Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arhgap29b

Gene Name Gene ID Reads Annotation
arhgap29b ENSDARG00000017748 812 Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]










Genes with expression patterns similar to arhgap29b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arhgap29b ENSDARG00000017748 812 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
2. CABZ01003826.1_1 CABZ01003826.1_1 1154 2.805 - - 0.958 - 0.974 0.873 - - -
3. ehmt2 ENSDARG00000102325 984 2.493 - 0.791 - - 0.923 - 0.779 - - euchromatic histone-lysine N-methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-010501-6]
4. CCDC64B CCDC64B 337 2.41 0.776 - - - - 0.927 - 0.707 -
5. smurf2 ENSDARG00000038067 2057 1.938 - - - - 0.981 0.957 - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
6. C3H16orf58 C3H16orf58 487 1.898 - - 0.963 - - 0.935 - - -
7. smg7 ENSDARG00000060767 2759 1.898 - - - - 0.952 0.946 - - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
8. GPSM3 GPSM3 257 1.873 - - 0.982 - - - 0.891 - -
9. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 1.866 - - 0.983 - - - 0.883 - - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
10. TATDN3 ENSDARG00000044072 914 1.848 - 0.866 0.982 - - - - - - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
11. si:ch73-173m3.3 si:ch73-173m3.3 425 1.844 - - 0.960 - - 0.884 - - -
12. lrrfip2 ENSDARG00000010400 2633 1.837 - - 0.849 - 0.988 - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
13. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 1.837 - - 0.892 - - 0.945 - - - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
14. SCARF2 1117 1.82 - - 0.929 - - 0.891 - - - scavenger receptor class F, member 2
15. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.814 0.848 - - - - 0.966 - - - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
16. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.811 - - 0.838 - 0.973 - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
17. tuft1b ENSDARG00000071010 909 1.81 - - - - 0.974 0.836 - - - tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
18. TRIP10 TRIP10 1079 1.797 - - 0.939 - - 0.858 - - -
19. Metazoa_SRP_8 Metazoa_SRP_8 153 1.789 - 0.810 0.979 - - - - - -
20. ccnb1 ENSDARG00000051923 3226 1.78 - - - - 0.980 0.800 - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
21. tnks tnks 1695 1.779 - - 0.813 - 0.966 - - - -
22. arpc4 ENSDARG00000054063 6150 1.777 - - - - 0.889 0.888 - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
23. RECQL4 ENSDARG00000077516 462 1.768 - 0.834 - - - 0.934 - - - RecQ helicase-like 4 [Source:ZFIN;Acc:ZDB-GENE-091112-2]
24. wif1 ENSDARG00000005541 1689 1.762 - - 0.795 - 0.967 - - - - wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
25. uba3 ENSDARG00000057987, ENSDARG00000116639 1181 1.752 - - 0.895 - - 0.857 - - - ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]
26. rbm17 ENSDARG00000031346 2079 1.751 - - - - 0.967 0.784 - - - RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]
27. samm50l ENSDARG00000039681 2465 1.747 - - - - 0.962 0.785 - - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
28. commd8 ENSDARG00000028201 1318 1.744 - - - - 0.987 0.757 - - - COMM domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-061103-124]
29. rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 1.743 - - - - 0.983 - 0.760 - - ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]
30. src ENSDARG00000008107 3643 1.742 - - 0.892 - 0.850 - - - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
31. rhogd ENSDARG00000030608, ENSDARG00000112157 599 1.742 - - - - - 0.919 0.823 - - ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
32. prkar1aa ENSDARG00000076128 6565 1.74 - - 0.944 - - 0.796 - - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
33. brd8 ENSDARG00000025071 2605 1.734 - - - - 0.938 0.796 - - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
34. CU856359.1 CU856359.1 517 1.733 - - - - - 0.953 0.780 - -
35. si:zfos-364h11.1 99 1.73 - - - - - 0.934 0.796 - - si:zfos-364h11.1, transcript variant X4
36. si:dkey-169i5.4 ENSDARG00000077862 511 1.73 - - - - - 0.862 0.868 - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
37. fosb ENSDARG00000055751 170 1.723 - - - - - 0.923 0.800 - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
38. C24H8orf44 C24H8orf44 405 1.71 0.752 - - - - 0.958 - - -
39. gpr143 ENSDARG00000034572 559 1.707 - 0.759 - - - 0.948 - - - G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
40. dusp11 ENSDARG00000038156 2490 1.705 - - - - 0.970 - 0.735 - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
41. tacc3 ENSDARG00000005454 2305 1.704 - - 0.805 - - 0.899 - - - transforming, acidic coiled-coil containing protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-327]
42. rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 1.699 0.840 - - - - 0.859 - - - RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]
43. KIF1A KIF1A 1686 1.699 - - - - 0.969 0.730 - - -
44. zgc:158614 zgc:158614 312 1.697 - 0.774 - - - 0.923 - - -
45. itsn1 ENSDARG00000000086 684 1.682 - - - - - 0.945 0.737 - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
46. trpm7 ENSDARG00000036232 925 1.677 - - 0.950 - - 0.727 - - - transient receptor potential cation channel, subfamily M, member 7 [Source:ZFIN;Acc:ZDB-GENE-021115-2]
47. sra1 ENSDARG00000053619 2799 1.677 - - 0.770 - - 0.907 - - - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
48. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 1.675 - - - - - 0.957 0.718 - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
49. si:ch211-150o23.2 ENSDARG00000092746 788 1.673 - - - - - 0.888 - 0.785 - si:ch211-150o23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-386]
50. vamp8 ENSDARG00000024116, ENSDARG00000114304 2747 1.666 - - 0.842 - - 0.824 - - - vesicle-associated membrane protein 8 (endobrevin) [Source:ZFIN;Acc:ZDB-GENE-030131-5215]
51. dpysl3 ENSDARG00000002587 4381 1.666 - - 0.730 - 0.936 - - - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
52. C12H10orf118 C12H10orf118 964 1.665 0.885 - - - - 0.780 - - -
53. slc47a1 ENSDARG00000046012 1426 1.665 0.802 - 0.863 - - - - - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
54. C13H4orf32 C13H4orf32 174 1.664 0.733 - - - - 0.931 - - -
55. mdm4 ENSDARG00000057513 1954 1.661 - - 0.854 - - 0.807 - - - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
56. lama5 ENSDARG00000058543 2782 1.656 - - 0.938 - - 0.718 - - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
57. myh14 ENSDARG00000073732 502 1.653 0.721 - - - - 0.932 - - - myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1]
58. slc25a42 ENSDARG00000099368 2420 1.649 - - 0.856 - - 0.793 - - - solute carrier family 25, member 42 [Source:ZFIN;Acc:ZDB-GENE-060825-313]
59. nufip2 ENSDARG00000069066 3965 1.649 - - 0.873 - - 0.776 - - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
60. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.646 - - 0.795 - - 0.851 - - - transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
61. dusp7 ENSDARG00000101413 1307 1.64 - - - - - 0.809 0.831 - - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
62. gemin5 ENSDARG00000079257 152 1.634 - 0.774 - - - - 0.860 - - gem (nuclear organelle) associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-031112-9]
63. zmpste24 ENSDARG00000044090, ENSDARG00000115387 3873 1.634 - - 0.725 - 0.909 - - - - zinc metallopeptidase, STE24 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-6312]
64. zgc:194839 ENSDARG00000078550 4003 1.633 - - 0.898 - - 0.735 - - - zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
65. ctdp1 ENSDARG00000017522 731 1.632 0.751 - 0.881 - - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040720-1]
66. tmem214 ENSDARG00000016968 3772 1.631 - - 0.884 - - - 0.747 - - transmembrane protein 214 [Source:ZFIN;Acc:ZDB-GENE-110307-2]
67. nkap ENSDARG00000033450, ENSDARG00000116152 1929 1.631 - - 0.860 - - 0.771 - - - NFKB activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-8064]
68. unc93a ENSDARG00000041554 427 1.63 - - - - - 0.889 0.741 - - unc-93 homolog A [Source:ZFIN;Acc:ZDB-GENE-041014-304]
69. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 1.626 - - - - - 0.919 0.707 - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
70. golgb1 ENSDARG00000061951 2023 1.625 - - 0.848 - - - 0.777 - - golgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
71. vimp 4034 1.621 - - 0.703 - - 0.918 - - - VCP-interacting membrane selenoprotein
72. brd1b ENSDARG00000051798 1712 1.618 0.702 - - - - 0.916 - - - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
73. si:dkeyp-100a1.6 ENSDARG00000092141 33 1.616 - 0.806 - - - - 0.810 - - si:dkeyp-100a1.6 [Source:ZFIN;Acc:ZDB-GENE-081104-448]
74. smtla ENSDARG00000038191 42 1.615 - 0.792 - - - - 0.823 - - somatolactin alpha [Source:ZFIN;Acc:ZDB-GENE-060123-2]
75. sh3rf1 ENSDARG00000070470 1463 1.608 - - - - - 0.898 0.710 - - SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
76. zgc:136895 zgc:136895 41 1.607 0.787 0.820 - - - - - - -
77. cyb5r2 ENSDARG00000051925 304 1.603 0.736 0.867 - - - - - - - cytochrome b5 reductase 2 [Source:ZFIN;Acc:ZDB-GENE-060825-83]
78. swt1 ENSDARG00000094010 472 1.598 - 0.761 - - - - 0.837 - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
79. pdf ENSDARG00000013950 293 1.595 - - - - - - 0.811 0.784 - peptide deformylase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050913-42]
80. col14a1a ENSDARG00000005762 4778 1.595 - - 0.855 - 0.740 - - - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
81. med31 ENSDARG00000008020 4161 1.585 - - 0.851 - - 0.734 - - - mediator complex subunit 31 [Source:ZFIN;Acc:ZDB-GENE-040718-114]
82. rab11al ENSDARG00000014340 2116 1.58 - - 0.814 - - 0.766 - - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
83. si:ch211-241j12.3 ENSDARG00000043963 128 1.56 0.768 - - - - - 0.792 - - si:ch211-241j12.3 [Source:ZFIN;Acc:ZDB-GENE-040724-72]
84. pop5 ENSDARG00000053452 1347 1.553 0.746 - - - - 0.807 - - - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
85. clptm1 ENSDARG00000018973, ENSDARG00000109534, ENSDARG00000114443 2439 1.547 - - 0.750 - - 0.797 - - - cleft lip and palate associated transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-265]
86. dpp3 ENSDARG00000020676 2393 1.546 - - 0.817 - - 0.729 - - - dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
87. F7 ENSDARG00000034862 121 1.54 0.816 0.724 - - - - - - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
88. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 1.53 - - 0.776 - - 0.754 - - - polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
89. SPDEF ENSDARG00000029930 60 1.528 0.741 0.787 - - - - - - - SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
90. mrpl3 ENSDARG00000103318 2308 1.527 - - 0.797 - - 0.730 - - - mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
91. dbnlb ENSDARG00000016016 1412 1.51 0.772 - - - - 0.738 - - - drebrin-like b [Source:ZFIN;Acc:ZDB-GENE-050522-293]
92. g2e3 ENSDARG00000001313 1485 1.507 0.709 - - - - 0.798 - - - G2/M-phase specific E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-400]
93. gpr39 ENSDARG00000102888 46 1.49 - 0.787 - - - - 0.703 - - G protein-coupled receptor 39 [Source:ZFIN;Acc:ZDB-GENE-040426-1395]
94. nfkbiz ENSDARG00000102097 218 1.472 0.752 - - - - - 0.720 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta [Source:ZFIN;Acc:ZDB-GENE-071024-1]
95. ppp1r13bb ENSDARG00000009142 1175 1.463 - 0.754 - - - 0.709 - - - protein phosphatase 1, regulatory subunit 13Bb [Source:ZFIN;Acc:ZDB-GENE-030131-4327]
96. syne2a 63 1.46 0.734 0.726 - - - - - - - spectrin repeat containing, nuclear envelope 2a
97. tbl1xr1b ENSDARG00000008966 2203 1.456 - - 0.747 - - 0.709 - - - transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
98. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.444 - 0.731 - - - - 0.713 - - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
99. zgc:162183 ENSDARG00000074663, ENSDARG00000116229 403 1.433 - 0.730 - - - 0.703 - - - zgc:162183 [Source:ZFIN;Acc:ZDB-GENE-070410-30]
100. tmem135 ENSDARG00000069157 918 0.991 - - - - 0.991 - - - - transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]

There are 2004 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA