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Results for arhgef28

Gene Name Gene ID Reads Annotation
arhgef28 ENSDARG00000060415 142 Rho guanine nucleotide exchange factor (GEF) 28 [Source:ZFIN;Acc:ZDB-GENE-060531-28]










Genes with expression patterns similar to arhgef28

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgef28 ENSDARG00000060415 142 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rho guanine nucleotide exchange factor (GEF) 28 [Source:ZFIN;Acc:ZDB-GENE-060531-28]
2. nmnat1 ENSDARG00000105748 102 1.72 - - - 0.842 - 0.878 - - - nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]
3. CLRN2 ENSDARG00000070321, ENSDARG00000110932 42 1.676 0.778 - - 0.898 - - - - - clarin 2 [Source:ZFIN;Acc:ZDB-GENE-061207-64]
4. efhc1 ENSDARG00000009743 113 1.676 - - - 0.878 - - - 0.798 - EF-hand domain (C-terminal) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1300]
5. RNF39 RNF39 52 1.659 - 0.718 - 0.941 - - - - -
6. C17H15orf41 C17H15orf41 313 1.658 - - - 0.848 - 0.810 - - -
7. shank3b ENSDARG00000063054 148 1.608 0.824 - - 0.784 - - - - - SH3 and multiple ankyrin repeat domains 3b [Source:ZFIN;Acc:ZDB-GENE-041210-74]
8. KHDRBS3 ENSDARG00000101020 408 1.607 - - - 0.854 - 0.753 - - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
9. nhej1 ENSDARG00000058893 172 1.598 - - - - - 0.756 - 0.842 - nonhomologous end-joining factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2515]
10. si:ch73-191k20.3 ENSDARG00000094206 104 1.597 0.869 - - - - - 0.728 - - si:ch73-191k20.3 [Source:ZFIN;Acc:ZDB-GENE-090312-62]
11. MSR1 MSR1 449 1.581 - - - 0.733 - 0.848 - - -
12. bre bre 1233 1.578 - - - - - 0.840 - 0.738 -
13. GRAMD4 GRAMD4 1967 1.573 - - - 0.707 - 0.866 - - -
14. hnrnpa3 ENSDARG00000059351 453 1.571 - 0.734 - 0.837 - - - - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
15. zfyve26 ENSDARG00000040131 87 1.571 - - 0.711 0.860 - - - - - zinc finger, FYVE domain containing 26 [Source:ZFIN;Acc:ZDB-GENE-030131-3286]
16. chmp6b ENSDARG00000102024 37 1.566 - 0.790 - - - - - 0.776 - charged multivesicular body protein 6b [Source:ZFIN;Acc:ZDB-GENE-040924-2]
17. paqr5b ENSDARG00000052688 465 1.566 - - - 0.763 - 0.803 - - - progestin and adipoQ receptor family member Vb [Source:ZFIN;Acc:ZDB-GENE-040801-92]
18. dhrs11b ENSDARG00000031299 409 1.551 - - - - - - 0.798 0.753 - dehydrogenase/reductase (SDR family) member 11b [Source:ZFIN;Acc:ZDB-GENE-040625-155]
19. marveld3 ENSDARG00000099654 113 1.536 - - - 0.828 - - - 0.708 - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
20. znf438 ENSDARG00000061311 524 1.528 - - - 0.804 - 0.724 - - - zinc finger protein 438 [Source:ZFIN;Acc:ZDB-GENE-060929-868]
21. si:dkey-3d4.1 si:dkey-3d4.1 37 1.528 - - - - - 0.756 0.772 - -
22. cep104 ENSDARG00000060361 303 1.523 - - - - - 0.734 - 0.789 - centrosomal protein 104 [Source:ZFIN;Acc:ZDB-GENE-060503-195]
23. SAC3D1 SAC3D1 72 1.522 - 0.718 - - - 0.804 - - -
24. znf800b ENSDARG00000039843 205 1.52 - - - - - 0.787 - 0.733 - zinc finger protein 800b [Source:ZFIN;Acc:ZDB-GENE-040426-1166]
25. zgc:91849 ENSDARG00000104716 237 1.515 - - - - - 0.765 - 0.750 - zgc:91849 [Source:ZFIN;Acc:ZDB-GENE-040718-438]
26. tmem39a ENSDARG00000102746 900 1.498 - - - - - 0.795 0.703 - - transmembrane protein 39A [Source:ZFIN;Acc:ZDB-GENE-030131-1928]
27. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 1.493 - 0.718 - - - - - 0.775 - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
28. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 1.486 - - 0.731 - - 0.755 - - - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
29. fam129aa ENSDARG00000042055 222 1.479 - - - 0.707 - - - 0.772 - family with sequence similarity 129, member Aa [Source:ZFIN;Acc:ZDB-GENE-041014-181]
30. wu:fb59d01 ENSDARG00000089361 171 1.453 - - - - - - 0.749 0.704 - wu:fb59d01 [Source:ZFIN;Acc:ZDB-GENE-030131-1098]
31. nol12 ENSDARG00000038027 2288 1.453 - - - - - 0.742 0.711 - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
32. hlx1 ENSDARG00000009134 484 1.452 - 0.739 - - - - 0.713 - - H2.0-like homeo box 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5304]
33. KIRREL3 ENSDARG00000115903 206 0.96 - 0.960 - - - - - - - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
34. CIR1 ENSDARG00000099733 66 0.959 - - - 0.959 - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
35. ankha ENSDARG00000071724 23 0.955 - 0.955 - - - - - - - ANKH inorganic pyrophosphate transport regulator a [Source:ZFIN;Acc:ZDB-GENE-050913-33]
36. APH1A APH1A 129 0.955 - 0.955 - - - - - - -
37. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 0.955 - 0.955 - - - - - - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
38. map4k2l_1 map4k2l_1 77 0.95 - - - 0.950 - - - - -
39. marveld2a ENSDARG00000025076 917 0.949 - - - - - 0.949 - - - MARVEL domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050411-59]
40. fbxo32 ENSDARG00000040277 93 0.948 - - - 0.948 - - - - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
41. cpla2 cpla2 1031 0.948 - - - - - 0.948 - - -
42. BX088603.3 ENSDARG00000117713 18 0.947 - - - 0.947 - - - - -
43. ccrl1b ccrl1b 154 0.947 - 0.947 - - - - - - -
44. d2hgdh ENSDARG00000060210 362 0.946 - - - 0.946 - - - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
45. cldnk ENSDARG00000042357 103 0.946 - - - - - 0.946 - - - claudin k [Source:ZFIN;Acc:ZDB-GENE-040801-201]
46. mei4 ENSDARG00000043912 10 0.944 - - - 0.944 - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
47. arrdc1b ENSDARG00000079839 236 0.943 - - - - - 0.943 - - - arrestin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080515-2]
48. BX004816.4 BX004816.4 33 0.943 - - - 0.943 - - - - -
49. UBXN11 ENSDARG00000053828 22 0.943 - - - 0.943 - - - - - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
50. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 0.94 - - - 0.940 - - - - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
51. CR790368.1 ENSDARG00000100936 20 0.94 - - - 0.940 - - - - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
52. KCNB2 ENSDARG00000088842 35 0.937 - - - 0.937 - - - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
53. mtmr6 ENSDARG00000016794 425 0.936 - - - - - 0.936 - - - myotubularin related protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5557]
54. FOXO1 FOXO1 85 0.936 - - - - - 0.936 - - -
55. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 0.935 - - - 0.935 - - - - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
56. SERINC3 SERINC3 21 0.934 - - - 0.934 - - - - -
57. krt1-c5 ENSDARG00000026979 325 0.932 - - - 0.932 - - - - - keratin, type 1, gene c5 [Source:ZFIN;Acc:ZDB-GENE-060316-3]
58. amh ENSDARG00000014357 15 0.932 - - - 0.932 - - - - - anti-Mullerian hormone [Source:ZFIN;Acc:ZDB-GENE-050706-192]
59. grxcr1 ENSDARG00000069865 22 0.931 - - - 0.931 - - - - - glutaredoxin, cysteine rich 1 [Source:ZFIN;Acc:ZDB-GENE-070424-166]
60. megf11 ENSDARG00000062686 230 0.931 - - - 0.931 - - - - - multiple EGF-like-domains 11 [Source:ZFIN;Acc:ZDB-GENE-060503-252]
61. gpr22 gpr22 115 0.931 - - - 0.931 - - - - -
62. parp12a ENSDARG00000042496 82 0.929 - - - 0.929 - - - - - poly (ADP-ribose) polymerase family, member 12a [Source:ZFIN;Acc:ZDB-GENE-050419-6]
63. ugt1ab 545 0.929 - - - - - 0.929 - - - UDP glucuronosyltransferase 1 family a, b
64. PEX5L PEX5L 179 0.927 - - - 0.927 - - - - -
65. STAC ENSDARG00000074004 83 0.927 - - - - - 0.927 - - - SH3 and cysteine rich domain [Source:ZFIN;Acc:ZDB-GENE-131121-459]
66. ARHGAP42 ARHGAP42 53 0.926 - - - 0.926 - - - - -
67. si:dkey-12l12.1 ENSDARG00000094422 168 0.926 0.926 - - - - - - - - si:dkey-12l12.1 [Source:ZFIN;Acc:ZDB-GENE-091204-232]
68. Metazoa_SRP_19 Metazoa_SRP_19 17 0.922 - - - 0.922 - - - - -
69. si:ch73-132f6.4 si:ch73-132f6.4 235 0.921 - 0.921 - - - - - - -
70. st3gal4 ENSDARG00000041006 636 0.921 - - - - - 0.921 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-050309-174]
71. si:dkey-17e6.2 si:dkey-17e6.2 72 0.921 - - - 0.921 - - - - -
72. camk1db ENSDARG00000017446 47 0.921 - - - 0.921 - - - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
73. SMARCA4 ENSDARG00000104339 48 0.917 - - - 0.917 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
74. luzp2 ENSDARG00000068247 80 0.917 - - - 0.917 - - - - - leucine zipper protein 2 [Source:ZFIN;Acc:ZDB-GENE-060503-278]
75. CABZ01066772.1 CABZ01066772.1 299 0.915 - - - - - 0.915 - - -
76. megf6a ENSDARG00000079199 103 0.913 - - - 0.913 - - - - - multiple EGF-like-domains 6a [Source:ZFIN;Acc:ZDB-GENE-090312-12]
77. npdc1 npdc1 221 0.913 - - - 0.913 - - - - -
78. CU463790.1 CU463790.1 60 0.913 - - - 0.913 - - - - -
79. rassf4 ENSDARG00000012460 43 0.912 - - - 0.912 - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
80. atp2b1b ENSDARG00000007788 56 0.912 - - - 0.912 - - - - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
81. ak7b ENSDARG00000017023 25 0.912 - - - 0.912 - - - - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
82. hao2 ENSDARG00000027992, ENSDARG00000116498 615 0.912 - - - - - 0.912 - - - hydroxyacid oxidase 2 (long chain) [Source:ZFIN;Acc:ZDB-GENE-040426-1239]
83. VDR VDR 489 0.91 - - - 0.910 - - - - -
84. ubxn8 ENSDARG00000098902, ENSDARG00000113836 152 0.909 - - - 0.909 - - - - - UBX domain protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-266]
85. cfh ENSDARG00000100442, ENSDARG00000109660 2043 0.905 - - - - - 0.905 - - - complement factor H [Source:ZFIN;Acc:ZDB-GENE-050208-661]
86. rpia ENSDARG00000056640, ENSDARG00000110576 8288 0.904 - - - - - 0.904 - - - ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:ZFIN;Acc:ZDB-GENE-041114-24]
87. WNT7A WNT7A 320 0.902 - - - - - 0.902 - - -
88. mfsd6a ENSDARG00000032318 228 0.902 - - - - - 0.902 - - - major facilitator superfamily domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-050208-335]
89. si:ch211-199m9.3 50 0.9 - - - 0.900 - - - - - si:ch211-199m9.3, transcript variant X3
90. ahcyl1 ENSDARG00000056331 1765 0.899 - - - - - 0.899 - - - adenosylhomocysteinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-021206-7]
91. mthfd2 ENSDARG00000098646, ENSDARG00000112356, ENSDARG00000117060 179 0.899 - - - 0.899 - - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-040704-20]
92. si:dkeyp-22c6.1 si:dkeyp-22c6.1 71 0.898 - - - - - 0.898 - - -
93. CT573393.1 CT573393.1 97 0.898 - - - 0.898 - - - - -
94. lef1 ENSDARG00000031894 492 0.896 - - - 0.896 - - - - - lymphoid enhancer-binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-990714-26]
95. wnt10a ENSDARG00000017155 491 0.896 - - - - - 0.896 - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
96. ncam1b ENSDARG00000007220 233 0.896 - - - 0.896 - - - - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
97. abl2 ENSDARG00000013841 145 0.895 - - - 0.895 - - - - - c-abl oncogene 2, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020809-2]
98. dcbld1 ENSDARG00000015907 36 0.895 - 0.895 - - - - - - - discoidin, CUB and LCCL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050913-77]
99. coro2ba ENSDARG00000079440 420 0.894 - - - 0.894 - - - - - coronin, actin binding protein, 2Ba [Source:ZFIN;Acc:ZDB-GENE-050518-1]
100. CR790363.1 ENSDARG00000097364 145 0.894 - - - 0.894 - - - - -

There are 1082 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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