Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for arf4a

Gene Name Gene ID Reads Annotation
arf4a ENSDARG00000045989, ENSDARG00000103858 2545 ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]










Genes with expression patterns similar to arf4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
2. cln6a ENSDARG00000077584 1090 2.633 - - 0.985 - - - - 0.743 0.905 CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
3. clcn3 ENSDARG00000003269, ENSDARG00000110064 2961 2.499 0.752 - - - - 0.999 - 0.748 - chloride channel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1699]
4. COL4A3BP COL4A3BP 3288 2.497 - - 0.719 - - 0.996 0.782 - -
5. derl1 ENSDARG00000021905 4698 2.258 0.764 - - - - - 0.722 0.772 - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
6. cenpf ENSDARG00000055133 5267 1.965 - - 0.968 - - 0.997 - - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
7. nr2f6a ENSDARG00000003607 4779 1.921 - 0.931 - - - 0.990 - - - nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
8. ak3 ENSDARG00000058226 3160 1.92 - 0.926 - - - 0.994 - - - adenylate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2142]
9. ptpn13 ENSDARG00000103699 2866 1.908 - 0.939 0.969 - - - - - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
10. sec24d ENSDARG00000045946 2395 1.87 - 0.902 0.968 - - - - - - SEC24 homolog D, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-070117-2501]
11. pdia5 ENSDARG00000069242 3576 1.866 - 0.942 0.924 - - - - - - protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
12. dpp7 ENSDARG00000027750, ENSDARG00000112154, ENSDARG00000115933 2341 1.864 - 0.897 0.967 - - - - - - dipeptidyl-peptidase 7 [Source:ZFIN;Acc:ZDB-GENE-050306-16]
13. rhpn2 ENSDARG00000014577 2537 1.855 - - - - - 0.986 - 0.869 - rhophilin, Rho GTPase binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9927]
14. gfer ENSDARG00000070061 1119 1.854 - 0.936 0.918 - - - - - - growth factor, augmenter of liver regeneration (ERV1 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060810-186]
15. agr2 ENSDARG00000070480 5143 1.852 - 0.888 - - - 0.964 - - - anterior gradient 2 [Source:ZFIN;Acc:ZDB-GENE-050417-214]
16. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.85 - 0.948 0.902 - - - - - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
17. gga3 ENSDARG00000103667 675 1.849 - - 0.988 - - - - - 0.861 ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
18. wdhd1 ENSDARG00000015998 775 1.844 - - 0.982 0.862 - - - - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
19. eva1ba ENSDARG00000102701 1480 1.836 - - 0.972 - - - - - 0.864 eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
20. CR548630.1 CR548630.1 3301 1.83 - - 0.966 0.864 - - - - -
21. cecr1a 836 1.829 - - - - - 0.999 - - 0.830 cat eye syndrome chromosome region, candidate 1a
22. si:dkeyp-104h9.5 ENSDARG00000073801 722 1.812 - - 0.983 - - - - - 0.829 si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
23. zfp36l1b ENSDARG00000021443 2974 1.806 - - - - - 0.997 0.809 - - zinc finger protein 36, C3H type-like 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2391]
24. adm2a ENSDARG00000045708, ENSDARG00000111740 246 1.806 - 0.938 - - - - - - 0.868 adrenomedullin 2a [Source:ZFIN;Acc:ZDB-GENE-041210-100]
25. tdg tdg 3269 1.801 - - 0.946 0.855 - - - - -
26. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.798 - - 0.930 0.868 - - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
27. sdpra sdpra 4594 1.787 0.801 - - - - 0.986 - - -
28. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 1.784 - - - - - 0.999 - - 0.785 family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
29. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 1.781 - - 0.988 0.793 - - - - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
30. supt20 ENSDARG00000078658 713 1.781 - 0.935 - 0.846 - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
31. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.771 - 0.945 - 0.826 - - - - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
32. rcn1 ENSDARG00000070006 8455 1.77 - 0.882 - - - - - - 0.888 reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
33. sgce ENSDARG00000012138 912 1.766 - 0.935 - 0.831 - - - - - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
34. pdcd10b ENSDARG00000012591 3395 1.759 - 0.980 - 0.779 - - - - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
35. pld1b ENSDARG00000057125 325 1.74 - - 0.987 - - - - 0.753 - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
36. vrk1 ENSDARG00000018006 1759 1.74 - - 0.968 0.772 - - - - - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
37. rhogc ENSDARG00000028401 2671 1.739 - - 0.986 0.753 - - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
38. hsdl2 ENSDARG00000002523 2746 1.735 - - - - - 0.996 0.739 - - hydroxysteroid dehydrogenase like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1066]
39. prrc1 ENSDARG00000044304 1567 1.729 - 0.918 - - - - - 0.811 - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
40. TMEM185A TMEM185A 5505 1.728 - - 0.954 0.774 - - - - -
41. inip ENSDARG00000028523 1925 1.728 - - 0.989 0.739 - - - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
42. C19H1orf85 C19H1orf85 1587 1.726 - 0.946 - 0.780 - - - - -
43. hoxc11a ENSDARG00000070351 1783 1.723 - - - - - 0.999 0.724 - - homeobox C11a [Source:ZFIN;Acc:ZDB-GENE-990415-111]
44. marveld2a ENSDARG00000025076 917 1.722 - 0.938 - - - - - - 0.784 MARVEL domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050411-59]
45. h1m ENSDARG00000102892 319 1.72 - - - - - 0.999 0.721 - - linker histone H1M [Source:ZFIN;Acc:ZDB-GENE-030131-5614]
46. tjp1a ENSDARG00000077506 2658 1.719 - - 0.972 - - - 0.747 - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
47. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.716 - - 0.977 0.739 - - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
48. ube2h ENSDARG00000000019 9900 1.714 - - - - - 0.963 0.751 - - ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
49. CU928070.1 CU928070.1 1152 1.713 - 0.933 - - - - - 0.780 -
50. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.713 - - 0.966 0.747 - - - - - KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
51. CABZ01076275.1 ENSDARG00000100753 5137 1.711 - - 0.963 - - 0.748 - - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
52. SLC12A6 SLC12A6 883 1.709 - 0.941 - - - - 0.768 - -
53. smad4 smad4 2519 1.709 - - 0.986 - - - 0.723 - -
54. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.708 - 0.938 0.770 - - - - - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
55. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.707 - - 0.974 0.733 - - - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
56. sart3 ENSDARG00000008032 2594 1.706 - 0.928 - 0.778 - - - - - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
57. si:dkey-256i11.1 si:dkey-256i11.1 3373 1.705 - - 0.946 0.759 - - - - -
58. f2rl1.2 ENSDARG00000077540 822 1.703 - - 0.988 - - - - - 0.715 coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
59. sdc4 ENSDARG00000059906 10105 1.7 - - - - - 0.958 0.742 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
60. aldh2.1 ENSDARG00000089924 2883 1.699 0.753 0.946 - - - - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1262]
61. tmem248 ENSDARG00000018825 1560 1.697 - - 0.986 - - - 0.711 - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
62. CT573103.1 ENSDARG00000097550 950 1.694 - - 0.980 - - - - - 0.714
63. ptp4a2 ptp4a2 3196 1.683 - 0.954 - - - - 0.729 - -
64. ttc3 ENSDARG00000086075 2157 1.682 - 0.935 - - - - 0.747 - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
65. CU633775.1 ENSDARG00000113543 319 1.673 - - - 0.817 - - - - 0.856
66. AL929434.1 AL929434.1 3294 1.666 0.731 0.935 - - - - - - -
67. helz ENSDARG00000030560 3259 1.666 - 0.928 - 0.738 - - - - - helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
68. hsd17b7 ENSDARG00000088140 185 1.662 - - - - - - - 0.810 0.852 hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
69. wasb ENSDARG00000026350 139 1.662 - - - 0.851 - - - 0.811 - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
70. STARD7 ENSDARG00000074858 889 1.661 - 0.933 - - - - 0.728 - - StAR-related lipid transfer (START) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-2310]
71. zgc:101858 ENSDARG00000035129 1393 1.661 - 0.954 - 0.707 - - - - - zgc:101858 [Source:ZFIN;Acc:ZDB-GENE-040927-13]
72. loxl2b ENSDARG00000044074 1919 1.661 - - - - - - - 0.884 0.777 lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
73. ptplb ptplb 6135 1.66 - - 0.905 - - - 0.755 - -
74. FP236813.1 FP236813.1 1842 1.658 - 0.932 - - - - 0.726 - -
75. atp6v1h ENSDARG00000006370 7028 1.653 - 0.741 0.912 - - - - - - ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
76. FBXL3 FBXL3 1769 1.652 - - - 0.836 - - 0.816 - -
77. gyltl1b 1368 1.645 - 0.928 - 0.717 - - - - - glycosyltransferase-like 1b, transcript variant X3
78. rap1b ENSDARG00000008867 7915 1.642 - 0.746 - - - 0.896 - - - RAP1B, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9662]
79. fbxo28 ENSDARG00000027159 9602 1.641 - - 0.902 - - - - - 0.739 F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
80. dse ENSDARG00000017988 2169 1.633 - 0.921 - - - - 0.712 - - dermatan sulfate epimerase [Source:ZFIN;Acc:ZDB-GENE-041001-202]
81. aqp3a ENSDARG00000003808 9044 1.631 - - 0.893 - - - - 0.738 - aquaporin 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2826]
82. cul4b ENSDARG00000060510 6053 1.63 - 0.923 0.707 - - - - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
83. lbr ENSDARG00000014013 4835 1.626 - - 0.884 - - - 0.742 - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
84. clint1a ENSDARG00000025535 4965 1.626 - 0.919 - - - - - - 0.707 clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
85. soul2 ENSDARG00000039499 1469 1.622 - - - - - - 0.828 0.794 - heme-binding protein soul2 [Source:ZFIN;Acc:ZDB-GENE-030131-2524]
86. nek6 ENSDARG00000037963 316 1.62 - - - 0.828 - - - - 0.792 NIMA-related kinase 6 [Source:ZFIN;Acc:ZDB-GENE-040724-133]
87. wls ENSDARG00000009534 8719 1.617 - 0.861 - - - - 0.756 - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
88. dek ENSDARG00000070108 2262 1.615 - - 0.908 - - - - - 0.707 DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
89. pabpn1 ENSDARG00000045373 4876 1.607 - - 0.874 - - - 0.733 - - poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
90. slc1a4 ENSDARG00000000551 4298 1.607 - 0.907 - - - - 0.700 - - solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-030616-566]
91. hoxa13a ENSDARG00000100312 543 1.607 - - - - - - - 0.742 0.865 homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
92. aim1a 2981 1.603 - - - - - - 0.756 - 0.847 crystallin beta-gamma domain containing 1a, transcript variant X1
93. zic2b ENSDARG00000037178, ENSDARG00000112354 993 1.595 - - - 0.884 - - - - 0.711 zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
94. sh3kbp1 ENSDARG00000075853 2838 1.594 - - - 0.817 - - - - 0.777 SH3-domain kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-186]
95. purba ENSDARG00000068822 2537 1.582 - - - 0.701 - - - - 0.881 purine-rich element binding protein Ba [Source:ZFIN;Acc:ZDB-GENE-060531-100]
96. CR318593.1 CR318593.1 290 1.582 - - - - - - - 0.742 0.840
97. APOLD1_1 APOLD1_1 590 1.579 - - - - - - 0.789 - 0.790
98. ecm2 ENSDARG00000071549 1527 1.577 0.700 - - - - - - - 0.877 extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
99. ppig ENSDARG00000044431 3427 1.575 - - - 0.849 - - 0.726 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
100. si:ch73-387e10.3 si:ch73-387e10.3 517 1.572 - - - 0.818 - - - - 0.754

There are 1826 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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