Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for arhgef3

Gene Name Gene ID Reads Annotation
arhgef3 ENSDARG00000013834 3 Rho guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-050208-773]










Genes with expression patterns similar to arhgef3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgef3 ENSDARG00000013834 3 3 1.000 1.000 - - 1.000 - - - - Rho guanine nucleotide exchange factor (GEF) 3 [Source:ZFIN;Acc:ZDB-GENE-050208-773]
2. l3mbtl3 ENSDARG00000025983 12 2 1.000 1.000 - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
3. ltk ENSDARG00000042861, ENSDARG00000116109 76 2 1.000 1.000 - - - - - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
4. rs1 rs1 70 2 1.000 1.000 - - - - - - -
5. RGS9BP ENSDARG00000086756 65 2 1.000 1.000 - - - - - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
6. ME1 ENSDARG00000053215 8 1.989 - 1.000 - - 0.989 - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
7. gdf10a ENSDARG00000095378 12 1.987 - 1.000 - - 0.987 - - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
8. esr2b ENSDARG00000034181 20 1.976 1.000 - - - 0.976 - - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
9. sprn ENSDARG00000056004 128 1.895 0.895 1.000 - - - - - - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
10. si:ch211-255a21.4 si:ch211-255a21.4 26 1.883 - 1.000 - - 0.883 - - - -
11. lpar6b ENSDARG00000069441 65 1.819 1.000 0.819 - - - - - - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
12. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.728 0.728 1.000 - - - - - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
13. CABZ01038313.1 CABZ01038313.1 79 1.713 - 1.000 - - 0.713 - - - -
14. nipbla ENSDARG00000098272 26 1.711 1.000 0.711 - - - - - - - nipped-B homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060526-121]
15. bicc2 ENSDARG00000076557 77 1.663 0.959 0.704 - - - - - - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
16. COL27A1 COL27A1 94 1.52 0.712 0.808 - - - - - - -
17. nudt18 ENSDARG00000041576 61 1.437 0.724 0.713 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:ZFIN;Acc:ZDB-GENE-050417-388]
18. BAI1_1 BAI1_1 57 1.42 - 0.704 - - 0.716 - - - -
19. slc2a15b ENSDARG00000053269 899 1 - 1.000 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
20. si:ch211-150o20.5 si:ch211-150o20.5 1 1 1.000 - - - - - - - -
21. faim2a ENSDARG00000038784 39 1 - 1.000 - - - - - - - Fas apoptotic inhibitory molecule 2a [Source:ZFIN;Acc:ZDB-GENE-050320-88]
22. MDH1B ENSDARG00000018008 29 1 1.000 - - - - - - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
23. si:dkey-149m13.3 si:dkey-149m13.3 0 1 - 1.000 - - - - - - -
24. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - 1.000 - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
25. zgc:158260 ENSDARG00000101703 103 1 - - - - 1.000 - - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
26. BX649498.2 BX649498.2 40 1 1.000 - - - - - - - -
27. BX321871.2 BX321871.2 1 1 - 1.000 - - - - - - -
28. sowah1 sowah1 1 1 1.000 - - - - - - - -
29. BX469915.2 BX469915.2 48 1 1.000 - - - - - - - -
30. CABZ01074423.1 CABZ01074423.1 8 1 - 1.000 - - - - - - -
31. CU855821.2 CU855821.2 21 1 - 1.000 - - - - - - -
32. SERINC3 SERINC3 21 1 - 1.000 - - - - - - -
33. PARP6 PARP6 119 1 - 1.000 - - - - - - -
34. efemp2b ENSDARG00000020811 116 1 1.000 - - - - - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
35. lppr5b lppr5b 23 1 - 1.000 - - - - - - -
36. BX936303.1 ENSDARG00000103105 26 1 - 1.000 - - - - - - -
37. dharma ENSDARG00000040955 0 1 - 1.000 - - - - - - - dharma [Source:ZFIN;Acc:ZDB-GENE-990415-22]
38. CR556708.1 ENSDARG00000100565 6 1 - 1.000 - - - - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
39. pik3r5 ENSDARG00000102762 56 1 1.000 - - - - - - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
40. si:dkey-56m15.4 si:dkey-56m15.4 39 1 - 1.000 - - - - - - -
41. CU928854.1 CU928854.1 3 1 - 1.000 - - - - - - -
42. CCDC50_1 CCDC50_1 1 1 - 1.000 - - - - - - -
43. XKR7 ENSDARG00000026333 175 1 - 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
44. PGBD4 ENSDARG00000079328 20 1 - 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
45. si:dkey-4j21.1 17 1 - 1.000 - - - - - - - si:dkey-4j21.1, transcript variant X2
46. zgc:195633 19 1 - 1.000 - - - - - - - zgc:195633
47. si:ch211-173p18.3_1 ENSDARG00000035821 36 1 - 1.000 - - - - - - - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
48. si:dkey-176f19.5 si:dkey-176f19.5 10 1 1.000 - - - - - - - -
49. hcrt ENSDARG00000070932 4 1 1.000 - - - - - - - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
50. si:ch73-49p17.1 69 1 - 1.000 - - - - - - - si:ch73-49p17.1
51. scin ENSDARG00000010728, ENSDARG00000111092 437 1 - 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
52. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 1 - 1.000 - - - - - - - zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
53. bcl11ba ENSDARG00000062510 169 1 - 1.000 - - - - - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
54. CABZ01044085.1 CABZ01044085.1 3 1 1.000 - - - - - - - -
55. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1 - 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
56. mstnb ENSDARG00000069133 3 1 - 1.000 - - - - - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
57. GADD45G GADD45G 382 1 - 1.000 - - - - - - -
58. rnf207b ENSDARG00000012409, ENSDARG00000116638 139 1 - 1.000 - - - - - - - ring finger protein 207b [Source:ZFIN;Acc:ZDB-GENE-080227-9]
59. rnf213b ENSDARG00000103551 63 1 - 1.000 - - - - - - - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
60. BX548021.2 BX548021.2 4 1 - 1.000 - - - - - - -
61. si:dkey-222b8.4 ENSDARG00000057227 13 1 1.000 - - - - - - - - si:dkey-222b8.4 [Source:ZFIN;Acc:ZDB-GENE-060503-438]
62. gphnb ENSDARG00000100851 118 1 - 1.000 - - - - - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
63. si:dkeyp-33c10.5 11 1 - 1.000 - - - - - - - si:dkeyp-33c10.5, transcript variant X2
64. zgc:174688 zgc:174688 170 1 1.000 - - - - - - - -
65. si:ch73-27e22.7 ENSDARG00000093345 2 1 - 1.000 - - - - - - - si:ch73-27e22.7 [Source:ZFIN;Acc:ZDB-GENE-070705-235]
66. PGBD4_5 PGBD4_5 16 1 - 1.000 - - - - - - -
67. PLXNA1 PLXNA1 2 1 - - - - 1.000 - - - -
68. fstl5 ENSDARG00000040198 213 1 - 1.000 - - - - - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
69. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1 1.000 - - - - - - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
70. BX000430.1 ENSDARG00000112057 135 1 - 1.000 - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
71. CR847906.1 ENSDARG00000099493 88 1 - 1.000 - - - - - - - protein NLRC3-like [Source:NCBI gene;Acc:571651]
72. ucn3l ENSDARG00000087241 29 1 1.000 - - - - - - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
73. si:dkey-191j3.2 ENSDARG00000101997 1 1 - 1.000 - - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
74. cldnj ENSDARG00000058880 59 1 - 1.000 - - - - - - - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
75. FAM175B FAM175B 23 1 1.000 - - - - - - - -
76. lepa ENSDARG00000091085 11 1 - 1.000 - - - - - - - leptin a [Source:ZFIN;Acc:ZDB-GENE-081001-1]
77. RECK ENSDARG00000090039 15 1 - 1.000 - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
78. si:ch211-113a14.26_3 6 1 - 1.000 - - - - - - - si:ch211-113a14.26
79. cthrc1b ENSDARG00000001971 44 1 - 1.000 - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
80. TRIM35_4 TRIM35_4 63 1 - - - - 1.000 - - - -
81. ftr76 ENSDARG00000076093 1 1 - 1.000 - - - - - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
82. ZP2_3 ZP2_3 2 1 - 1.000 - - - - - - -
83. nrcam nrcam 397 1 - 1.000 - - - - - - -
84. MOV10L1 MOV10L1 21 1 - 1.000 - - - - - - -
85. CU638740.1 CU638740.1 398 1 1.000 - - - - - - - -
86. eif2b5 ENSDARG00000074995 8 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
87. slc12a5b ENSDARG00000078187 329 1 - 1.000 - - - - - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
88. NRSN2 NRSN2 57 1 - 1.000 - - - - - - -
89. slc22a7b slc22a7b 11 1 - - - - 1.000 - - - -
90. BX511061.2 BX511061.2 30 1 1.000 - - - - - - - -
91. CR847504.1 ENSDARG00000102515 29 1 - 1.000 - - - - - - -
92. ciz1a ENSDARG00000089781 20 1 - 1.000 - - - - - - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
93. amn1 ENSDARG00000070478, ENSDARG00000111705 72 1 - 1.000 - - - - - - - antagonist of mitotic exit network 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-13]
94. GRIK1 GRIK1 1 1 - 1.000 - - - - - - -
95. MDFI ENSDARG00000089564 8 1 1.000 - - - - - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
96. eva1bb ENSDARG00000100698 223 1 1.000 - - - - - - - - eva-1 homolog Bb (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-080204-108]
97. tgfa ENSDARG00000053939 1 1 1.000 - - - - - - - - transforming growth factor, alpha [Source:ZFIN;Acc:ZDB-GENE-040724-208]
98. zgc:77112 ENSDARG00000015657 24 1 - 1.000 - - - - - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
99. CABZ01041604.1 ENSDARG00000059854 35 1 1.000 - - - - - - - - E3 ubiquitin-protein ligase RNF182-like [Source:NCBI gene;Acc:797048]
100. mcm5_1 ENSDARG00000019507 10 1 1.000 - - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]

There are 636 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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