14_8 5 1.657 - - - - 0.870 0.787 - - -
59. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.655 - 0.826 - - - - 0.829 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
60. b3galnt2 ENSDARG00000046133 68 1.651 - 0.847 - - - - 0.804 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
61. st18 663 1.65 0.767 - - - - - 0.883 - - suppression of tumorigenicity 18, zinc finger
62. rims2b ENSDARG00000102690 275 1.648 - 0.875 - - - - 0.773 - - regulating synaptic membrane exocytosis 2b [Source:ZFIN;Acc:ZDB-GENE-060503-893]
63. si:ch211-137i24.12 ENSDARG00000094537 35 1.643 - 0.710 - - - - 0.933 - - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
64. sc:d217 ENSDARG00000079645 32 1.641 0.766 0.875 - - - - - - - sc:d217 [Source:ZFIN;Acc:ZDB-GENE-080303-15]
65. ADAMTS3 ENSDARG00000060127 2839 1.632 0.785 - - - - - 0.847 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
66. hnrnpa3 ENSDARG00000059351 453 1.632 0.746 - - - - - 0.886 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
67. chst3a ENSDARG00000061070 127 1.629 - 0.721 - - - - 0.908 - - carbohydrate (chondroitin 6) sulfotransferase 3a [Source:ZFIN;Acc:ZDB-GENE-090312-180]
68. pou3f2a ENSDARG00000070220 817 1.625 0.709 - - - - - 0.916 - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
69. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.622 0.725 - - - - - 0.897 - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
70. insm1a ENSDARG00000091756 1838 1.62 0.771 - - - - - 0.849 - - insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
71. styxl1 ENSDARG00000026338 29 1.615 - - - - - 0.787 0.828 - - serine/threonine/tyrosine interacting-like 1 [Source:ZFIN;Acc:ZDB-GENE-040912-45]
72. l3mbtl1a ENSDARG00000014828 119 1.615 - - - - - 0.787 0.828 - - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
73. ek1 ENSDARG00000020080 742 1.614 0.740 - - - - - 0.874 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
74. gad2 ENSDARG00000015537 724 1.613 0.859 - - - - - 0.754 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
75. slc35g2b ENSDARG00000045447 378 1.608 - 0.711 - - - - 0.897 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
76. si:ch73-265d7.2 ENSDARG00000116713 2142 1.604 0.775 - - - - - 0.829 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
77. nkx6.1 ENSDARG00000022569 3779 1.599 0.768 - - - - - 0.831 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
78. BX649458.1 BX649458.1 166 1.59 - 0.783 - - - - 0.807 - -
79. trim35-36 trim35-36 19 1.589 - - - - 0.755 0.834 - - -
80. sprn ENSDARG00000056004 128 1.581 0.837 - - - - - 0.744 - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
81. si:ch211-141o9.10 ENSDARG00000077900 98 1.581 - 0.844 - - - 0.737 - - - si:ch211-141o9.10 [Source:ZFIN;Acc:ZDB-GENE-130603-5]
82. mnx2a ENSDARG00000042106 939 1.58 0.796 - - - - - 0.784 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
83. relnl relnl 863 1.58 - 0.805 - - - - 0.775 - -
84. ENSDARG00000096553 ENSDARG00000096553 388 1.578 - - - - - 0.818 0.760 - -
85. her13 ENSDARG00000007097 2000 1.573 - 0.729 - - - - 0.844 - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
86. sult1st5 ENSDARG00000003475, ENSDARG00000111502 34 1.571 - - - - 0.820 - - 0.751 - sulfotransferase family 1, cytosolic sulfotransferase 5 [Source:ZFIN;Acc:ZDB-GENE-050809-2]
87. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.544 - 0.728 - - - - 0.816 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
88. PRIMA1 PRIMA1 459 1.54 0.774 - - - - - 0.766 - -
89. scd ENSDARG00000033662 146 1.534 - - - - 0.706 - 0.828 - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
90. olig2 ENSDARG00000040946 1405 1.533 0.728 - - - - - 0.805 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
91. hectd2 ENSDARG00000061194 559 1.532 0.702 - - - - - 0.830 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
92. cdx4 ENSDARG00000036292 1225 1.526 - - - - - 0.797 - 0.729 - caudal type homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-980526-330]
93. BAIAP2 BAIAP2 88 1.525 0.752 - - - - - 0.773 - -
94. pkd1b ENSDARG00000033029 461 1.525 0.778 - - - - - 0.747 - - polycystic kidney disease 1b [Source:ZFIN;Acc:ZDB-GENE-100707-2]
95. ret ENSDARG00000055305 700 1.52 - - - - - 0.702 0.818 - - ret proto-oncogene receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-980526-307]
96. PPP1R9B PPP1R9B 855 1.51 0.742 - - - - - 0.768 - -
97. irx5b ENSDARG00000074070 459 1.51 - 0.726 - - - - 0.784 - - iroquois homeobox 5b [Source:ZFIN;Acc:ZDB-GENE-040628-5]
98. shisa7 shisa7 181 1.493 - 0.756 - - - - 0.737 - -
99. eef1a1a ENSDARG00000039502 234 1.486 0.752 - - - - - 0.734 - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
100. JAKMIP1 ENSDARG00000076090 55 1.47 - - - - - - 0.763 0.707 - janus kinase and microtubule interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-110208-7]

There are 1867 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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