Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for arfgef1

Gene Name Gene ID Reads Annotation
arfgef1 ENSDARG00000063474 1131 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-030131-108]










Genes with expression patterns similar to arfgef1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arfgef1 ENSDARG00000063474 1131 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-030131-108]
2. MIS12 ENSDARG00000026454 649 1.57 - - - - - 0.816 0.754 - - MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
3. CDH8 172 1.56 - - - - - 0.825 0.735 - - cadherin 8
4. si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 1.558 - 0.794 - - - - 0.764 - - si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]
5. si:ch211-212g7.6 ENSDARG00000079369 707 1.549 - 0.745 - - - 0.804 - - - si:ch211-212g7.6 [Source:ZFIN;Acc:ZDB-GENE-030131-4695]
6. e2f8 ENSDARG00000057323 1432 1.546 - 0.842 - - - 0.704 - - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
7. ptgs2a ENSDARG00000004539 1207 1.542 - 0.795 - - - 0.747 - - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
8. yipf5 ENSDARG00000007279 2334 1.533 - 0.815 - - - 0.718 - - - Yip1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1057]
9. irs1 ENSDARG00000054087 1809 1.532 - 0.787 - - - - 0.745 - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
10. arhgap11a ENSDARG00000100019 1642 1.522 - 0.711 - - - 0.811 - - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
11. smarcc1a ENSDARG00000017397 2957 1.519 - - - - - 0.751 0.768 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
12. rangap1a ENSDARG00000041317 1456 1.513 - - - - - 0.719 0.794 - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
13. C21H5orf15 C21H5orf15 2318 1.51 0.790 0.720 - - - - - - -
14. ubtf ENSDARG00000035066 4070 1.489 - 0.736 - - - 0.753 - - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
15. cand1 ENSDARG00000017841 8164 1.471 - - - - - 0.721 0.750 - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
16. snx29 ENSDARG00000077317 239 1.469 - - - - - 0.734 0.735 - - sorting nexin 29 [Source:ZFIN;Acc:ZDB-GENE-121105-13]
17. smad7 ENSDARG00000016858 1660 1.468 - 0.765 - - - 0.703 - - - SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
18. btr30 ENSDARG00000102591 506 1.465 - 0.735 - - - - 0.730 - - bloodthirsty-related gene family, member 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1407]
19. ca16b ENSDARG00000060123 389 1.46 - 0.706 - - - 0.754 - - - carbonic anhydrase XVI b [Source:ZFIN;Acc:ZDB-GENE-080818-1]
20. coro7 ENSDARG00000089616 2141 1.423 - 0.722 - - - - 0.701 - - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
21. NRBP2 NRBP2 127 1.415 - 0.709 - - - 0.706 - - -
22. rhbdd2 ENSDARG00000092463 937 0.932 - - - - - - 0.932 - - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
23. vps39 ENSDARG00000074471 684 0.93 - 0.930 - - - - - - - vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
24. alpi.1 ENSDARG00000015273 1712 0.918 - 0.918 - - - - - - - alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
25. tmem2 2572 0.915 - - - - - 0.915 - - - transmembrane protein 2, transcript variant X1
26. sec24c ENSDARG00000103516 1575 0.914 - - - - - - 0.914 - - SEC24 homolog C, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-4487]
27. ebag9 ENSDARG00000040021 2217 0.898 - - - - - 0.898 - - - estrogen receptor binding site associated, antigen, 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1093]
28. phldb1a ENSDARG00000061093 1637 0.896 - - - - - 0.896 - - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
29. arid1ab ENSDARG00000101891 1722 0.894 - - - - - 0.894 - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
30. NAIF1_1 NAIF1_1 1336 0.893 - 0.893 - - - - - - -
31. CR387996.1 ENSDARG00000097774 3037 0.883 - - - - - 0.883 - - -
32. ddx42 ENSDARG00000037928 1659 0.88 - - - - - 0.880 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
33. srsf1b ENSDARG00000017843 2760 0.877 - - - - - 0.877 - - - serine/arginine-rich splicing factor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1467]
34. sf1 ENSDARG00000008188 5142 0.875 - - - - - 0.875 - - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
35. wipi1 ENSDARG00000040657 2732 0.874 - 0.874 - - - - - - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
36. stox2a ENSDARG00000070162 1620 0.871 - - - - - 0.871 - - - storkhead box 2a [Source:ZFIN;Acc:ZDB-GENE-090313-101]
37. sall4 ENSDARG00000044485 1694 0.867 - - - - - 0.867 - - - spalt-like transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-060328-2]
38. ISM2 ISM2 1710 0.866 - - - - - 0.866 - - -
39. BX294110.1 ENSDARG00000096875 1761 0.866 - - - - - 0.866 - - -
40. ruvbl1 ENSDARG00000002591 2381 0.866 - - - - - 0.866 - - - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
41. spg11 ENSDARG00000045968 542 0.866 - - - - - 0.866 - - - spastic paraplegia 11 [Source:ZFIN;Acc:ZDB-GENE-101017-1]
42. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 0.865 - 0.865 - - - - - - - tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
43. rbks ENSDARG00000019877 126 0.863 - - - - - - 0.863 - - ribokinase [Source:ZFIN;Acc:ZDB-GENE-040625-112]
44. spg21 ENSDARG00000007760 409 0.863 - - - - - - 0.863 - - spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:ZFIN;Acc:ZDB-GENE-040426-2722]
45. GID4 ENSDARG00000079482 1375 0.862 - 0.862 - - - - - - - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
46. usp1 ENSDARG00000056414 1816 0.862 - - - - - 0.862 - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
47. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.862 - - - - - - 0.862 - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
48. ypel1 ENSDARG00000035630, ENSDARG00000112717 739 0.861 - - - - - 0.861 - - - yippee-like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-41]
49. CEP350 ENSDARG00000058000 2887 0.859 - 0.859 - - - - - - - centrosomal protein 350 [Source:ZFIN;Acc:ZDB-GENE-030131-6975]
50. ppp3ccb ENSDARG00000057456, ENSDARG00000116250 6265 0.858 - - - - - - 0.858 - - protein phosphatase 3, catalytic subunit, gamma isozyme, b [Source:ZFIN;Acc:ZDB-GENE-070112-1102]
51. si:ch211-241n15.1 si:ch211-241n15.1 632 0.857 - - - - - - 0.857 - -
52. palm1b ENSDARG00000007818 2128 0.857 - - - - - 0.857 - - - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
53. dcaf12 ENSDARG00000063155 697 0.857 - - - - - 0.857 - - - DDB1 and CUL4 associated factor 12 [Source:ZFIN;Acc:ZDB-GENE-061013-363]
54. ppib ENSDARG00000092798 21969 0.854 - 0.854 - - - - - - - peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
55. ap2s1 ENSDARG00000026967 18613 0.854 - - - - - 0.854 - - - adaptor related protein complex 2 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2174]
56. sepw2a 8597 0.853 - - - - - 0.853 - - - selenoprotein W, 2a
57. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 0.853 - - - - - 0.853 - - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
58. gps2 ENSDARG00000035558, ENSDARG00000113597 1233 0.852 - - - - - 0.852 - - - G protein pathway suppressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1176]
59. vps18 ENSDARG00000070433 320 0.852 - - - - - - 0.852 - - vacuolar protein sorting 18 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020419-33]
60. clasrp ENSDARG00000061742, ENSDARG00000116329 1650 0.851 - - - - - 0.851 - - - CLK4-associating serine/arginine rich protein [Source:ZFIN;Acc:ZDB-GENE-060503-837]
61. SORCS2 ENSDARG00000077465 185 0.851 - - - - - 0.851 - - - sortilin-related VPS10 domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-130530-825]
62. TEX264 TEX264 283 0.849 - - - - - 0.849 - - -
63. zmat5 ENSDARG00000035434 983 0.848 - - - - - - 0.848 - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
64. MAN2A2 ENSDARG00000063101 922 0.848 - - - - - 0.848 - - - mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
65. epcam ENSDARG00000040534, ENSDARG00000110073 3322 0.847 - 0.847 - - - - - - - epithelial cell adhesion molecule [Source:ZFIN;Acc:ZDB-GENE-040426-2209]
66. psmd1 ENSDARG00000003189 4373 0.846 - - - - - - 0.846 - - proteasome 26S subunit, non-ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-810]
67. loh12cr1 loh12cr1 346 0.846 - - - - - 0.846 - - -
68. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 0.846 - 0.846 - - - - - - - insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
69. rgl3a ENSDARG00000071213 350 0.845 - - - - - - 0.845 - - ral guanine nucleotide dissociation stimulator-like 3a [Source:ZFIN;Acc:ZDB-GENE-101130-1]
70. ZC3H12A_1 ZC3H12A_1 558 0.844 - 0.844 - - - - - - -
71. TMEM185A TMEM185A 5505 0.843 - - - - - 0.843 - - -
72. CDCA4 ENSDARG00000042319 7918 0.843 - - - - - 0.843 - - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
73. BDP1_1 BDP1_1 317 0.843 - - - - - 0.843 - - -
74. qki2 ENSDARG00000010018 2230 0.842 - - - - - 0.842 - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
75. CABZ01062452.1 CABZ01062452.1 1721 0.841 - 0.841 - - - - - - -
76. bmpr2a ENSDARG00000011941 2972 0.841 - - - - - 0.841 - - - bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
77. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 0.839 - - - - - - 0.839 - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
78. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 0.839 - 0.839 - - - - - - - Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
79. polr2j ENSDARG00000035146 1493 0.839 - - - - - 0.839 - - - polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
80. si:ch211-120p12.3 1079 0.839 - 0.839 - - - - - - - si:ch211-120p12.3, transcript variant X2
81. pskh1 ENSDARG00000056713, ENSDARG00000115380, ENSDARG00000115957 574 0.838 - - - - - 0.838 - - - protein serine kinase H1 [Source:ZFIN;Acc:ZDB-GENE-050119-1]
82. etv5b ENSDARG00000044511, ENSDARG00000113744 1967 0.838 - 0.838 - - - - - - - ets variant 5b [Source:ZFIN;Acc:ZDB-GENE-991228-4]
83. ccdc6a ENSDARG00000043334, ENSDARG00000112924 1774 0.837 - - - - - 0.837 - - - coiled-coil domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-7848]
84. rcc1 ENSDARG00000037158 1165 0.837 - - - - - - 0.837 - - regulator of chromosome condensation 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2216]
85. cyp2ad6 ENSDARG00000042956 59 0.836 - - - - - - 0.836 - - cytochrome P450, family 2, subfamily AD, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-041001-157]
86. nedd4l ENSDARG00000060006 1669 0.836 - - - - - 0.836 - - - neural precursor cell expressed, developmentally down-regulated 4-like [Source:ZFIN;Acc:ZDB-GENE-051118-2]
87. rmnd5b ENSDARG00000043359 3054 0.836 - - - - - 0.836 - - - required for meiotic nuclear division 5 homolog B [Source:ZFIN;Acc:ZDB-GENE-040426-1744]
88. mapk4 ENSDARG00000017681, ENSDARG00000110581 303 0.835 - - - - - - 0.835 - - mitogen-activated protein kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2835]
89. dnpep ENSDARG00000022599, ENSDARG00000111999 913 0.835 - - - - - 0.835 - - - aspartyl aminopeptidase [Source:ZFIN;Acc:ZDB-GENE-040426-852]
90. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 0.835 - - - - - 0.835 - - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
91. flrt3 ENSDARG00000076895 3516 0.834 - - - - - 0.834 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
92. UNKL ENSDARG00000037838 1086 0.834 - - - - - 0.834 - - - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
93. ube2g2 ENSDARG00000025404 1774 0.834 - 0.834 - - - - - - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
94. MAP4_1 MAP4_1 1153 0.834 - - - - - - 0.834 - -
95. kmt2e ENSDARG00000007523 1851 0.833 - 0.833 - - - - - - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
96. si:dkey-258f14.2 ENSDARG00000094874 297 0.833 - - - - - - 0.833 - - si:dkey-258f14.2 [Source:ZFIN;Acc:ZDB-GENE-081104-395]
97. hspa5 ENSDARG00000103846 4661 0.832 - 0.832 - - - - - - - heat shock protein 5 [Source:ZFIN;Acc:ZDB-GENE-031001-11]
98. exoc5 ENSDARG00000060323 2450 0.832 - - - - - 0.832 - - - exocyst complex component 5 [Source:ZFIN;Acc:ZDB-GENE-080204-126]
99. lrrfip2 ENSDARG00000010400 2633 0.831 - 0.831 - - - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
100. ZDHHC3 ZDHHC3 1208 0.831 - - - - - - 0.831 - -

There are 1260 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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