Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for arhgef39

Gene Name Gene ID Reads Annotation
arhgef39 ENSDARG00000013476, ENSDARG00000114412 632 Rho guanine nucleotide exchange factor (GEF) 39 [Source:ZFIN;Acc:ZDB-GENE-041114-28]










Genes with expression patterns similar to arhgef39

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgef39 ENSDARG00000013476, ENSDARG00000114412 632 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rho guanine nucleotide exchange factor (GEF) 39 [Source:ZFIN;Acc:ZDB-GENE-041114-28]
2. LRIF1_1 LRIF1_1 228 1.692 - 0.851 - - - - - 0.841 -
3. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 1.66 - 0.850 - - - - - 0.810 - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
4. clpxa ENSDARG00000029063 1188 1.654 - 0.898 - - - - - 0.756 - caseinolytic mitochondrial matrix peptidase chaperone subunit a [Source:ZFIN;Acc:ZDB-GENE-040912-143]
5. COL4A3BP COL4A3BP 3288 1.623 - 0.825 - - - - 0.798 - -
6. ints8 ENSDARG00000057986 1063 1.61 - 0.799 - - - - - 0.811 - integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
7. mgll ENSDARG00000036820 747 1.602 - 0.858 - - - - - 0.744 - monoglyceride lipase [Source:ZFIN;Acc:ZDB-GENE-031006-9]
8. naf1 ENSDARG00000057929, ENSDARG00000110711 426 1.596 - - - - - - 0.775 0.821 - nuclear assembly factor 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4546]
9. FP236276.2 FP236276.2 43 1.594 - 0.853 - - - - 0.741 - -
10. Sep-07 Sep-07 1827 1.591 - 0.859 0.732 - - - - - -
11. BX005008.2 BX005008.2 708 1.58 - 0.756 - 0.824 - - - - -
12. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.557 - 0.852 - - - - 0.705 - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
13. socs8 socs8 128 1.556 - - 0.804 - - - 0.752 - -
14. pygl ENSDARG00000002197 192 1.555 - - 0.842 - - - 0.713 - - phosphorylase, glycogen, liver [Source:ZFIN;Acc:ZDB-GENE-041205-1]
15. aggf1 ENSDARG00000060109 574 1.54 - 0.789 - - - - - 0.751 - angiogenic factor with G patch and FHA domains 1 [Source:ZFIN;Acc:ZDB-GENE-060929-836]
16. si:ch211-117m20.5 ENSDARG00000091996 7246 1.536 - 0.773 - - - - - 0.763 - si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
17. rnf11a ENSDARG00000010442 592 1.53 - - 0.811 - - - 0.719 - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
18. zgc:110239 ENSDARG00000077664 7015 1.522 - 0.801 - - - - 0.721 - - zgc:110239 [Source:ZFIN;Acc:ZDB-GENE-050417-107]
19. mak16 ENSDARG00000003527 519 1.501 - - - - - - 0.750 0.751 - MAK16 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020419-35]
20. pdgfra_1 ENSDARG00000070494, ENSDARG00000113952 1996 1.464 - 0.741 - - - - 0.723 - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
21. gb:bc139653 gb:bc139653 239 0.982 - 0.982 - - - - - - -
22. b4galt1 ENSDARG00000002634 1076 0.96 - 0.960 - - - - - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050417-236]
23. slc50a1 ENSDARG00000015158 329 0.958 - 0.958 - - - - - - - solute carrier family 50 (sugar efflux transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-050220-11]
24. mia2 ENSDARG00000099973 139 0.945 - 0.945 - - - - - - - MIA SH3 domain ER export factor 2 [Source:ZFIN;Acc:ZDB-GENE-100618-1]
25. c1galt1b ENSDARG00000055561, ENSDARG00000113870 1795 0.941 - 0.941 - - - - - - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9075]
26. lamb4 ENSDARG00000039133 1220 0.939 - 0.939 - - - - - - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
27. pvrl1b 1645 0.932 - 0.932 - - - - - - - poliovirus receptor-related 1b
28. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 0.931 - 0.931 - - - - - - - ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
29. st6galnac4 ENSDARG00000100804 583 0.93 - 0.930 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-060322-6]
30. ppp1r13l ENSDARG00000013777 2260 0.927 - 0.927 - - - - - - - protein phosphatase 1, regulatory subunit 13 like [Source:ZFIN;Acc:ZDB-GENE-050327-33]
31. lipf ENSDARG00000018529 1849 0.925 - 0.925 - - - - - - - lipase, gastric [Source:ZFIN;Acc:ZDB-GENE-040426-2737]
32. tab1 ENSDARG00000036613 445 0.924 - 0.924 - - - - - - - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
33. mpv17l2 ENSDARG00000056367, ENSDARG00000112107 352 0.924 - 0.924 - - - - - - - MPV17 mitochondrial membrane protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-306]
34. zgc:113054 ENSDARG00000053483 1079 0.923 - 0.923 - - - - - - - zgc:113054 [Source:ZFIN;Acc:ZDB-GENE-050320-9]
35. tjp2b ENSDARG00000023443 1654 0.921 - 0.921 - - - - - - - tight junction protein 2b (zona occludens 2) [Source:ZFIN;Acc:ZDB-GENE-040718-58]
36. laptm4a ENSDARG00000006397 1698 0.92 - 0.920 - - - - - - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
37. dlgap4a ENSDARG00000060849 1813 0.918 - 0.918 - - - - - - - discs, large (Drosophila) homolog-associated protein 4a [Source:ZFIN;Acc:ZDB-GENE-080219-51]
38. FBXO33 ENSDARG00000075400 1164 0.917 - 0.917 - - - - - - - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
39. srpx ENSDARG00000010318 946 0.916 - 0.916 - - - - - - - sushi-repeat containing protein X-linked [Source:ZFIN;Acc:ZDB-GENE-050327-43]
40. CPAMD8 ENSDARG00000056530 3481 0.916 - 0.916 - - - - - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
41. ZFP36 ZFP36 1677 0.913 - 0.913 - - - - - - -
42. si:dkey-58f10.7 ENSDARG00000091972, ENSDARG00000093350 152 0.909 - 0.909 - - - - - - - si:dkey-58f10.7 [Source:ZFIN;Acc:ZDB-GENE-060526-321]
43. si:ch211-208h7.4 si:ch211-208h7.4 1334 0.909 - 0.909 - - - - - - -
44. HGSNAT ENSDARG00000077804 1540 0.906 - - - - - - 0.906 - - heparan-alpha-glucosaminide N-acetyltransferase [Source:ZFIN;Acc:ZDB-GENE-140106-144]
45. fam199x ENSDARG00000009982 967 0.905 - 0.905 - - - - - - - family with sequence similarity 199, X-linked [Source:ZFIN;Acc:ZDB-GENE-040808-24]
46. SLC16A13 ENSDARG00000055342 183 0.904 - 0.904 - - - - - - - solute carrier family 16, member 13 (monocarboxylic acid transporter 13) [Source:ZFIN;Acc:ZDB-GENE-120907-2]
47. nudt6 ENSDARG00000103523 64 0.9 - - 0.900 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 6 [Source:ZFIN;Acc:ZDB-GENE-070410-44]
48. myo5b ENSDARG00000062003 653 0.898 - 0.898 - - - - - - - myosin VB [Source:ZFIN;Acc:ZDB-GENE-031219-7]
49. TRPC4 TRPC4 18 0.896 - - 0.896 - - - - - -
50. mir457b 21 0.896 - - 0.896 - - - - - - microRNA 457b
51. arl15b ENSDARG00000057995, ENSDARG00000109775 1243 0.895 - - - - - - - 0.895 - ADP-ribosylation factor-like 15b [Source:ZFIN;Acc:ZDB-GENE-080813-2]
52. znf362 znf362 869 0.895 - 0.895 - - - - - - -
53. numb ENSDARG00000027279 2905 0.895 - - - - - - 0.895 - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
54. nmrk1 ENSDARG00000037913 18 0.894 - - 0.894 - - - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
55. LAMB3 LAMB3 31 0.893 - - 0.893 - - - - - -
56. ankrd1b ENSDARG00000076192 204 0.893 - - 0.893 - - - - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
57. vdac1 ENSDARG00000045132 8051 0.893 - 0.893 - - - - - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
58. CU694319.1 CU694319.1 72 0.893 - - 0.893 - - - - - -
59. CPNE8 ENSDARG00000025189 11 0.893 - - 0.893 - - - - - - copine VIII [Source:ZFIN;Acc:ZDB-GENE-100809-1]
60. zgc:158464 ENSDARG00000100342 18 0.893 - - 0.893 - - - - - - zgc:158464 [Source:ZFIN;Acc:ZDB-GENE-070112-432]
61. LPXN ENSDARG00000079315 12 0.893 - - 0.893 - - - - - - leupaxin [Source:ZFIN;Acc:ZDB-GENE-081105-159]
62. si:dkey-94e7.2 ENSDARG00000068474 14 0.893 - - 0.893 - - - - - - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
63. mpi ENSDARG00000030786 3052 0.892 - 0.892 - - - - - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
64. TXNRD2 TXNRD2 14 0.892 - - 0.892 - - - - - -
65. zgc:91849 ENSDARG00000104716 237 0.891 - - 0.891 - - - - - - zgc:91849 [Source:ZFIN;Acc:ZDB-GENE-040718-438]
66. ncapg ENSDARG00000070109, ENSDARG00000109474, ENSDARG00000113314, ENSDARG00000113623 2338 0.891 - 0.891 - - - - - - - non-SMC condensin I complex, subunit G [Source:ZFIN;Acc:ZDB-GENE-041111-282]
67. SLC47A1_1 SLC47A1_1 130 0.891 - 0.891 - - - - - - -
68. si:dkey-199m13.2 si:dkey-199m13.2 31 0.888 - - 0.888 - - - - - -
69. optn ENSDARG00000002663, ENSDARG00000111364 1440 0.888 - 0.888 - - - - - - - optineurin [Source:ZFIN;Acc:ZDB-GENE-030131-8103]
70. c8g ENSDARG00000032098 1368 0.886 - 0.886 - - - - - - - complement component 8, gamma polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-1898]
71. slc27a4 ENSDARG00000017047, ENSDARG00000113602 811 0.886 - 0.886 - - - - - - - solute carrier family 27 (fatty acid transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050417-248]
72. tmem63a ENSDARG00000031956 112 0.885 - - 0.885 - - - - - - transmembrane protein 63A [Source:ZFIN;Acc:ZDB-GENE-041210-107]
73. bub1bb ENSDARG00000074927 1667 0.882 - 0.882 - - - - - - - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
74. BX569778.1 BX569778.1 36 0.882 - 0.882 - - - - - - -
75. rac2 ENSDARG00000038010 5837 0.882 - 0.882 - - - - - - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
76. KCTD14 ENSDARG00000110240 122 0.881 - 0.881 - - - - - - - potassium channel tetramerization domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-239]
77. rnf145b ENSDARG00000032373 601 0.881 - - 0.881 - - - - - - ring finger protein 145b [Source:ZFIN;Acc:ZDB-GENE-030131-5264]
78. si:dkey-202n8.1 si:dkey-202n8.1 35 0.879 - - 0.879 - - - - - -
79. b2ml ENSDARG00000015887 1060 0.879 - 0.879 - - - - - - - beta-2-microglobulin, like [Source:ZFIN;Acc:ZDB-GENE-040426-2136]
80. lmna ENSDARG00000013415 1562 0.878 - 0.878 - - - - - - - lamin A [Source:ZFIN;Acc:ZDB-GENE-020424-3]
81. ankrd50l ENSDARG00000007077 1115 0.878 - 0.878 - - - - - - - ankyrin repeat domain 50-like [Source:ZFIN;Acc:ZDB-GENE-041008-117]
82. GPA33 2465 0.878 - 0.878 - - - - - - - glycoprotein A33 (transmembrane)
83. myof ENSDARG00000006112 618 0.878 - 0.878 - - - - - - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
84. wu:fe11b02 wu:fe11b02 9 0.877 - - 0.877 - - - - - -
85. C5H9orf16 C5H9orf16 743 0.876 - 0.876 - - - - - - -
86. pitpnaa ENSDARG00000039490 1096 0.875 - 0.875 - - - - - - - phosphatidylinositol transfer protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-744]
87. mea1 ENSDARG00000039820 589 0.874 - - 0.874 - - - - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
88. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 0.874 - 0.874 - - - - - - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
89. si:ch73-138e16.5 ENSDARG00000040141 8 0.874 - - 0.874 - - - - - - si:ch73-138e16.5 [Source:ZFIN;Acc:ZDB-GENE-070705-204]
90. SLC2A4RG SLC2A4RG 47 0.874 - - 0.874 - - - - - -
91. zgc:112038 ENSDARG00000046140 73 0.873 - - 0.873 - - - - - - zgc:112038 [Source:ZFIN;Acc:ZDB-GENE-050522-271]
92. pnpla7a ENSDARG00000062986 1793 0.873 - 0.873 - - - - - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
93. TP53BP1 ENSDARG00000079000 997 0.873 - 0.873 - - - - - - - tumor protein p53 binding protein, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3695]
94. VMO1 VMO1 11 0.872 - - 0.872 - - - - - -
95. mhc1uba ENSDARG00000075963 31 0.871 - - 0.871 - - - - - - major histocompatibility complex class I UBA [Source:ZFIN;Acc:ZDB-GENE-990415-145]
96. rfc3 ENSDARG00000055969, ENSDARG00000112402 1448 0.871 - 0.871 - - - - - - - replication factor C (activator 1) 3 [Source:ZFIN;Acc:ZDB-GENE-020809-3]
97. zdhhc6 ENSDARG00000075721 1494 0.87 - 0.870 - - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
98. CABZ01075275.1 CABZ01075275.1 124 0.87 - - - - - - - 0.870 -
99. mtfr2 ENSDARG00000060394 482 0.869 - 0.869 - - - - - - - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
100. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 0.869 - 0.869 - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]

There are 1087 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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