Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arhgef2

Gene Name Gene ID Reads Annotation
arhgef2 ENSDARG00000075819 2173 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]










Genes with expression patterns similar to arhgef2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgef2 ENSDARG00000075819 2173 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
2. rbmx ENSDARG00000014244 3445 3.065 0.763 0.756 0.773 - - - - - 0.773 RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
3. TAF15 ENSDARG00000070019 5102 3.045 - 0.746 0.744 - - - - 0.754 0.801 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
4. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.408 - - 0.757 - - - - 0.812 0.839 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
5. dpysl4 ENSDARG00000103490 534 2.366 - - - - - 0.787 - 0.856 0.723 dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
6. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 2.363 - - 0.736 - - 0.774 - 0.853 - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
7. TMEM57 TMEM57 260 2.348 - - - - - 0.725 - 0.771 0.852
8. SPIN4_1 SPIN4_1 2562 2.333 - - 0.733 0.805 - - - 0.795 -
9. DACT3_1 DACT3_1 1235 2.329 - - - - - 0.746 - 0.778 0.805
10. srpk1b ENSDARG00000031560 2079 2.323 - - 0.712 - - 0.804 - - 0.807 SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
11. bach2b ENSDARG00000004074 1079 2.318 - - - - - 0.827 - 0.774 0.717 BTB and CNC homology 1, basic leucine zipper transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-041001-139]
12. sf1 ENSDARG00000008188 5142 2.307 - - - - - 0.754 0.703 - 0.850 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
13. polr2a ENSDARG00000099966 5706 2.293 - - 0.704 0.840 - - 0.749 - - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
14. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 2.29 - - 0.745 - - 0.804 - - 0.741 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
15. fscn1a ENSDARG00000059680 3999 2.281 - - - - - 0.776 - 0.786 0.719 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
16. parp1 ENSDARG00000019529 6787 2.277 - - 0.731 - - - - 0.790 0.756 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
17. TNKS TNKS 2775 2.264 - 0.719 - - - 0.805 - - 0.740
18. ctnnb1 ENSDARG00000014571 12004 2.249 - 0.734 0.736 - - - - 0.779 - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
19. ilf2 ENSDARG00000014591 14543 2.241 - - 0.745 - - - - 0.705 0.791 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
20. st18 663 2.225 - - - - - 0.711 - 0.781 0.733 suppression of tumorigenicity 18, zinc finger
21. fbl ENSDARG00000053912 5891 2.21 0.744 - - - - - - 0.713 0.753 fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
22. atoh1b ENSDARG00000099564 494 2.2 - - - - - 0.780 - 0.714 0.706 atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
23. smek1 ENSDARG00000042187 3509 2.186 - 0.702 0.718 - - - - - 0.766 SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
24. srsf9 ENSDARG00000008097 2405 2.16 - 0.728 0.722 - - - 0.710 - - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
25. ldb1a ENSDARG00000010137 3035 1.696 - - - - - - - 0.876 0.820 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
26. marcksa ENSDARG00000004049 2518 1.668 - - - - - - - 0.818 0.850 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
27. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.656 - - - - - - - 0.789 0.867 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
28. prpsap2 ENSDARG00000019326 1463 1.656 - - - - - - - 0.832 0.824 phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2077]
29. kmt2d ENSDARG00000037060 1232 1.644 - - - - - 0.839 - - 0.805 lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]
30. gpsm1a ENSDARG00000092517 784 1.633 - - - - - - - 0.837 0.796 G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
31. dnaja1l dnaja1l 1536 1.632 - - - - - 0.849 - 0.783 -
32. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 1.63 - - - - - 0.782 - - 0.848 syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
33. lphn3.1 lphn3.1 756 1.63 - - - - - - - 0.767 0.863
34. nin ENSDARG00000060298 1558 1.628 - - - - - 0.794 - - 0.834 ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
35. mbd3a ENSDARG00000061774 4047 1.628 - 0.888 - - - - - - 0.740 methyl-CpG binding domain protein 3a [Source:ZFIN;Acc:ZDB-GENE-030131-9077]
36. ctnna1 ENSDARG00000102441 7984 1.625 - 0.732 - - - - 0.893 - - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
37. mcm5 ENSDARG00000019507 6407 1.623 - 0.801 - - - - - - 0.822 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
38. gpm6ab ENSDARG00000004621 5825 1.621 - - - - - - - 0.717 0.904 glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
39. clvs2 ENSDARG00000053122 1390 1.618 - - - - - - - 0.843 0.775 clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
40. pcdh19 ENSDARG00000034344 2378 1.615 - - - - - - - 0.808 0.807 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
41. cdc34a ENSDARG00000069708 1145 1.613 - 0.723 - - - 0.890 - - - cell division cycle 34 homolog (S. cerevisiae) a [Source:ZFIN;Acc:ZDB-GENE-040426-713]
42. kifap3b ENSDARG00000006862 613 1.609 - - - - - 0.780 - 0.829 - kinesin-associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2219]
43. unc119b ENSDARG00000044362 1528 1.609 - - - - - 0.868 - - 0.741 unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
44. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.609 - - - - - - - 0.791 0.818 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
45. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.6 - - - - - - - 0.846 0.754 zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
46. nfil3 ENSDARG00000042977, ENSDARG00000110085 1565 1.598 - - - - - - 0.895 0.703 - nuclear factor, interleukin 3 regulated [Source:ZFIN;Acc:ZDB-GENE-040822-28]
47. igfbp1a ENSDARG00000099351 1717 1.598 - - - 0.751 - 0.847 - - - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
48. grsf1 ENSDARG00000053021 2752 1.594 - 0.773 - - - 0.821 - - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
49. kif11 ENSDARG00000010948 4973 1.591 - 0.856 - - - - - - 0.735 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
50. hmgb3a ENSDARG00000056725 15668 1.59 - 0.785 - - - - - - 0.805 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
51. dhx9 ENSDARG00000079725 1241 1.585 - - - - - - - 0.814 0.771 DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
52. zbtb18 ENSDARG00000028228 3653 1.585 - - - - - - - 0.756 0.829 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
53. lrrc47 ENSDARG00000053138 417 1.584 - - - - - 0.831 - 0.753 - leucine rich repeat containing 47 [Source:ZFIN;Acc:ZDB-GENE-060503-289]
54. TTYH1 ENSDARG00000076804 399 1.584 - - - - - 0.770 - - 0.814 tweety family member 1 [Source:ZFIN;Acc:ZDB-GENE-100922-257]
55. mrps9 ENSDARG00000061505 1636 1.584 - 0.731 - - - 0.853 - - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
56. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.582 - - - - - 0.784 - - 0.798 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
57. ttc9b ENSDARG00000068421 251 1.582 - - - - - - - 0.830 0.752 tetratricopeptide repeat domain 9B [Source:ZFIN;Acc:ZDB-GENE-050419-67]
58. fbxl16 ENSDARG00000060915 259 1.581 - - - - - 0.790 - 0.791 - F-box and leucine-rich repeat protein 16 [Source:ZFIN;Acc:ZDB-GENE-120215-180]
59. nxf1 ENSDARG00000055076 3251 1.581 - - - - - 0.810 - - 0.771 nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
60. magoh ENSDARG00000038635, ENSDARG00000109837 2880 1.581 - - - - - - - 0.777 0.804 mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
61. ptgs2a ENSDARG00000004539 1207 1.58 - - - - - 0.769 0.811 - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
62. DSCAML1 ENSDARG00000098057 321 1.578 - - - - - 0.801 - - 0.777 Down syndrome cell adhesion molecule like 1 [Source:ZFIN;Acc:ZDB-GENE-110601-1]
63. SCAF8 1618 1.578 - 0.776 - - - - - - 0.802 SR-related CTD-associated factor 8, transcript variant X3
64. srrm1 ENSDARG00000001244 4972 1.577 - 0.838 0.739 - - - - - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
65. cdk6 ENSDARG00000070228 1778 1.576 - - - - - - - 0.754 0.822 cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
66. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.572 - - - - - 0.786 - 0.786 - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
67. mapk8ip2 ENSDARG00000063157 467 1.567 - - - - - 0.761 - 0.806 - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
68. zgc:65895 ENSDARG00000034086 1258 1.567 - - - - - 0.805 - 0.762 - zgc:65895 [Source:ZFIN;Acc:ZDB-GENE-040426-1466]
69. smarca5 ENSDARG00000052348 15433 1.566 - 0.708 - - - - - - 0.858 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
70. zgc:113025 zgc:113025 619 1.565 - 0.749 - - - 0.816 - - -
71. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 1.565 - - - - - - - 0.712 0.853 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
72. nrsn1 ENSDARG00000111235 123 1.563 - - - - - 0.761 - 0.802 - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
73. eif4h ENSDARG00000042252 6742 1.562 - 0.768 - - - - - - 0.794 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
74. smc1al ENSDARG00000058203 8838 1.561 - - 0.726 - - - - - 0.835 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
75. anp32a ENSDARG00000006487 28249 1.56 - - - - - - 0.823 0.737 - acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
76. nr2f1a ENSDARG00000052695 5037 1.559 - - - - - 0.765 - - 0.794 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
77. tmem127 ENSDARG00000030981 1389 1.559 - 0.788 - - - - - - 0.771 transmembrane protein 127 [Source:ZFIN;Acc:ZDB-GENE-050522-97]
78. znf592 ENSDARG00000060885 776 1.558 - - - - - 0.746 - 0.812 - zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
79. nono ENSDARG00000020482, ENSDARG00000115783 12482 1.558 - - - - - 0.728 - - 0.830 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
80. fzr1 fzr1 2984 1.557 - 0.808 - - - - - - 0.749
81. kdm6a ENSDARG00000061759 1154 1.556 - - - 0.757 - - 0.799 - - lysine (K)-specific demethylase 6A [Source:ZFIN;Acc:ZDB-GENE-081105-56]
82. lhx1a ENSDARG00000014018 958 1.556 - - - 0.746 - - - - 0.810 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
83. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.554 - - - - - 0.799 - - 0.755 cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
84. polb ENSDARG00000003749 2049 1.554 - - - - - 0.847 - - 0.707 polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
85. syt11b ENSDARG00000056105 578 1.553 - - - - - - - 0.786 0.767 synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
86. CLIP3 ENSDARG00000054456 734 1.553 - - - - - 0.772 - 0.781 - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
87. dab2ipa ENSDARG00000069484 1138 1.552 - - 0.706 - - - - 0.846 - DAB2 interacting protein a [Source:ZFIN;Acc:ZDB-GENE-081104-516]
88. ppp4r2a ENSDARG00000026540 1782 1.551 - - - - - 0.796 - 0.755 - protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
89. snrpa ENSDARG00000018890 4593 1.548 - 0.747 - - - - - - 0.801 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
90. acvr1b acvr1b 2963 1.548 - - - - - - - 0.714 0.834
91. sept9b ENSDARG00000103900, ENSDARG00000113442 1495 1.547 - 0.776 - - - 0.771 - - - septin 9b [Source:ZFIN;Acc:ZDB-GENE-050327-17]
92. SLC22A23_1 SLC22A23_1 308 1.547 - - - - - - - 0.780 0.767
93. BX539313.4 BX539313.4 1858 1.546 - - - 0.826 - - - 0.720 -
94. anapc13 ENSDARG00000078435 996 1.542 - - - - - 0.777 - 0.765 - anaphase promoting complex subunit 13 [Source:ZFIN;Acc:ZDB-GENE-091204-298]
95. hoxb7a ENSDARG00000056030 1212 1.541 - 0.706 - - - 0.835 - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
96. rcor2 ENSDARG00000008278 1678 1.538 - - - - - 0.750 - 0.788 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
97. hdgfrp2 7462 1.536 - 0.752 - - - 0.784 - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
98. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.536 - - - - - - - 0.804 0.732 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
99. slc38a5b ENSDARG00000014587 8461 1.536 - 0.823 - - - - 0.713 - - solute carrier family 38, member 5b [Source:ZFIN;Acc:ZDB-GENE-040718-395]
100. sumo3a ENSDARG00000028119 13447 1.535 - - - - - 0.728 - - 0.807 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]

There are 2564 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA