Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arhgef16

Gene Name Gene ID Reads Annotation
arhgef16 ENSDARG00000077114 759 Rho guanine nucleotide exchange factor (GEF) 16 [Source:ZFIN;Acc:ZDB-GENE-081104-446]










Genes with expression patterns similar to arhgef16

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgef16 ENSDARG00000077114 759 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rho guanine nucleotide exchange factor (GEF) 16 [Source:ZFIN;Acc:ZDB-GENE-081104-446]
2. prkra ENSDARG00000076718 606 2.535 0.729 0.910 - - - - - 0.896 - protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
3. uevld ENSDARG00000009266, ENSDARG00000116754 377 2.379 - 0.899 - 0.779 0.701 - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
4. man2b1 ENSDARG00000001897 1042 2.307 - 0.780 - - - 0.709 0.818 - - mannosidase, alpha, class 2B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-52]
5. CDPF1 ENSDARG00000095705 553 2.271 - - - 0.704 0.793 0.774 - - - cysteine rich DPF motif domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33710]
6. fam63b 484 1.78 - 0.909 - - - - - 0.871 - family with sequence similarity 63, member B
7. CABZ01114089.1 CABZ01114089.1 127 1.771 - 0.882 - - - - - 0.889 -
8. ttpa ENSDARG00000027584 640 1.77 - 0.915 - - - - - 0.855 - tocopherol (alpha) transfer protein [Source:ZFIN;Acc:ZDB-GENE-030131-4631]
9. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.739 - 0.936 - - 0.803 - - - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
10. slc2a8 ENSDARG00000104278 764 1.715 0.839 - - - - - - 0.876 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
11. pggt1b ENSDARG00000103464 441 1.707 - - - - 0.832 - - 0.875 - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
12. NUDT8 ENSDARG00000007722 329 1.701 - 0.886 - 0.815 - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
13. aars2 ENSDARG00000107385 190 1.698 - - - - 0.816 - - 0.882 - alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-213]
14. si:ch211-51h9.7 ENSDARG00000074720 227 1.686 - 0.830 - - 0.856 - - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
15. clip2 ENSDARG00000059596 529 1.68 - - - - 0.810 - - 0.870 - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
16. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 1.671 - - - 0.815 - - - 0.856 - si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
17. kita ENSDARG00000043317 1091 1.667 0.830 - - - - - - 0.837 - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-980526-464]
18. CABZ01039859.1 ENSDARG00000076361 540 1.667 - - - - 0.833 - - 0.834 - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
19. tmem8a ENSDARG00000032795 677 1.666 - 0.949 - - 0.717 - - - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
20. stmn4 ENSDARG00000030106 518 1.661 - - - 0.805 - - - 0.856 - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
21. fancd2 ENSDARG00000053574 247 1.661 - 0.934 - - 0.727 - - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
22. CU693494.3 CU693494.3 169 1.66 - - - - 0.804 - - 0.856 -
23. aldh2.2 ENSDARG00000028087 303 1.639 - - - 0.770 0.869 - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
24. fam105bb fam105bb 1253 1.639 - 0.911 - - 0.728 - - - -
25. ror2 ENSDARG00000076227, ENSDARG00000116710 1498 1.636 - - - - - 0.795 - 0.841 - receptor tyrosine kinase-like orphan receptor 2 [Source:ZFIN;Acc:ZDB-GENE-060427-5]
26. heca ENSDARG00000042877 200 1.619 - - - 0.812 0.807 - - - - hdc homolog, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-041001-173]
27. FAM126B 588 1.619 - 0.772 - - - - - 0.847 - family with sequence similarity 126 member B
28. znf277 ENSDARG00000025346, ENSDARG00000113592 288 1.617 - - - 0.770 - - - 0.847 - zinc finger protein 277 [Source:ZFIN;Acc:ZDB-GENE-040426-1633]
29. capn7 ENSDARG00000102987 386 1.615 - 0.804 - 0.811 - - - - - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
30. dmrt2a ENSDARG00000015072, ENSDARG00000113160 895 1.614 - - - 0.792 - - - 0.822 - doublesex and mab-3 related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-990621-7]
31. rab40c ENSDARG00000061208 1072 1.614 - 0.864 - - - 0.750 - - - RAB40c, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030515-1]
32. CACHD1 ENSDARG00000061590 1287 1.614 - 0.750 - - - - - 0.864 - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
33. fam114a1 ENSDARG00000008287, ENSDARG00000116401 949 1.61 - - - 0.838 - - 0.772 - - family with sequence similarity 114, member A1 [Source:ZFIN;Acc:ZDB-GENE-070410-52]
34. RAPGEFL1 ENSDARG00000079912 1074 1.605 - 0.787 - - - - - 0.818 - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
35. prkcsh ENSDARG00000004470 1424 1.587 0.871 0.716 - - - - - - - protein kinase C substrate 80K-H [Source:ZFIN;Acc:ZDB-GENE-040426-770]
36. mpv17 ENSDARG00000032431 1225 1.585 - - - - 0.736 - 0.849 - - MpV17 mitochondrial inner membrane protein [Source:ZFIN;Acc:ZDB-GENE-040426-1168]
37. clasp1a ENSDARG00000010280 1158 1.582 - - - - - 0.725 - 0.857 - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
38. sult2st2 ENSDARG00000103785 370 1.578 - 0.863 - - - - 0.715 - - sulfotransferase family 2, cytosolic sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-061117-5]
39. wdr18 ENSDARG00000041113 810 1.576 - 0.869 - - - - - 0.707 - WD repeat domain 18 [Source:ZFIN;Acc:ZDB-GENE-040905-4]
40. PLLP ENSDARG00000062756, ENSDARG00000109949 114 1.574 - - - 0.830 - - 0.744 - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
41. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.571 - 0.840 - - - - - 0.731 -
42. TESK1_1 TESK1_1 276 1.57 - - - - - - 0.769 0.801 -
43. cdca5 ENSDARG00000044437 2041 1.57 - 0.822 - - 0.748 - - - - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
44. hsd17b14 ENSDARG00000054842 1394 1.568 0.791 - - - - - - 0.777 - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
45. ssbp3a ENSDARG00000058237 87 1.565 0.752 - - - 0.813 - - - - single stranded DNA binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-070705-484]
46. deptor ENSDARG00000040930 191 1.561 - - - 0.722 0.839 - - - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
47. si:dkey-43f9.4 si:dkey-43f9.4 180 1.56 0.735 - - 0.825 - - - - -
48. pdcd11 ENSDARG00000052480 2791 1.558 - - - - - 0.728 - 0.830 - programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
49. nol6 ENSDARG00000059711, ENSDARG00000115621 853 1.556 - 0.738 - - - - - 0.818 - nucleolar protein 6 (RNA-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-6294]
50. tpst1 ENSDARG00000073872 2490 1.553 - - - 0.743 - 0.810 - - - tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
51. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 1.547 - - - - - 0.742 - 0.805 - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
52. efna5a ENSDARG00000089790 1007 1.545 - 0.819 - - - - - 0.726 - ephrin-A5a [Source:ZFIN;Acc:ZDB-GENE-001128-1]
53. ZFAT ENSDARG00000077987 205 1.545 - - - 0.824 - - 0.721 - - zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
54. tmem259 ENSDARG00000060442 1141 1.531 - 0.750 - - - - - 0.781 - transmembrane protein 259 [Source:ZFIN;Acc:ZDB-GENE-080225-14]
55. astn1 ENSDARG00000068323 348 1.527 - 0.823 - - 0.704 - - - - astrotactin 1 [Source:ZFIN;Acc:ZDB-GENE-050320-140]
56. lamtor3 ENSDARG00000057075 2282 1.525 - - - - 0.741 - 0.784 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:ZFIN;Acc:ZDB-GENE-050522-345]
57. zgc:92380 ENSDARG00000041339 1867 1.52 - 0.777 - - - 0.743 - - - zgc:92380 [Source:ZFIN;Acc:ZDB-GENE-040801-221]
58. dopey2 1088 1.514 - - - - - - 0.731 0.783 - dopey family member 2, transcript variant X2
59. aacs ENSDARG00000012468 1138 1.513 - - - 0.784 - - - 0.729 - acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
60. babam1 ENSDARG00000077526 776 1.513 - 0.808 - - 0.705 - - - - BRISC and BRCA1 A complex member 1 [Source:ZFIN;Acc:ZDB-GENE-040808-6]
61. AREL1 ENSDARG00000100359 260 1.501 - - - 0.761 0.740 - - - - apoptosis resistant E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20363]
62. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 1.492 - - - - - 0.720 - 0.772 - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
63. acat1 ENSDARG00000045888 1488 1.486 - 0.765 - - - - - 0.721 - acetyl-CoA acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040808-68]
64. krt17 ENSDARG00000094041 7683 1.48 - 0.731 - - 0.749 - - - - keratin 17 [Source:ZFIN;Acc:ZDB-GENE-060503-86]
65. si:ch211-152p11.4 ENSDARG00000079705 2341 1.48 - 0.755 - - - - 0.725 - - si:ch211-152p11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-764]
66. sept8a ENSDARG00000032606 2737 1.473 - - - - - 0.722 0.751 - - septin 8a [Source:ZFIN;Acc:ZDB-GENE-030131-309]
67. grb10a ENSDARG00000002013 1349 1.467 0.730 - - - - 0.737 - - - growth factor receptor-bound protein 10a [Source:ZFIN;Acc:ZDB-GENE-040822-32]
68. phyhd1 ENSDARG00000029905 1394 1.465 - 0.763 - 0.702 - - - - - phytanoyl-CoA dioxygenase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-159]
69. mapk13 ENSDARG00000058470 1001 1.461 - 0.745 - - - - - 0.716 - mitogen-activated protein kinase 13 [Source:ZFIN;Acc:ZDB-GENE-041111-17]
70. oafa ENSDARG00000075851 2015 1.448 - 0.724 - - - - - 0.724 - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
71. esrp1 ENSDARG00000011245 2097 1.441 - - 0.709 - 0.732 - - - - epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
72. dus1l ENSDARG00000089260 336 1.434 - - - 0.718 - - - 0.716 - dihydrouridine synthase 1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1435]
73. csrp2 ENSDARG00000011961 1003 1.434 - - - 0.721 - - 0.713 - - cysteine and glycine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1863]
74. abcd4 ENSDARG00000061770 373 1.432 0.729 - - 0.703 - - - - - ATP-binding cassette, sub-family D (ALD), member 4 [Source:ZFIN;Acc:ZDB-GENE-050517-30]
75. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.426 - - - - - 0.713 - 0.713 - G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
76. caspb ENSDARG00000052039 4329 0.969 - 0.969 - - - - - - - caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
77. mat2al ENSDARG00000063665, ENSDARG00000109637, ENSDARG00000111463 447 0.964 - 0.964 - - - - - - - methionine adenosyltransferase II, alpha-like [Source:ZFIN;Acc:ZDB-GENE-060421-5255]
78. afap1 ENSDARG00000055284 730 0.954 - 0.954 - - - - - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
79. ctdnep1b ENSDARG00000035781 65 0.948 - 0.948 - - - - - - - CTD nuclear envelope phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-041114-152]
80. armc1 ENSDARG00000013861 175 0.948 - 0.948 - - - - - - - armadillo repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-33]
81. si:ch211-89o5.1 si:ch211-89o5.1 91 0.947 - 0.947 - - - - - - -
82. exoc3l4 ENSDARG00000058180 923 0.946 - 0.946 - - - - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
83. amdhd2 ENSDARG00000100376 656 0.946 - 0.946 - - - - - - - amidohydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1871]
84. zbtb1 ENSDARG00000023040, ENSDARG00000112571 211 0.944 - 0.944 - - - - - - - zinc finger and BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-126]
85. cttnbp2 ENSDARG00000040991 1697 0.944 - - - - - - - 0.944 - cortactin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8134]
86. CABZ01085888.1 CABZ01085888.1 868 0.942 - 0.942 - - - - - - -
87. fbxo42 ENSDARG00000087545 262 0.941 - 0.941 - - - - - - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
88. trpm4 trpm4 501 0.939 - 0.939 - - - - - - -
89. f7 ENSDARG00000034862 405 0.938 - 0.938 - - - - - - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
90. BX000999.4_1 BX000999.4_1 222 0.937 - 0.937 - - - - - - -
91. HDAC5 ENSDARG00000075139 1287 0.937 - 0.937 - - - - - - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
92. SMAD4_1 SMAD4_1 377 0.934 - 0.934 - - - - - - -
93. si:dkey-229b18.3 ENSDARG00000095912 568 0.933 - 0.933 - - - - - - - si:dkey-229b18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6870]
94. rnls ENSDARG00000012453 338 0.932 - 0.932 - - - - - - - renalase, FAD-dependent amine oxidase [Source:ZFIN;Acc:ZDB-GENE-040718-351]
95. rnf34a ENSDARG00000038300 179 0.929 - 0.929 - - - - - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
96. tbcelb ENSDARG00000019525 299 0.929 - 0.929 - - - - - - - tubulin folding cofactor E-like b [Source:ZFIN;Acc:ZDB-GENE-100921-13]
97. dirc2 ENSDARG00000009783 484 0.929 - 0.929 - - - - - - - disrupted in renal carcinoma 2 [Source:ZFIN;Acc:ZDB-GENE-040912-167]
98. rgs19 ENSDARG00000077385 783 0.928 - 0.928 - - - - - - - regulator of G protein signaling 19 [Source:ZFIN;Acc:ZDB-GENE-080723-72]
99. C3H17orf103 C3H17orf103 973 0.928 - 0.928 - - - - - - -
100. nudt5 ENSDARG00000078073 779 0.927 - 0.927 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:ZFIN;Acc:ZDB-GENE-040625-63]

There are 1329 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA