Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for arhgef3

Gene Name Gene ID Reads Annotation
arhgef3 ENSDARG00000013834 3 Rho guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-050208-773]










Genes with expression patterns similar to arhgef3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgef3 ENSDARG00000013834 3 3 1.000 1.000 - - 1.000 - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-050208-773]
2. ltk ENSDARG00000042861, ENSDARG00000116109 76 2 1.000 1.000 - - - - - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
3. l3mbtl3 ENSDARG00000025983 12 2 1.000 1.000 - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
4. RGS9BP ENSDARG00000086756 65 2 1.000 1.000 - - - - - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
5. rs1 rs1 70 2 1.000 1.000 - - - - - - -
6. ME1 ENSDARG00000053215 8 1.989 - 1.000 - - 0.989 - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
7. gdf10a ENSDARG00000095378 12 1.987 - 1.000 - - 0.987 - - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
8. esr2b ENSDARG00000034181 20 1.976 1.000 - - - 0.976 - - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
9. sprn ENSDARG00000056004 128 1.895 0.895 1.000 - - - - - - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
10. si:ch211-255a21.4 si:ch211-255a21.4 26 1.883 - 1.000 - - 0.883 - - - -
11. lpar6b ENSDARG00000069441 65 1.819 1.000 0.819 - - - - - - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
12. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.728 0.728 1.000 - - - - - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
13. CABZ01038313.1 CABZ01038313.1 79 1.713 - 1.000 - - 0.713 - - - -
14. nipbla ENSDARG00000098272 26 1.711 1.000 0.711 - - - - - - - nipped-B homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060526-121]
15. bicc2 ENSDARG00000076557 77 1.663 0.959 0.704 - - - - - - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
16. COL27A1 COL27A1 94 1.52 0.712 0.808 - - - - - - -
17. nudt18 ENSDARG00000041576 61 1.437 0.724 0.713 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:ZFIN;Acc:ZDB-GENE-050417-388]
18. BAI1_1 BAI1_1 57 1.42 - 0.704 - - 0.716 - - - -
19. tgfa ENSDARG00000053939 1 1 1.000 - - - - - - - - transforming growth factor, alpha [Source:ZFIN;Acc:ZDB-GENE-040724-208]
20. CU928854.1 CU928854.1 3 1 - 1.000 - - - - - - -
21. SSBP2 ENSDARG00000099727 22 1 - 1.000 - - - - - - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
22. crfb13 crfb13 2 1 1.000 - - - - - - - -
23. zgc:158654 19 1 1.000 - - - - - - - - zgc:158654, transcript variant X1
24. zgc:77112 ENSDARG00000015657 24 1 - 1.000 - - - - - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
25. ONECUT3 ONECUT3 2 1 1.000 - - - - - - - -
26. lzts1 ENSDARG00000075565 23 1 - 1.000 - - - - - - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
27. si:dkey-287f10.2 si:dkey-287f10.2 3 1 - 1.000 - - - - - - -
28. si:dkey-3h3.3 ENSDARG00000067718 225 1 1.000 - - - - - - - - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
29. CMA1_11 CMA1_11 0 1 - 1.000 - - - - - - -
30. vwc2 ENSDARG00000076495 22 1 - 1.000 - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
31. igsf21b ENSDARG00000056084 6 1 - 1.000 - - - - - - - immunoglobin superfamily, member 21b [Source:ZFIN;Acc:ZDB-GENE-070424-59]
32. hcrt ENSDARG00000070932 4 1 1.000 - - - - - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
33. si:dkey-11c5.14 si:dkey-11c5.14 15 1 - 1.000 - - - - - - -
34. rdh14a ENSDARG00000039299 79 1 1.000 - - - - - - - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
35. mmp23bb ENSDARG00000009825 133 1 1.000 - - - - - - - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
36. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1 - 1.000 - - - - - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
37. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 1 - 1.000 - - - - - - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
38. slc2a15b ENSDARG00000053269 899 1 - 1.000 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
39. si:ch73-290k24.5 ENSDARG00000076310 39 1 - 1.000 - - - - - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
40. CU469509.3 CU469509.3 1 1 1.000 - - - - - - - -
41. adora1 adora1 149 1 - 1.000 - - - - - - -
42. BX548021.2 BX548021.2 4 1 - 1.000 - - - - - - -
43. si:dkey-191j3.2 ENSDARG00000101997 1 1 - 1.000 - - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
44. fank1 ENSDARG00000039657 9 1 1.000 - - - - - - - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
45. BX649497.1 BX649497.1 0 1 - 1.000 - - - - - - -
46. si:ch211-10j20.7 si:ch211-10j20.7 8 1 - 1.000 - - - - - - -
47. CABZ01065506.1 CABZ01065506.1 204 1 - 1.000 - - - - - - -
48. galnt13 ENSDARG00000099227 1059 1 - 1.000 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
49. thada ENSDARG00000053082, ENSDARG00000112761 2 1 - 1.000 - - - - - - - thyroid adenoma associated [Source:ZFIN;Acc:ZDB-GENE-050320-49]
50. si:ch73-27e22.7 ENSDARG00000093345 2 1 - 1.000 - - - - - - - si:ch73-27e22.7 [Source:ZFIN;Acc:ZDB-GENE-070705-235]
51. zgc:194665 ENSDARG00000004577 136 1 - 1.000 - - - - - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
52. BX000430.1 ENSDARG00000112057 135 1 - 1.000 - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
53. si:ch211-57f7.7 ENSDARG00000093131 8 1 - 1.000 - - - - - - - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
54. BX649415.4 BX649415.4 3 1 - 1.000 - - - - - - -
55. BX649498.2 BX649498.2 40 1 1.000 - - - - - - - -
56. lars2 ENSDARG00000075337 31 1 1.000 - - - - - - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
57. si:dkey-161j23.5 ENSDARG00000094441 11 1 1.000 - - - - - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
58. c3c c3c 174 1 - 1.000 - - - - - - -
59. tyro3 ENSDARG00000005356 4 1 - 1.000 - - - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
60. ARMC6 ENSDARG00000103770 39 1 1.000 - - - - - - - - armadillo repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:25049]
61. fbxo16 ENSDARG00000033949 35 1 1.000 - - - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
62. CABZ01066439.2 CABZ01066439.2 5 1 1.000 - - - - - - - -
63. si:ch211-214p13.3 ENSDARG00000087403 0 1 - 1.000 - - - - - - - si:ch211-214p13.3 [Source:ZFIN;Acc:ZDB-GENE-060503-779]
64. si:ch211-213i16.4 8 1 - 1.000 - - - - - - - si:ch211-213i16.4, transcript variant X1
65. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1 - 1.000 - - - - - - - activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
66. NRSN2 NRSN2 57 1 - 1.000 - - - - - - -
67. zgc:195633 19 1 - 1.000 - - - - - - - zgc:195633
68. RBM11 ENSDARG00000090202 15 1 1.000 - - - - - - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
69. dnah1 ENSDARG00000100115 17 1 - 1.000 - - - - - - - dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
70. si:ch73-91k6.8 si:ch73-91k6.8 37 1 - 1.000 - - - - - - -
71. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1 - 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
72. ucn3l ENSDARG00000087241 29 1 1.000 - - - - - - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
73. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - 1.000 - - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
74. tas1r3 ENSDARG00000006341 3 1 1.000 - - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
75. XKR7 ENSDARG00000026333 175 1 - 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
76. dnajb2 ENSDARG00000058644 30 1 - 1.000 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]
77. CU695076.1 CU695076.1 7 1 - 1.000 - - - - - - -
78. si:ch211-237c9.3 si:ch211-237c9.3 17 1 - 1.000 - - - - - - -
79. CABZ01087562.1 CABZ01087562.1 80 1 - 1.000 - - - - - - -
80. si:ch73-49p17.1 69 1 - 1.000 - - - - - - - si:ch73-49p17.1
81. BX465203.1 ENSDARG00000113985 8 1 1.000 - - - - - - - -
82. fabp10a ENSDARG00000038439 4 1 - 1.000 - - - - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
83. TRIM35_4 TRIM35_4 63 1 - - - - 1.000 - - - -
84. GRIK1 GRIK1 1 1 - 1.000 - - - - - - -
85. si:dkeyp-85d8.3 si:dkeyp-85d8.3 0 1 - 1.000 - - - - - - -
86. BX511006.2 BX511006.2 29 1 - 1.000 - - - - - - -
87. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
88. CU694254.1 CU694254.1 4 1 - 1.000 - - - - - - -
89. si:ch211-188i4.4 5 1 1.000 - - - - - - - - si:ch211-188i4.4, transcript variant X3
90. SNORD18_2 SNORD18_2 7 1 1.000 - - - - - - - -
91. cdx1b ENSDARG00000116139 113 1 - 1.000 - - - - - - - caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]
92. bmp1b ENSDARG00000028053 25 1 1.000 - - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
93. si:ch211-113a14.26_3 6 1 - 1.000 - - - - - - - si:ch211-113a14.26
94. cldnj ENSDARG00000058880 59 1 - 1.000 - - - - - - - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
95. ftr76 ENSDARG00000076093 1 1 - 1.000 - - - - - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
96. BX682234.3 BX682234.3 7 1 - 1.000 - - - - - - -
97. cx52.9 ENSDARG00000086453 7 1 1.000 - - - - - - - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
98. zgc:174697 zgc:174697 128 1 - 1.000 - - - - - - -
99. MDFI ENSDARG00000089564 8 1 1.000 - - - - - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
100. dharma ENSDARG00000040955 0 1 - 1.000 - - - - - - - dharma [Source:ZFIN;Acc:ZDB-GENE-990415-22]

There are 636 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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