Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arhgef11

Gene Name Gene ID Reads Annotation
arhgef11 ENSDARG00000052482 24 Rho guanine nucleotide exchange factor (GEF) 11 [Source:ZFIN;Acc:ZDB-GENE-070604-1]










Genes with expression patterns similar to arhgef11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgef11 ENSDARG00000052482 24 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000 Rho guanine nucleotide exchange factor (GEF) 11 [Source:ZFIN;Acc:ZDB-GENE-070604-1]
2. si:dkey-187i8.2 ENSDARG00000096624 8 1.757 - 0.802 - - 0.955 - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
3. CR848836.1 ENSDARG00000097508 1 1.741 - - - 0.931 - - - - 0.810
4. CABZ01069022.1 ENSDARG00000105692 16 1.721 0.766 - - - 0.955 - - - - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
5. si:dkey-30j22.1 ENSDARG00000042829 25 1.706 - 0.922 - - 0.784 - - - - si:dkey-30j22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-184]
6. FAM177B 9 1.696 - - - - 0.888 - - 0.808 - family with sequence similarity 177 member B
7. cabp7b ENSDARG00000060846 5 1.679 - - - 0.931 - - - - 0.748 calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
8. pag1 ENSDARG00000055875 21 1.661 - 0.802 - 0.859 - - - - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
9. CR854891.1 CR854891.1 7 1.66 - - - - 0.850 - - - 0.810
10. panx3 ENSDARG00000004627 7 1.649 - 0.802 - - 0.847 - - - - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
11. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1.626 - 0.802 - 0.824 - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
12. AC024175.21 AC024175.21 10 1.612 - 0.802 - - - - - - 0.810
13. mstnb ENSDARG00000069133 3 1.612 - 0.802 - - - - - - 0.810 myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
14. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1.605 - 0.802 - - 0.803 - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
15. si:dkey-229d11.5 ENSDARG00000094392 33 1.602 0.703 - - 0.899 - - - - - si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
16. ARX ARX 71 1.596 0.794 0.802 - - - - - - -
17. si:ch211-255a21.4 si:ch211-255a21.4 26 1.596 0.794 0.802 - - - - - - -
18. BX465848.3 BX465848.3 4 1.582 - - - 0.774 - - - 0.808 -
19. rtn4rl2a ENSDARG00000052012 5 1.576 - 0.802 - 0.774 - - - - - reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
20. SEMA6B SEMA6B 35 1.528 - 0.802 - - - - - - 0.726
21. CABZ01089980.1 ENSDARG00000117446 16 1.523 0.721 0.802 - - - - - - -
22. lss ENSDARG00000061274 68 1.506 0.762 0.744 - - - - - - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
23. yod1 ENSDARG00000008542 56 1 - - - - - - - 1.000 - YOD1 deubiquitinase [Source:ZFIN;Acc:ZDB-GENE-050417-217]
24. hip1r hip1r 10 1 - - - 1.000 - - - - -
25. prph2a ENSDARG00000038018 2 1 - - - - - - - 1.000 - peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
26. fam196ab 2 1 - - - - - - - 1.000 - family with sequence similarity 196, member Ab
27. GPBAR1 ENSDARG00000023302 2 1 - - - 1.000 - - - - - G protein-coupled bile acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120315-1]
28. OXLD1 8 1 - - - - - - - 1.000 - oxidoreductase-like domain containing 1, transcript variant X1
29. MASP1 ENSDARG00000068726 34 1 - - - 1.000 - - - - - mannan-binding lectin serine peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-110421-4]
30. FKBP15 FKBP15 15 0.991 - - - - - - - - 0.991
31. BX088525.2 ENSDARG00000117222 11 0.981 - 0.981 - - - - - - -
32. SUN2 SUN2 86 0.981 - 0.981 - - - - - - -
33. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 0.981 - 0.981 - - - - - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
34. shhb ENSDARG00000038867 338 0.978 - 0.978 - - - - - - - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
35. si:rp71-10g3.1 si:rp71-10g3.1 6 0.961 - - - - - - - - 0.961
36. CR382372.1 ENSDARG00000096684 2 0.961 - - - - - - - - 0.961 si:dkeyp-122d12.1 [Source:NCBI gene;Acc:101885973]
37. si:dkey-266f7.10 ENSDARG00000086613 7 0.96 - - - - 0.960 - - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
38. atp2b3b ENSDARG00000023445 1424 0.957 - 0.957 - - - - - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
39. amigo3 ENSDARG00000074469 39 0.957 - 0.957 - - - - - - - adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
40. si:ch211-243a20.3 ENSDARG00000092240 151 0.957 - 0.957 - - - - - - - si:ch211-243a20.3 [Source:ZFIN;Acc:ZDB-GENE-061207-28]
41. si:dkey-156m18.1 si:dkey-156m18.1 13 0.957 - 0.957 - - - - - - -
42. helt ENSDARG00000056400 482 0.957 - 0.957 - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
43. cftr ENSDARG00000041107, ENSDARG00000110312 56 0.957 - 0.957 - - - - - - - cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) [Source:ZFIN;Acc:ZDB-GENE-050517-20]
44. cadpsb ENSDARG00000070567 458 0.957 - 0.957 - - - - - - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
45. si:dkey-32m20.1 43 0.957 - 0.957 - - - - - - - si:dkey-32m20.1
46. ENSDARG00000076577 ENSDARG00000076577 1 0.955 - - - - 0.955 - - - -
47. AKAP13 ENSDARG00000079994 1 0.955 - - - - 0.955 - - - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
48. si:dkeyp-82b4.2 ENSDARG00000112648 14 0.955 - - - - 0.955 - - - - si:dkeyp-82b4.2 [Source:ZFIN;Acc:ZDB-GENE-060503-561]
49. U6_5 U6_5 1 0.955 - - - - 0.955 - - - -
50. SENP6 SENP6 1 0.955 - - - - 0.955 - - - -
51. si:dkeyp-98a7.9 ENSDARG00000087584, ENSDARG00000113815 5 0.955 - - - - 0.955 - - - - si:dkeyp-98a7.9 [Source:ZFIN;Acc:ZDB-GENE-050208-680]
52. NRP2 NRP2 5 0.955 - - - - 0.955 - - - -
53. arhgap21a ENSDARG00000104295 1 0.955 - - - - 0.955 - - - - Rho GTPase activating protein 21a [Source:ZFIN;Acc:ZDB-GENE-090918-5]
54. cyp4f3 ENSDARG00000053530 10 0.955 - - - - 0.955 - - - - cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070410-108]
55. si:dkey-121b10.8 si:dkey-121b10.8 3 0.955 - - - - 0.955 - - - -
56. KCNN4 ENSDARG00000086091 3 0.955 - - - - 0.955 - - - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 [Source:ZFIN;Acc:ZDB-GENE-131127-192]
57. SORT1 SORT1 33 0.955 - - - - 0.955 - - - -
58. GPR108_1 GPR108_1 2 0.955 - - - - 0.955 - - - -
59. TNS3_1 TNS3_1 8 0.955 - - - - 0.955 - - - -
60. slc32a1 ENSDARG00000059775 1092 0.955 - 0.955 - - - - - - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
61. MRPL53_1 MRPL53_1 83 0.955 - - - - 0.955 - - - -
62. MMP23B ENSDARG00000043079 1 0.955 - - - - 0.955 - - - - matrix metallopeptidase 23B [Source:HGNC Symbol;Acc:HGNC:7171]
63. spg20a 8 0.955 - - - - 0.955 - - - - spastic paraplegia 20a (Troyer syndrome), transcript variant X1
64. RYR3 ENSDARG00000071331 1 0.955 - - - - 0.955 - - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
65. BX005328.1 ENSDARG00000116896 1 0.955 - - - - 0.955 - - - - transmembrane protein 233-like [Source:NCBI gene;Acc:101885033]
66. BIN3 ENSDARG00000099651 5 0.955 - - - - 0.955 - - - - bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
67. PROC PROC 11 0.955 - - - - 0.955 - - - -
68. veph veph 3 0.955 - - - - 0.955 - - - -
69. zgc:154040 16 0.955 - - - - 0.955 - - - - zgc:154040
70. UBXN11 ENSDARG00000053828 22 0.955 - - - - 0.955 - - - - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
71. ugt5d1 ENSDARG00000002394 5 0.955 - - - - 0.955 - - - - UDP glucuronosyltransferase 5 family, polypeptide D1 [Source:ZFIN;Acc:ZDB-GENE-091118-36]
72. si:ch211-203b20.4 ENSDARG00000091790 3 0.955 - - - - 0.955 - - - - si:ch211-203b20.4 [Source:ZFIN;Acc:ZDB-GENE-060503-208]
73. CR936371.2 ENSDARG00000117302 2 0.955 - - - - 0.955 - - - -
74. CABZ01070631.1 ENSDARG00000110183 6 0.955 - - - - 0.955 - - - - F-BAR and double SH3 domains protein 2-like [Source:NCBI gene;Acc:100537850]
75. aicda ENSDARG00000015734 3 0.951 - - - - 0.951 - - - - activation-induced cytidine deaminase [Source:ZFIN;Acc:ZDB-GENE-041122-2]
76. SCCPDH SCCPDH 29 0.949 - - - - 0.949 - - - -
77. dpysl5a ENSDARG00000011141 1827 0.948 - 0.948 - - - - - - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
78. TUBB8P7 TUBB8P7 1353 0.947 - 0.947 - - - - - - -
79. si:ch211-240g9.1 36 0.946 - 0.946 - - - - - - - si:ch211-240g9.1
80. zgc:153031 ENSDARG00000068876 73 0.946 - 0.946 - - - - - - - zgc:153031 [Source:ZFIN;Acc:ZDB-GENE-060929-1190]
81. CU302326.3 CU302326.3 6 0.946 - 0.946 - - - - - - -
82. znf652 ENSDARG00000062302 17 0.946 - 0.946 - - - - - - - zinc finger protein 652 [Source:ZFIN;Acc:ZDB-GENE-030131-5857]
83. si:ch211-106n13.3 ENSDARG00000052633 3 0.946 - 0.946 - - - - - - - si:ch211-106n13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9088]
84. lrrc4.1 ENSDARG00000069402 323 0.946 - 0.946 - - - - - - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
85. lrrc24 ENSDARG00000101704 224 0.946 - 0.946 - - - - - - - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
86. foxb1a ENSDARG00000089042 101 0.946 - 0.946 - - - - - - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
87. SLC9B1 SLC9B1 137 0.946 - 0.946 - - - - - - -
88. si:ch73-239k17.1 si:ch73-239k17.1 44 0.946 - 0.946 - - - - - - -
89. rd3 ENSDARG00000031600 1085 0.946 - 0.946 - - - - - - - retinal degeneration 3, GUCY2D regulator [Source:ZFIN;Acc:ZDB-GENE-040724-103]
90. ptprc ENSDARG00000071437 104 0.946 - 0.946 - - - - - - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
91. ENSDARG00000091642 ENSDARG00000091642 14 0.946 - 0.946 - - - - - - -
92. unc5da ENSDARG00000092722 8 0.946 - 0.946 - - - - - - - unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE-080908-2]
93. bicc2 ENSDARG00000076557 77 0.946 - 0.946 - - - - - - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
94. fem1a ENSDARG00000067966 11 0.946 - 0.946 - - - - - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
95. diaph2 ENSDARG00000076060 26 0.946 - 0.946 - - - - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
96. si:dkeyp-77h1.4 ENSDARG00000058248 54 0.946 - 0.946 - - - - - - - si:dkeyp-77h1.4 [Source:ZFIN;Acc:ZDB-GENE-050208-18]
97. pla2g4a pla2g4a 7 0.946 - 0.946 - - - - - - -
98. BAI1_1 BAI1_1 57 0.946 - 0.946 - - - - - - -
99. VWA3A ENSDARG00000087210 1 0.946 - 0.946 - - - - - - - von Willebrand factor A domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-131121-527]
100. GRAMD1B_1 GRAMD1B_1 10 0.945 - - - - 0.945 - - - -

There are 879 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA