Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arf3b

Gene Name Gene ID Reads Annotation
arf3b ENSDARG00000036998, ENSDARG00000112366 38 ADP-ribosylation factor 3b [Source:ZFIN;Acc:ZDB-GENE-030616-356]










Genes with expression patterns similar to arf3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arf3b ENSDARG00000036998, ENSDARG00000112366 38 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 ADP-ribosylation factor 3b [Source:ZFIN;Acc:ZDB-GENE-030616-356]
2. CR678040.1 CR678040.1 117 2.501 0.803 - 0.821 - - 0.877 - - -
3. wdr47b ENSDARG00000099757 93 1.86 0.877 - - - - 0.983 - - - WD repeat domain 47b [Source:ZFIN;Acc:ZDB-GENE-121114-10]
4. cspg5b ENSDARG00000099793 67 1.84 - - - - 0.868 0.972 - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
5. tlx2 ENSDARG00000011273 870 1.804 - 0.903 - - - 0.901 - - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
6. fgf11b ENSDARG00000043907 16 1.796 - 0.919 - - - 0.877 - - - fibroblast growth factor 11b [Source:ZFIN;Acc:ZDB-GENE-100316-2]
7. ENKD1 ENSDARG00000043550 44 1.778 - 0.919 - - 0.859 - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
8. abo ENSDARG00000019207 16 1.764 - 0.919 - 0.845 - - - - - ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-081104-23]
9. fam184a ENSDARG00000014081 93 1.764 - 0.821 - - - 0.943 - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
10. si:ch211-181p13.2 ENSDARG00000096484 94 1.753 - 0.753 - - - 1.000 - - - si:ch211-181p13.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9054]
11. nsmfa ENSDARG00000060025 70 1.743 0.755 - - - - 0.988 - - - NMDA receptor synaptonuclear signaling and neuronal migration factor a [Source:ZFIN;Acc:ZDB-GENE-091204-32]
12. upk1a ENSDARG00000021866 9 1.742 - 0.919 0.823 - - - - - - uroplakin 1a [Source:ZFIN;Acc:ZDB-GENE-060421-2603]
13. mapk9 ENSDARG00000077364 38 1.735 - 0.858 - - - 0.877 - - - mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
14. nrg2b ENSDARG00000086585 100 1.726 - 0.919 - - - 0.807 - - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
15. TP53BP2 TP53BP2 217 1.721 0.919 0.802 - - - - - - -
16. CR626874.1 ENSDARG00000100141 55 1.706 0.815 - 0.891 - - - - - -
17. TUB ENSDARG00000062165, ENSDARG00000111083 871 1.704 0.889 - - - - 0.815 - - - tubby bipartite transcription factor [Source:ZFIN;Acc:ZDB-GENE-121009-1]
18. si:dkey-18j14.4 si:dkey-18j14.4 60 1.702 0.824 0.878 - - - - - - -
19. SLC2A13 SLC2A13 74 1.68 - 0.902 - - 0.778 - - - -
20. zgc:171220 ENSDARG00000102959 164 1.661 - 0.919 0.742 - - - - - - zgc:171220 [Source:ZFIN;Acc:ZDB-GENE-071004-11]
21. lyrm5b ENSDARG00000045827 91 1.658 0.815 0.843 - - - - - - - LYR motif containing 5b [Source:ZFIN;Acc:ZDB-GENE-070424-20]
22. nlgn4a 102 1.656 0.825 - - - - 0.831 - - - neuroligin 4a, transcript variant X1
23. CT583625.2 ENSDARG00000094770 57 1.638 0.800 - - - 0.838 - - - - uncharacterized LOC108181196 [Source:NCBI gene;Acc:108181196]
24. btr16 ENSDARG00000028850 21 1.636 - 0.919 - - - 0.717 - - - bloodthirsty-related gene family, member 16 [Source:ZFIN;Acc:ZDB-GENE-060929-1066]
25. got1l1 ENSDARG00000053644 49 1.622 - 0.827 0.795 - - - - - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
26. ntf7 ntf7 72 1.615 - 0.896 - - 0.719 - - - -
27. KCNJ10 KCNJ10 62 1.609 0.835 - - - - 0.774 - - -
28. syt1a ENSDARG00000030614 542 1.602 - 0.900 - - - 0.702 - - - synaptotagmin Ia [Source:ZFIN;Acc:ZDB-GENE-040718-165]
29. elmod1 ENSDARG00000062056, ENSDARG00000113222 10 1.578 - - - 0.845 - 0.733 - - - ELMO/CED-12 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070112-262]
30. evlb ENSDARG00000099720 245 1.575 0.818 - - - - 0.757 - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
31. pkp2 ENSDARG00000023026 120 1.573 0.775 0.798 - - - - - - - plakophilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-167]
32. med16 ENSDARG00000040779, ENSDARG00000116309 939 1.568 0.846 - - - - 0.722 - - - mediator complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-090306-4]
33. KLHL3 ENSDARG00000056647, ENSDARG00000111715 181 1.566 - 0.832 - - 0.734 - - - - kelch-like family member 3 [Source:ZFIN;Acc:ZDB-GENE-120203-4]
34. fam83fb ENSDARG00000104188 79 1.56 0.772 - - - - 0.788 - - - family with sequence similarity 83, member Fb [Source:ZFIN;Acc:ZDB-GENE-041114-194]
35. CU234171.2 CU234171.2 86 1.538 0.775 - - - - 0.763 - - -
36. si:dkey-253d23.2 ENSDARG00000071589 143 1.536 0.832 - - - 0.704 - - - - si:dkey-253d23.2 [Source:ZFIN;Acc:ZDB-GENE-050208-410]
37. SMARCA4 ENSDARG00000104339 48 1.517 - - 0.798 - - 0.719 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
38. map3k10 ENSDARG00000055672 284 1.495 0.704 0.791 - - - - - - - mitogen-activated protein kinase kinase kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050419-112]
39. pcyt1ba ENSDARG00000058162 206 1 - - - - - 1.000 - - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
40. chrnb3b ENSDARG00000038508 7 1 - - - - - 1.000 - - - cholinergic receptor, nicotinic, beta 3b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-030102-4]
41. CR749741.2 CR749741.2 15 1 - - - - - 1.000 - - -
42. wu:fd58b11 wu:fd58b11 21 1 - - - - - 1.000 - - -
43. ptchd4 ENSDARG00000008249 17 1 - 1.000 - - - - - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
44. rpap2 ENSDARG00000038397 118 1 - - - - - 1.000 - - - RNA polymerase II associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-420]
45. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1 - - - - - 1.000 - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
46. zgc:171318 zgc:171318 42 1 - - - - - 1.000 - - -
47. CR759907.4 CR759907.4 14 1 - - - - - 1.000 - - -
48. PDZD4 ENSDARG00000090564 131 0.997 - - - - - 0.997 - - - PDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]
49. grik5 ENSDARG00000101449, ENSDARG00000111384 75 0.991 - - - - - 0.991 - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
50. prlh2 ENSDARG00000071735, ENSDARG00000110890 21 0.983 - - - - - 0.983 - - - prolactin releasing hormone 2 [Source:ZFIN;Acc:ZDB-GENE-091204-205]
51. si:ch211-89f22.1 si:ch211-89f22.1 11 0.981 - 0.981 - - - - - - -
52. efr3ba ENSDARG00000033516 19 0.981 - 0.981 - - - - - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
53. fam155a ENSDARG00000075858 91 0.981 - 0.981 - - - - - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
54. C25H12orf5 C25H12orf5 65 0.981 - 0.981 - - - - - - -
55. cgna ENSDARG00000055607 11 0.981 - 0.981 - - - - - - - cingulin a [Source:ZFIN;Acc:ZDB-GENE-100921-78]
56. tmem79a ENSDARG00000071250 48 0.981 - 0.981 - - - - - - - transmembrane protein 79a [Source:ZFIN;Acc:ZDB-GENE-060503-538]
57. neu3.3 ENSDARG00000058327, ENSDARG00000114607 23 0.981 - 0.981 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-061103-511]
58. C8H1orf222 C8H1orf222 36 0.981 - 0.981 - - - - - - -
59. kcnb2 ENSDARG00000038862 7 0.979 - - - 0.979 - - - - - potassium voltage-gated channel, Shab-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070912-170]
60. si:ch211-209j10.5 si:ch211-209j10.5 13 0.979 - - - 0.979 - - - - -
61. stk36 ENSDARG00000061095 113 0.978 - 0.978 - - - - - - - serine/threonine kinase 36 (fused homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030912-6]
62. snx8b ENSDARG00000078057 15 0.972 - - - - - 0.972 - - - sorting nexin 8b [Source:ZFIN;Acc:ZDB-GENE-090313-317]
63. ankk1 ENSDARG00000056921 119 0.972 - - - - - 0.972 - - - ankyrin repeat and kinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071015-4]
64. galnt13 ENSDARG00000099227 1059 0.972 - - - - - 0.972 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
65. FAXC FAXC 102 0.97 - - - - - 0.970 - - -
66. phactr3a ENSDARG00000058243 150 0.969 - 0.969 - - - - - - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
67. prdm13 ENSDARG00000078701 205 0.967 - - - - - 0.967 - - - PR domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-080616-1]
68. STARD5 ENSDARG00000076117 251 0.96 - 0.960 - - - - - - - StAR-related lipid transfer (START) domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-130103-4]
69. ccdc153 ENSDARG00000077161 93 0.958 - - - - - 0.958 - - - coiled-coil domain containing 153 [Source:ZFIN;Acc:ZDB-GENE-080204-16]
70. dre-mir-429b ENSDARG00000082968 212 0.958 - 0.958 - - - - - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
71. si:ch73-299h12.9 ENSDARG00000104488 81 0.957 - 0.957 - - - - - - - si:ch73-299h12.9 [Source:ZFIN;Acc:ZDB-GENE-081031-87]
72. LAMC2 ENSDARG00000068288 37 0.955 - 0.955 - - - - - - - laminin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-110222-3]
73. GADD45G_1 GADD45G_1 236 0.954 - - - - - 0.954 - - -
74. capn1b ENSDARG00000052748, ENSDARG00000117045 320 0.951 - - - - - 0.951 - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
75. cuedc1a ENSDARG00000068716 232 0.95 - - - - - 0.950 - - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
76. zgc:110377 zgc:110377 193 0.949 - 0.949 - - - - - - -
77. CU179656.1 ENSDARG00000107086 270 0.946 - - - - - 0.946 - - -
78. mitd1 ENSDARG00000044766 182 0.943 0.943 - - - - - - - - MIT, microtubule interacting and transport, domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-923]
79. CDH12 CDH12 44 0.943 - - - - - 0.943 - - -
80. gpr75 ENSDARG00000098526 32 0.943 - - - - - 0.943 - - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
81. GALNTL6 ENSDARG00000040048 33 0.943 - - - - - 0.943 - - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
82. csnk1g1 ENSDARG00000104342 57 0.943 - - - - - 0.943 - - - casein kinase 1, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-041212-63]
83. bgnb ENSDARG00000002945, ENSDARG00000110495 76 0.943 - - - - - 0.943 - - - biglycan b [Source:ZFIN;Acc:ZDB-GENE-040426-21]
84. scn1bb ENSDARG00000105003 239 0.941 - - - - - 0.941 - - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
85. CABZ01012857.1 CABZ01012857.1 78 0.939 - 0.939 - - - - - - -
86. LPHN3 LPHN3 195 0.938 - 0.938 - - - - - - -
87. pou5f3 ENSDARG00000044774 212 0.937 - 0.937 - - - - - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
88. RAPGEF4 ENSDARG00000079872 82 0.934 - - - - - 0.934 - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
89. RIBC2 ENSDARG00000075177 445 0.933 - 0.933 - - - - - - - RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
90. slco4a1 ENSDARG00000075948 74 0.932 - 0.932 - - - - - - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
91. WNK2 ENSDARG00000104989 429 0.931 - - - - - 0.931 - - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
92. slc1a3b ENSDARG00000043148 431 0.931 - - - - - 0.931 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
93. porcn ENSDARG00000052558, ENSDARG00000111556 110 0.931 - - - - - 0.931 - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
94. CABZ01041604.1 ENSDARG00000059854 35 0.93 - - - - - 0.930 - - - E3 ubiquitin-protein ligase RNF182-like [Source:NCBI gene;Acc:797048]
95. CR847990.1 CR847990.1 21 0.929 - - - - - 0.929 - - -
96. tbx16 ENSDARG00000007329 255 0.929 - - - - - 0.929 - - - T-box 16 [Source:ZFIN;Acc:ZDB-GENE-990615-5]
97. zgc:171626 zgc:171626 42 0.928 - 0.928 - - - - - - -
98. IGLON5 ENSDARG00000022176 1353 0.928 - - - - - 0.928 - - - IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
99. C25H1orf51 C25H1orf51 2460 0.924 0.924 - - - - - - - -
100. CT573433.2 CT573433.2 115 0.923 - - - - - 0.923 - - -

There are 1183 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA