Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for arfgap3

Gene Name Gene ID Reads Annotation
arfgap3 ENSDARG00000097583 1087 ADP-ribosylation factor GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1]










Genes with expression patterns similar to arfgap3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arfgap3 ENSDARG00000097583 1087 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ADP-ribosylation factor GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1]
2. socs3a ENSDARG00000025428 349 1.8 - 0.823 - - - - 0.977 - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
3. zgc:63691 zgc:63691 180 1.728 - 0.750 - - - - 0.978 - -
4. znf687a ENSDARG00000102774 393 1.724 - 0.745 - - - - 0.979 - - zinc finger protein 687a [Source:ZFIN;Acc:ZDB-GENE-100922-32]
5. reps1 ENSDARG00000002877 962 1.722 - - - - - - 0.981 - 0.741 RALBP1 associated Eps domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9536]
6. etnk1 ENSDARG00000019420 2166 1.715 - - - - - - 0.913 0.802 - ethanolamine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030328-21]
7. asb3 ENSDARG00000005246 317 1.711 - 0.734 - - - - 0.977 - - ankyrin repeat and SOCS box containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6142]
8. TAF2 ENSDARG00000102307 1401 1.688 - 0.760 - - - - 0.928 - - TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
9. sc:d173 sc:d173 1279 1.687 - - - - - - 0.928 - 0.759
10. znf385a ENSDARG00000009899 3433 1.683 0.786 - - - - - 0.897 - - zinc finger protein 385A [Source:ZFIN;Acc:ZDB-GENE-090313-255]
11. col6a1 ENSDARG00000074908 2339 1.671 - - - - - 0.752 0.919 - - collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
12. zgc:92380 ENSDARG00000041339 1867 1.656 - - - - - - 0.912 - 0.744 zgc:92380 [Source:ZFIN;Acc:ZDB-GENE-040801-221]
13. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 1.653 - 0.739 - - - - 0.914 - - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
14. sp9 ENSDARG00000099374 2266 1.623 - - - - 0.732 - 0.891 - - sp9 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2313]
15. gpx8 ENSDARG00000013302 1427 1.612 - 0.786 - - - 0.826 - - - glutathione peroxidase 8 (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-965]
16. itsn2b ENSDARG00000054973, ENSDARG00000110296 1255 1.593 - 0.811 - - - 0.782 - - - intersectin 2b [Source:ZFIN;Acc:ZDB-GENE-050309-102]
17. lysmd3 ENSDARG00000024693 754 1.582 - 0.787 - - - - - 0.795 - LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
18. acsl3a ENSDARG00000032079 897 1.526 - - - - - - 0.730 - 0.796 acyl-CoA synthetase long chain family member 3a [Source:ZFIN;Acc:ZDB-GENE-050420-181]
19. sox5 ENSDARG00000011582 3632 1.515 0.764 - - - - 0.751 - - - SRY (sex determining region Y)-box 5 [Source:ZFIN;Acc:ZDB-GENE-000607-13]
20. SLC6A16 SLC6A16 630 1.51 0.714 0.796 - - - - - - -
21. wfdc2 ENSDARG00000089187 653 1.5 0.772 - - - - - - - 0.728 WAP four-disulfide core domain 2 [Source:ZFIN;Acc:ZDB-GENE-090313-47]
22. lamb2l ENSDARG00000033950 952 1.492 - 0.703 - - - - - - 0.789 laminin, beta 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-4205]
23. col4a4 ENSDARG00000002831 803 1.47 - - - - 0.702 - - - 0.768 collagen, type IV, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-101001-1]
24. CABZ01113191.1 CABZ01113191.1 388 1.447 0.726 0.721 - - - - - - -
25. PMF1 PMF1 1172 1.446 - - - - - 0.728 - 0.718 -
26. si:ch211-89f7.1 si:ch211-89f7.1 699 1.428 - 0.705 - - - - - - 0.723
27. smim14 ENSDARG00000005799, ENSDARG00000110934 1094 1.411 - - 0.710 - - 0.701 - - - small integral membrane protein 14 [Source:ZFIN;Acc:ZDB-GENE-040426-22]
28. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 0.99 - - - - - - 0.990 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
29. gbas gbas 735 0.987 - - - - - - 0.987 - -
30. laptm4a ENSDARG00000006397 1698 0.985 - - - - - - 0.985 - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
31. kif2c ENSDARG00000076228 2281 0.985 - - - - - - 0.985 - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
32. pes ENSDARG00000018902 3286 0.985 - - - - - - 0.985 - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
33. DUSP23_1 DUSP23_1 1085 0.984 - - - - - - 0.984 - -
34. sigmar1 ENSDARG00000011418 1240 0.984 - - - - - - 0.984 - - sigma non-opioid intracellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1006]
35. dhdds ENSDARG00000039851 1135 0.984 - - - - - - 0.984 - - dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
36. asb12a ENSDARG00000017086, ENSDARG00000110715 4230 0.984 - - - - - - 0.984 - - ankyrin repeat and SOCS box-containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-1647]
37. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 0.983 - - - - - - 0.983 - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
38. gli1 ENSDARG00000101244 534 0.983 - - - - - - 0.983 - - GLI family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-030321-1]
39. cops8 ENSDARG00000024846, ENSDARG00000115974 3053 0.983 - - - - - - 0.983 - - COP9 signalosome subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-982]
40. ttc1 ENSDARG00000044567 1141 0.983 - - - - - - 0.983 - - tetratricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-041114-80]
41. timm10b ENSDARG00000043898 1233 0.983 - - - - - - 0.983 - - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
42. mob2b ENSDARG00000012005 395 0.982 - - - - - - 0.982 - - MOB kinase activator 2b [Source:ZFIN;Acc:ZDB-GENE-060616-319]
43. acn9 acn9 520 0.982 - - - - - - 0.982 - -
44. dnajb9a ENSDARG00000052072 578 0.981 - - - - - - 0.981 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
45. Mar-07 Mar-07 2926 0.981 - - - - - - 0.981 - -
46. plekhh1 ENSDARG00000053835 2123 0.981 - - - - - - 0.981 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
47. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 0.981 - - - - - - 0.981 - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
48. CAPN5 CAPN5 357 0.981 - - - - - - 0.981 - -
49. igfbp3 ENSDARG00000099144 269 0.981 - - - - - - 0.981 - - insulin-like growth factor binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040412-1]
50. PTS ENSDARG00000045269 2185 0.981 - - - - - - 0.981 - - 6-pyruvoyltetrahydropterin synthase [Source:ZFIN;Acc:ZDB-GENE-070615-3]
51. yy1b ENSDARG00000027978 2669 0.98 - - - - - - 0.980 - - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
52. prdm5 ENSDARG00000006288 472 0.98 - - - - - - 0.980 - - PR domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040708-1]
53. clk2a ENSDARG00000062954 1890 0.98 - - - - - - 0.980 - - CDC-like kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-298]
54. nelfa ENSDARG00000061411, ENSDARG00000116904 581 0.98 - - - - - - 0.980 - - negative elongation factor complex member A [Source:ZFIN;Acc:ZDB-GENE-030131-6400]
55. tmem203 ENSDARG00000104996 1182 0.98 - - - - - - 0.980 - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
56. papolg ENSDARG00000012141 1445 0.98 - - - - - - 0.980 - - poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
57. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 0.98 - - - - - - 0.980 - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
58. esyt3 ENSDARG00000006422 335 0.98 - - - - - - 0.980 - - extended synaptotagmin-like protein 3 [Source:ZFIN;Acc:ZDB-GENE-050809-35]
59. mrps7 ENSDARG00000101622 889 0.98 - - - - - - 0.980 - - mitochondrial ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-050809-112]
60. si:ch73-108h4.3 si:ch73-108h4.3 193 0.979 - - - - - - 0.979 - -
61. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 0.979 - - - - - - 0.979 - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
62. dnm1l ENSDARG00000015006 1729 0.979 - - - - - - 0.979 - - dynamin 1-like [Source:ZFIN;Acc:ZDB-GENE-040426-1556]
63. kbtbd7 ENSDARG00000078001 367 0.979 - - - - - - 0.979 - - kelch repeat and BTB (POZ) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-204]
64. dhodh ENSDARG00000051889 401 0.979 - - - - - - 0.979 - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
65. PRKD3 ENSDARG00000079967 192 0.979 - - - - - - 0.979 - - protein kinase D3 [Source:ZFIN;Acc:ZDB-GENE-130530-880]
66. ZFYVE1 ENSDARG00000078652 631 0.979 - - - - - - 0.979 - - zinc finger, FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-131205-1]
67. baz2a ENSDARG00000102974 266 0.978 - - - - - - 0.978 - - bromodomain adjacent to zinc finger domain, 2A [Source:ZFIN;Acc:ZDB-GENE-041010-202]
68. ICT1 356 0.978 - - - - - - 0.978 - - immature colon carcinoma transcript 1
69. mpdu1b ENSDARG00000040265 1968 0.978 - - - - - - 0.978 - - mannose-P-dolichol utilization defect 1b [Source:ZFIN;Acc:ZDB-GENE-040625-135]
70. armc1l ENSDARG00000020887 1219 0.978 - - - - - - 0.978 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
71. zgc:153372 ENSDARG00000068967 358 0.978 - - - - - - 0.978 - - zgc:153372 [Source:ZFIN;Acc:ZDB-GENE-060929-680]
72. DHRS2 DHRS2 585 0.978 - - - - - - 0.978 - -
73. PDZD8 ENSDARG00000088699 844 0.978 - - - - - - 0.978 - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
74. cndp2 ENSDARG00000003931 1177 0.978 - - - - - - 0.978 - - carnosine dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5499]
75. agk ENSDARG00000009837, ENSDARG00000113514 811 0.978 - - - - - - 0.978 - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
76. unk ENSDARG00000000935 353 0.978 - - - - - - 0.978 - - unkempt family zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-707]
77. plxna4 ENSDARG00000019328 782 0.978 - - - - - - 0.978 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
78. si:ch211-241o7.5 si:ch211-241o7.5 1387 0.978 - - - - - - 0.978 - -
79. TMEM184B TMEM184B 1280 0.978 - - - - - - 0.978 - -
80. pld1a ENSDARG00000056228 765 0.978 - - - - - - 0.978 - - phospholipase D1a [Source:ZFIN;Acc:ZDB-GENE-031002-2]
81. zgc:136763 zgc:136763 190 0.977 - - - - - - 0.977 - -
82. VPS37C ENSDARG00000031836 906 0.977 - - - - - - 0.977 - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
83. asb6 ENSDARG00000007125 389 0.977 - - - - - - 0.977 - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
84. bin2b ENSDARG00000010255 2649 0.977 - - - - - - 0.977 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
85. zdhhc5a ENSDARG00000016263 625 0.977 - - - - - - 0.977 - - zinc finger, DHHC-type containing 5a [Source:ZFIN;Acc:ZDB-GENE-090312-92]
86. SLITRK6 ENSDARG00000098769 217 0.977 - - - - - - 0.977 - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
87. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.977 - - - - - - 0.977 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
88. CABZ01078889.1 CABZ01078889.1 911 0.977 - - - - - - 0.977 - -
89. COL13A1 1565 0.977 - - - - - - 0.977 - - collagen, type XIII, alpha 1, transcript variant X1
90. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 0.977 - - - - - - 0.977 - - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
91. ERRFI1 ERRFI1 664 0.977 - - - - - - 0.977 - -
92. BX324179.3 BX324179.3 326 0.977 - - - - - - 0.977 - -
93. PSD PSD 367 0.977 - - - - - - 0.977 - -
94. CABZ01068263.1 CABZ01068263.1 712 0.977 - - - - - - 0.977 - -
95. lppr4a lppr4a 141 0.977 - - - - - - 0.977 - -
96. zgc:173962 zgc:173962 67 0.977 - - - - - - 0.977 - -
97. cux1b ENSDARG00000043134 641 0.977 - - - - - - 0.977 - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
98. PRR5 PRR5 630 0.977 - - - - - - 0.977 - -
99. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.977 - - - - - - 0.977 - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
100. tmem181 ENSDARG00000045910 2288 0.977 - - - - - - 0.977 - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]

There are 1133 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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