Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for arfip1

Gene Name Gene ID Reads Annotation
arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]










Genes with expression patterns similar to arfip1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
2. ranbp9 ENSDARG00000061048 2687 2.464 - 0.757 - - 0.939 - - - 0.768 RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
3. umps ENSDARG00000012215 4564 2.454 - 0.836 - - - - 0.726 - 0.892 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
4. tjp2a ENSDARG00000063309 1947 2.375 0.722 0.789 - - - 0.864 - - - tight junction protein 2a (zona occludens 2) [Source:ZFIN;Acc:ZDB-GENE-070925-2]
5. hgs ENSDARG00000020960 3574 2.369 - - - - 0.931 - 0.702 - 0.736 hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
6. bre bre 1233 2.307 - 0.754 - - - - 0.708 - 0.845
7. hdac4 ENSDARG00000098349 1370 2.272 - - - - - 0.745 0.706 - 0.821 histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
8. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 2.18 - 0.731 - - - 0.749 0.700 - - synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
9. tpcn1 ENSDARG00000062362 563 1.864 - - - - 0.951 - - - 0.913 two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
10. nol8 ENSDARG00000044143 425 1.847 - - - - 0.949 - - - 0.898 nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
11. ikbkb ENSDARG00000079123 498 1.843 - - - - 0.956 - - - 0.887 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
12. cdan1 ENSDARG00000042261 658 1.831 - - - - 0.941 - - - 0.890 codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
13. samm50l ENSDARG00000039681 2465 1.824 - - - - 0.911 - - - 0.913 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
14. wif1 ENSDARG00000005541 1689 1.823 - - - - 0.961 - - - 0.862 wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
15. eya3 ENSDARG00000036100 1965 1.778 - - - - 0.908 - - - 0.870 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
16. pcdh18a ENSDARG00000089805 1096 1.732 - - - - 0.949 - - - 0.783 protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
17. mcrs1 ENSDARG00000020840 3232 1.73 - - - - 0.941 - - - 0.789 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
18. mier1a ENSDARG00000041072 1690 1.727 - - - - 0.910 - - - 0.817 mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
19. snx5 ENSDARG00000020442 2463 1.722 - - - - 0.952 - - - 0.770 sorting nexin 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2857]
20. sirt2 ENSDARG00000011488 5389 1.719 - - - - 0.941 - 0.778 - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
21. KIF1A KIF1A 1686 1.711 - - - - 0.937 - - - 0.774
22. PACS1 PACS1 2061 1.703 0.760 - - - 0.943 - - - -
23. aatkb ENSDARG00000104442 392 1.699 - - - - 0.950 - - 0.749 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
24. ARID3A ENSDARG00000070843 1613 1.698 - - - - - - 0.794 - 0.904 AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
25. actn1 ENSDARG00000007219 2919 1.694 - 0.862 - - - 0.832 - - - actinin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081113-4]
26. setd8a 2549 1.694 - 0.749 - - 0.945 - - - - SET domain containing (lysine methyltransferase) 8a
27. minpp1a ENSDARG00000057058, ENSDARG00000110567, ENSDARG00000116432 496 1.693 - - - - 0.949 - 0.744 - - multiple inositol-polyphosphate phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-060929-1194]
28. sap30l ENSDARG00000030213 5795 1.693 - - - - 0.923 - - 0.770 - sap30-like [Source:ZFIN;Acc:ZDB-GENE-030131-5287]
29. dhrs13a.2 ENSDARG00000111240 491 1.683 0.794 - - - - - - - 0.889 dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
30. ttc1 ENSDARG00000044567 1141 1.682 - 0.805 - - - - - - 0.877 tetratricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-041114-80]
31. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.68 - 0.735 - - 0.945 - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
32. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 1.677 - - - - 0.911 - - - 0.766 eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
33. unc5b ENSDARG00000033327 3432 1.669 - 0.742 - - 0.927 - - - - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
34. tmem135 ENSDARG00000069157 918 1.668 - 0.719 - - 0.949 - - - - transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]
35. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.667 - 0.746 - - 0.921 - - - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
36. lysmd2 ENSDARG00000091771, ENSDARG00000112692 1102 1.667 - 0.722 - - 0.945 - - - - LysM, putative peptidoglycan-binding, domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040801-250]
37. gdi1 ENSDARG00000056122 4106 1.66 - 0.790 - - - - - - 0.870 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
38. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.657 - - - - 0.844 - - - 0.813 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
39. gstal gstal 1865 1.656 - 0.783 - - - - - - 0.873
40. flot2a ENSDARG00000004830 5276 1.651 - - - - 0.902 - 0.749 - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
41. commd8 ENSDARG00000028201 1318 1.649 - - - - 0.936 0.713 - - - COMM domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-061103-124]
42. CEP152 ENSDARG00000075725 391 1.647 0.747 - - - - - - - 0.900 centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
43. slc6a6a ENSDARG00000012534 183 1.647 - - - - - - - 0.751 0.896 solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
44. arpc4 ENSDARG00000054063 6150 1.645 - - - - 0.868 0.777 - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
45. vcp ENSDARG00000020008, ENSDARG00000116074 2284 1.645 - - - - - - - 0.740 0.905 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
46. btbd10b ENSDARG00000020252 7251 1.644 - - - - 0.938 0.706 - - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
47. mboat2a ENSDARG00000031845 1255 1.642 - 0.715 - - 0.927 - - - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
48. hmga2 ENSDARG00000069912 20402 1.642 - - - - 0.904 - 0.738 - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
49. ncoa6 ENSDARG00000071272 759 1.64 - - - - - - - 0.740 0.900 nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
50. pus7 ENSDARG00000031774 195 1.64 - - - - - - - 0.761 0.879 pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
51. RLIM ENSDARG00000079306 514 1.638 - 0.735 - - - - - - 0.903 ring finger protein, LIM domain interacting [Source:ZFIN;Acc:ZDB-GENE-120809-2]
52. lum ENSDARG00000045580 5395 1.637 - - - - - 0.822 0.815 - - lumican [Source:ZFIN;Acc:ZDB-GENE-040625-24]
53. tm9sf4 ENSDARG00000002536 1684 1.637 - 0.745 - - - - - - 0.892 transmembrane 9 superfamily protein member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1575]
54. DLC1 ENSDARG00000079317 2149 1.635 - - - - - - 0.743 - 0.892 DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
55. wu:fj05h12 wu:fj05h12 6166 1.629 - - - - 0.907 0.722 - - -
56. RBM12B ENSDARG00000079717 541 1.625 - - - - - - - 0.729 0.896 RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
57. PARL 2511 1.623 - - - - - - 0.763 - 0.860 presenilin associated rhomboid like
58. aftpha ENSDARG00000069249 867 1.614 - 0.742 - - - - - - 0.872 aftiphilin a [Source:ZFIN;Acc:ZDB-GENE-030131-1437]
59. cpvl ENSDARG00000056480 2115 1.612 - - - - - - 0.738 - 0.874 carboxypeptidase, vitellogenic-like [Source:ZFIN;Acc:ZDB-GENE-031219-2]
60. xrcc6bp1 662 1.611 - - - - - - - 0.707 0.904 XRCC6 binding protein 1
61. fuca1 fuca1 6176 1.604 - - - - - 0.893 - 0.711 -
62. itgb4 ENSDARG00000028507 2568 1.6 - - - - - 0.850 0.750 - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
63. wfdc1 ENSDARG00000058003 850 1.598 - - - - - - 0.729 - 0.869 WAP four-disulfide core domain 1 [Source:ZFIN;Acc:ZDB-GENE-070112-352]
64. spryd7a ENSDARG00000052624 1059 1.597 - 0.752 - - - - - - 0.845 SPRY domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-040426-2713]
65. sdc4 ENSDARG00000059906 10105 1.597 - - - - 0.850 - 0.747 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
66. palm1b ENSDARG00000007818 2128 1.594 - - - - - - 0.770 - 0.824 paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
67. sptlc2b ENSDARG00000074287 1853 1.594 - - - - - - 0.761 - 0.833 serine palmitoyltransferase, long chain base subunit 2b [Source:ZFIN;Acc:ZDB-GENE-080305-8]
68. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.592 - 0.815 - - - - - - 0.777 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
69. CU571336.1 ENSDARG00000099892 2164 1.59 - - - - - - - 0.774 0.816
70. si:dkey-95p16.2 ENSDARG00000093484 3413 1.588 - 0.779 - - 0.809 - - - - si:dkey-95p16.2 [Source:ZFIN;Acc:ZDB-GENE-081105-65]
71. slc44a2 ENSDARG00000037059 1903 1.584 - - - - - 0.841 0.743 - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
72. ezrb ENSDARG00000025091 2861 1.582 - - - - - 0.719 - - 0.863 ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
73. FRG1 ENSDARG00000056504 1196 1.58 - 0.749 - - - - - - 0.831 FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
74. nadl1.2 695 1.578 - - - - - - - 0.712 0.866 neural adhesion molecule L1.2, transcript variant X1
75. tra2a ENSDARG00000007863 4449 1.576 - - - - - - 0.747 - 0.829 transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
76. EIF1B ENSDARG00000029445 5034 1.575 - - - - - - 0.726 - 0.849 eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
77. FBXL3 FBXL3 1769 1.575 - - - - - - 0.722 - 0.853
78. sri ENSDARG00000058593 13152 1.571 - - - - 0.753 0.818 - - - sorcin [Source:ZFIN;Acc:ZDB-GENE-040426-1356]
79. agpat4 ENSDARG00000069044 4487 1.569 - - - - 0.821 - 0.748 - - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
80. bhlhe40 ENSDARG00000004060 2107 1.566 - - - - - 0.825 0.741 - - basic helix-loop-helix family, member e40 [Source:ZFIN;Acc:ZDB-GENE-030131-3133]
81. oclna ENSDARG00000005108 3280 1.562 - 0.823 - - - 0.739 - - - occludin a [Source:ZFIN;Acc:ZDB-GENE-040426-2685]
82. rac1 rac1 7341 1.561 - 0.828 - - - - 0.733 - -
83. SPIN4_1 SPIN4_1 2562 1.554 - 0.734 - - - - - - 0.820
84. nos1apa ENSDARG00000078725, ENSDARG00000105071 3815 1.554 - 0.738 - - - - 0.816 - - nitric oxide synthase 1 (neuronal) adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-081024-1]
85. atp2b1a ENSDARG00000012684 4673 1.551 - 0.795 - - - - 0.756 - - ATPase plasma membrane Ca2+ transporting 1a [Source:ZFIN;Acc:ZDB-GENE-030925-29]
86. ch1073-291c23.1 2426 1.55 - - - - - 0.725 0.825 - - ch1073-291c23.1, transcript variant X6
87. pfkfb4l pfkfb4l 2539 1.548 - - - - - - 0.712 - 0.836
88. synj2bp ENSDARG00000028321 1143 1.548 - 0.828 - - - - 0.720 - - synaptojanin 2 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6531]
89. sesn3 ENSDARG00000015822 5328 1.546 - - - - - - 0.724 - 0.822 sestrin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2924]
90. AIM1L AIM1L 899 1.546 - 0.841 - - - 0.705 - - -
91. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.543 - 0.703 - - - - - - 0.840 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
92. cicb ENSDARG00000055502 1356 1.54 - - - - - 0.783 0.757 - - capicua transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-030131-1966]
93. stom ENSDARG00000003835, ENSDARG00000109478, ENSDARG00000109779 5514 1.537 - 0.731 - - - - 0.806 - - stomatin [Source:ZFIN;Acc:ZDB-GENE-980526-486]
94. POR POR 973 1.531 - 0.813 - - - - 0.718 - -
95. pbx2 ENSDARG00000019717 6892 1.526 - - - - 0.820 - - - 0.706 pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
96. cnn3a ENSDARG00000099510 6063 1.524 - 0.724 - - - - 0.800 - - calponin 3, acidic a [Source:ZFIN;Acc:ZDB-GENE-030131-5130]
97. col12a1a ENSDARG00000078322 1833 1.521 - - - - - - 0.708 - 0.813 collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
98. si:ch211-161h7.4 ENSDARG00000087238 4399 1.52 - - - - 0.815 - 0.705 - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
99. serinc2 ENSDARG00000056532 1406 1.519 - - - - - 0.790 0.729 - - serine incorporator 2 [Source:ZFIN;Acc:ZDB-GENE-041111-296]
100. bckdk ENSDARG00000016904 3775 1.518 - - - - - 0.718 0.800 - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]

There are 1590 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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