Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arhgap4b

Gene Name Gene ID Reads Annotation
arhgap4b ENSDARG00000015003 451 Rho GTPase activating protein 4b [Source:ZFIN;Acc:ZDB-GENE-090311-38]










Genes with expression patterns similar to arhgap4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgap4b ENSDARG00000015003 451 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rho GTPase activating protein 4b [Source:ZFIN;Acc:ZDB-GENE-090311-38]
2. JPH3 ENSDARG00000102204 283 1.763 0.943 0.820 - - - - - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
3. ifi35 ENSDARG00000075643 62 1.739 0.810 0.929 - - - - - - - interferon-induced protein 35 [Source:ZFIN;Acc:ZDB-GENE-100311-2]
4. zgc:91811 zgc:91811 186 1.644 0.769 0.875 - - - - - - -
5. marveld3 ENSDARG00000099654 113 1.638 - 0.901 - - - - 0.737 - - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
6. odf2 odf2 460 1.625 - 0.818 - - 0.807 - - - -
7. GJD2 GJD2 1351 1.576 0.768 0.808 - - - - - - -
8. RDM1 RDM1 28 1.55 - 0.774 - - - - - 0.776 -
9. pde10a ENSDARG00000003449 60 1.549 - 0.792 - - - - - 0.757 - phosphodiesterase 10A [Source:ZFIN;Acc:ZDB-GENE-040426-1115]
10. pax6a ENSDARG00000103379 3061 1.537 0.757 0.780 - - - - - - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
11. nrarpb ENSDARG00000018958 6225 1.535 0.740 0.795 - - - - - - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
12. gpr144 gpr144 479 1.516 0.717 0.799 - - - - - - -
13. CU467854.2 CU467854.2 298 1.502 - 0.782 - - 0.720 - - - -
14. ENDOD1_5 ENDOD1_5 8723 1.499 0.770 0.729 - - - - - - -
15. ildr1b ENSDARG00000040910 169 1.496 - - - - - - 0.763 0.733 - immunoglobulin-like domain containing receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040912-72]
16. cth ENSDARG00000074301 3860 1.492 - 0.711 - - - 0.781 - - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
17. SLC29A2 ENSDARG00000001767, ENSDARG00000115816 1392 1.482 0.763 0.719 - - - - - - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
18. fam60al 2846 1.454 0.751 - - - - 0.703 - - - family with sequence similarity 60, member A, like
19. NPAS3 ENSDARG00000109820 362 1.452 0.725 - - - 0.727 - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
20. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.435 0.722 0.713 - - - - - - - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
21. skap1 ENSDARG00000001498, ENSDARG00000114047 55 1.434 - - - - 0.711 - 0.723 - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
22. si:ch211-102c2.4 ENSDARG00000079387 101 1.433 0.724 0.709 - - - - - - - si:ch211-102c2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8862]
23. SGSM1 SGSM1 254 1.417 0.714 - - - - 0.703 - - -
24. kifap3b ENSDARG00000006862 613 0.942 - 0.942 - - - - - - - kinesin-associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2219]
25. KCNA1 KCNA1 268 0.94 - 0.940 - - - - - - -
26. prdm13 ENSDARG00000078701 205 0.934 0.934 - - - - - - - - PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
27. pcp4a ENSDARG00000053130 1024 0.914 0.914 - - - - - - - - Purkinje cell protein 4a [Source:ZFIN;Acc:ZDB-GENE-031118-105]
28. exd2 ENSDARG00000016117 342 0.913 - 0.913 - - - - - - - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
29. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 0.912 - 0.912 - - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
30. negr1 ENSDARG00000021607 1051 0.911 0.911 - - - - - - - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
31. vsnl1a ENSDARG00000023228 1584 0.911 0.911 - - - - - - - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
32. RAB33A ENSDARG00000057394, ENSDARG00000115279 380 0.91 0.910 - - - - - - - - RAB33A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-283]
33. slc17a6b ENSDARG00000041150 823 0.907 0.907 - - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
34. tmcc2 ENSDARG00000046007 148 0.903 - 0.903 - - - - - - - transmembrane and coiled-coil domain family 2 [Source:ZFIN;Acc:ZDB-GENE-091202-2]
35. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 0.903 0.903 - - - - - - - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
36. smad3b ENSDARG00000010207 951 0.897 - 0.897 - - - - - - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
37. scube2 ENSDARG00000037362 2833 0.896 0.896 - - - - - - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
38. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 0.891 0.891 - - - - - - - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
39. alkbh8 ENSDARG00000060256 102 0.889 - 0.889 - - - - - - - alkB homolog 8, tRNA methyltransferase [Source:ZFIN;Acc:ZDB-GENE-100922-251]
40. PPP2R5B ENSDARG00000054931 213 0.889 0.889 - - - - - - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
41. scrt2 ENSDARG00000056175 4331 0.887 0.887 - - - - - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
42. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 0.886 0.886 - - - - - - - - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
43. nxt2 ENSDARG00000061527, ENSDARG00000113656 277 0.884 - 0.884 - - - - - - - nuclear transport factor 2-like export factor 2 [Source:ZFIN;Acc:ZDB-GENE-050521-1]
44. cdkn2d ENSDARG00000094176 190 0.884 - 0.884 - - - - - - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
45. plekhm1 ENSDARG00000099954, ENSDARG00000114703 545 0.883 - - - - - - 0.883 - - pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2752]
46. lpcat1 ENSDARG00000011506 263 0.881 - - - - - - 0.881 - - lysophosphatidylcholine acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-915]
47. gfap ENSDARG00000025301 5584 0.881 0.881 - - - - - - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
48. Mar-09 Mar-09 126 0.88 0.880 - - - - - - - -
49. unc13c 197 0.879 0.879 - - - - - - - - unc-13 homolog C (C. elegans)
50. MAPK8IP1_1 MAPK8IP1_1 186 0.875 0.875 - - - - - - - -
51. si:dkey-187a12.4 127 0.873 - 0.873 - - - - - - - si:dkey-187a12.4
52. prkag2 prkag2 355 0.871 0.871 - - - - - - - -
53. BX088646.1 BX088646.1 34 0.87 - 0.870 - - - - - - -
54. mamdc1 mamdc1 156 0.87 - 0.870 - - - - - - -
55. GTPBP8 ENSDARG00000075033 231 0.868 - 0.868 - - - - - - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
56. ctnnd2b ENSDARG00000003779 964 0.868 0.868 - - - - - - - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
57. lbx1b ENSDARG00000018611 399 0.868 0.868 - - - - - - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
58. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 0.868 0.868 - - - - - - - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
59. capn1b ENSDARG00000052748, ENSDARG00000117045 320 0.867 0.867 - - - - - - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
60. CT030046.1 CT030046.1 190 0.865 0.865 - - - - - - - -
61. mapk12b ENSDARG00000006409 2246 0.865 0.865 - - - - - - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
62. lrriq1 ENSDARG00000093781 83 0.865 - 0.865 - - - - - - - leucine-rich repeats and IQ motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-235]
63. prr14 ENSDARG00000089232 495 0.865 - 0.865 - - - - - - - proline rich 14 [Source:ZFIN;Acc:ZDB-GENE-030131-3785]
64. FAM126B 588 0.865 0.865 - - - - - - - - family with sequence similarity 126 member B
65. csf1b ENSDARG00000068263 248 0.864 0.864 - - - - - - - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
66. magixb ENSDARG00000077633 74 0.863 - - - - - - 0.863 - - MAGI family member, X-linked b [Source:ZFIN;Acc:ZDB-GENE-081105-33]
67. asb2a asb2a 845 0.862 - 0.862 - - - - - - -
68. bhlhe22 ENSDARG00000058039 1673 0.861 0.861 - - - - - - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
69. pdlim5a ENSDARG00000101777 357 0.861 - 0.861 - - - - - - - PDZ and LIM domain 5a [Source:ZFIN;Acc:ZDB-GENE-040718-401]
70. si:dkey-227h16.2 si:dkey-227h16.2 98 0.86 - 0.860 - - - - - - -
71. AL935046.1 AL935046.1 89 0.859 - 0.859 - - - - - - -
72. azi1 azi1 507 0.858 - 0.858 - - - - - - -
73. vamp1 ENSDARG00000031283 3094 0.857 0.857 - - - - - - - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
74. UBE2QL1 ENSDARG00000079276 3474 0.857 0.857 - - - - - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
75. UNCX ENSDARG00000102976 847 0.856 - 0.856 - - - - - - - UNC homeobox [Source:ZFIN;Acc:ZDB-GENE-080509-1]
76. lgi1a ENSDARG00000020493 1218 0.855 - 0.855 - - - - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
77. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 0.854 0.854 - - - - - - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
78. nbn ENSDARG00000040303 43 0.854 - 0.854 - - - - - - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
79. CABZ01064972.1 ENSDARG00000098966 199 0.854 - 0.854 - - - - - - - uncharacterized LOC100538212 [Source:NCBI gene;Acc:100538212]
80. rdh12 ENSDARG00000018069 396 0.854 - 0.854 - - - - - - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
81. wu:fd60c08 wu:fd60c08 35 0.854 - 0.854 - - - - - - -
82. clvs2 ENSDARG00000053122 1390 0.854 0.854 - - - - - - - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
83. gpm6bb ENSDARG00000001676 2005 0.853 0.853 - - - - - - - - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
84. SIPA1 SIPA1 302 0.852 - 0.852 - - - - - - -
85. six4a ENSDARG00000004695 413 0.852 - 0.852 - - - - - - - SIX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-010201-2]
86. reep2 ENSDARG00000031382, ENSDARG00000112622 563 0.852 0.852 - - - - - - - - receptor accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-125]
87. si:dkey-26g8.10 si:dkey-26g8.10 100 0.851 - 0.851 - - - - - - -
88. ikzf1 ENSDARG00000013539 94 0.85 - 0.850 - - - - - - - IKAROS family zinc finger 1 (Ikaros) [Source:ZFIN;Acc:ZDB-GENE-980526-304]
89. cspg5a ENSDARG00000069981 1699 0.847 0.847 - - - - - - - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
90. nbeaa ENSDARG00000070080 862 0.847 0.847 - - - - - - - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
91. plekhg7 ENSDARG00000062855 308 0.847 - 0.847 - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
92. ATP8B4 ENSDARG00000079453 147 0.846 - 0.846 - - - - - - - ATPase phospholipid transporting 8B4 [Source:ZFIN;Acc:ZDB-GENE-121116-7]
93. proza ENSDARG00000037783, ENSDARG00000116864 500 0.846 - 0.846 - - - - - - - protein Z, vitamin K-dependent plasma glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-061013-403]
94. syt2a ENSDARG00000025206 681 0.845 0.845 - - - - - - - - synaptotagmin IIa [Source:ZFIN;Acc:ZDB-GENE-060503-315]
95. her2 ENSDARG00000038205 3219 0.845 0.845 - - - - - - - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
96. ddx11 ENSDARG00000011072 325 0.843 - 0.843 - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Source:ZFIN;Acc:ZDB-GENE-041114-191]
97. arhgap35 254 0.843 - 0.843 - - - - - - - Rho GTPase activating protein 35b, transcript variant X2
98. SLITRK5 SLITRK5 122 0.842 0.842 - - - - - - - -
99. lmo2 ENSDARG00000095019 1098 0.842 - 0.842 - - - - - - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
100. atp6v0a2a ENSDARG00000035538 278 0.841 0.841 - - - - - - - - ATPase H+ transporting V0 subunit a2a [Source:ZFIN;Acc:ZDB-GENE-091113-4]

There are 762 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA