Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for arf1

Gene Name Gene ID Reads Annotation
arf1 ENSDARG00000009484 5034 ADP-ribosylation factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-5]










Genes with expression patterns similar to arf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. arf1 ENSDARG00000009484 5034 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ADP-ribosylation factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-5]
2. tet3 ENSDARG00000062646 6672 2.975 - 0.759 - - - 0.744 0.759 - 0.713 tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
3. myeov2 3351 2.376 - 0.765 - - - 0.762 0.849 - - myeloma overexpressed 2
4. ELMO3 ENSDARG00000042126, ENSDARG00000110625 1900 2.35 0.777 - - - - 0.845 0.728 - - engulfment and cell motility 3 [Source:ZFIN;Acc:ZDB-GENE-050309-39]
5. myh9a ENSDARG00000063295 27935 2.337 - 0.778 - - - - 0.783 - 0.776 myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
6. tmem258 ENSDARG00000078785 9578 2.321 - 0.723 - - - - 0.801 - 0.797 transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
7. PVRL4_1 PVRL4_1 702 2.304 0.809 - - 0.743 - 0.752 - - -
8. arcn1a ENSDARG00000002792 2847 2.295 0.751 - - - - 0.766 0.778 - - archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
9. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 2.294 0.792 - - - - 0.779 0.723 - - ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
10. si:ch211-232i5.3 ENSDARG00000086874 1256 2.29 0.723 - - - - 0.843 0.724 - - si:ch211-232i5.3 [Source:ZFIN;Acc:ZDB-GENE-091204-88]
11. adam10a ENSDARG00000053468 9308 2.271 - 0.756 - - - 0.715 0.800 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
12. klf2b ENSDARG00000040432 1730 2.27 0.783 - - - - - 0.770 - 0.717 Kruppel-like factor 2b [Source:ZFIN;Acc:ZDB-GENE-011109-2]
13. spcs1 ENSDARG00000059298 5327 2.25 - 0.711 - - - 0.772 0.767 - - signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
14. C1H4orf33 C1H4orf33 2097 2.234 0.729 - - - - 0.727 0.778 - -
15. piezo1 ENSDARG00000076870 4704 2.232 - 0.785 - - - 0.708 0.739 - - piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
16. cldnb ENSDARG00000009544 6036 2.208 - - - - - 0.709 0.787 - 0.712 claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
17. slc39a7 ENSDARG00000104451 6368 2.172 0.706 - - - 0.705 0.761 - - - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
18. ggcx ENSDARG00000067805 3812 2.168 0.744 0.706 - - - 0.718 - - - gamma-glutamyl carboxylase [Source:ZFIN;Acc:ZDB-GENE-030826-27]
19. rer1 ENSDARG00000012747 6939 1.722 - - - - - 0.828 0.894 - - retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]
20. zgc:110333 ENSDARG00000040628 3250 1.711 - - - - - - 0.896 - 0.815 zgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
21. pdcd6ip ENSDARG00000025269 2522 1.652 - 0.868 - - - - 0.784 - - programmed cell death 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2678]
22. anxa2a ENSDARG00000003216 10684 1.646 - - - - - - 0.884 - 0.762 annexin A2a [Source:ZFIN;Acc:ZDB-GENE-030131-4282]
23. capn5a ENSDARG00000103317 1923 1.636 - - - - - 0.825 0.811 - - calpain 5a [Source:ZFIN;Acc:ZDB-GENE-061103-214]
24. zgc:100918 ENSDARG00000087243 5451 1.631 0.831 - - - - 0.800 - - - zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
25. pls3 ENSDARG00000037655 5175 1.629 0.834 - - - - - 0.795 - - plastin 3 (T isoform) [Source:ZFIN;Acc:ZDB-GENE-040718-10]
26. pdip5 pdip5 2643 1.619 0.747 - - - - - 0.872 - -
27. vasp vasp 3925 1.617 - 0.778 - - - - 0.839 - -
28. rac2 ENSDARG00000038010 5837 1.615 - - - - - 0.803 0.812 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
29. galnt12 ENSDARG00000055490 1653 1.609 0.807 - - - - - 0.802 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
30. gpm6ab ENSDARG00000004621 5825 1.609 - 0.796 - - - 0.813 - - - glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
31. zgc:56530 zgc:56530 6300 1.6 - - - - - 0.821 0.779 - -
32. ppl ENSDARG00000101043 9196 1.597 - - - - - 0.804 0.793 - - periplakin [Source:ZFIN;Acc:ZDB-GENE-041008-196]
33. atp8a2 ENSDARG00000077492 3637 1.594 0.817 0.777 - - - - - - - ATPase phospholipid transporting 8A2 [Source:ZFIN;Acc:ZDB-GENE-100209-2]
34. cldne ENSDARG00000043128 6960 1.59 - 0.742 - - - - 0.848 - - claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
35. CABZ01057013.1 CABZ01057013.1 1308 1.587 0.811 - - - - 0.776 - - -
36. ggnbp2 ENSDARG00000055086 1419 1.587 0.813 - - - - - 0.774 - - gametogenetin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-060929-52]
37. itgb4 ENSDARG00000028507 2568 1.585 0.760 - - - - 0.825 - - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
38. SERP1_1 ENSDARG00000076223 6668 1.585 - 0.725 - - - - 0.860 - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
39. FUCA1 FUCA1 1446 1.583 0.767 - - - - 0.816 - - -
40. anxa5b ENSDARG00000016470 2934 1.583 0.757 0.826 - - - - - - - annexin A5b [Source:ZFIN;Acc:ZDB-GENE-030131-9076]
41. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 1.582 - - - - - 0.706 0.876 - - isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
42. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.581 - - - - - 0.881 0.700 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
43. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.58 - 0.775 - - - - 0.805 - - ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
44. nrip1b ENSDARG00000068894 2699 1.58 - - - - - 0.876 0.704 - - nuclear receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4173]
45. pgrmc1 ENSDARG00000054172 5423 1.572 - 0.745 - - - - 0.827 - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
46. itgb1b.1 ENSDARG00000053232 4721 1.572 0.716 - - - - - 0.856 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
47. bckdk ENSDARG00000016904 3775 1.564 - 0.723 - - - 0.841 - - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
48. bcar1 ENSDARG00000056525 6563 1.563 0.819 - - - - 0.744 - - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
49. CU915738.1 CU915738.1 3723 1.561 - - - - - 0.758 0.803 - -
50. plcd1b ENSDARG00000034080 4074 1.56 - - - - - - 0.794 - 0.766 phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
51. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 1.558 - 0.776 - - - - 0.782 - - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
52. s100v1 ENSDARG00000070427 6633 1.556 - - - - - 0.749 0.807 - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
53. AGAP3 ENSDARG00000087822 4128 1.553 - - - - - 0.827 0.726 - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-110927-1]
54. s100u ENSDARG00000071014 4754 1.551 - - - - - 0.835 0.716 - - S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
55. anxa1b ENSDARG00000100095 7763 1.55 - 0.753 - - - - - - 0.797 annexin A1b [Source:ZFIN;Acc:ZDB-GENE-030131-6554]
56. rrbp1a ENSDARG00000013763 4723 1.546 - - - - - 0.723 0.823 - - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
57. ctnna1 ENSDARG00000102441 7984 1.545 - 0.781 - - - - 0.764 - - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
58. zgc:114045 ENSDARG00000069334, ENSDARG00000112063 991 1.541 0.810 - - - - - 0.731 - - zgc:114045 [Source:ZFIN;Acc:ZDB-GENE-050913-119]
59. gpx1a ENSDARG00000018146, ENSDARG00000114736 4652 1.541 0.748 0.793 - - - - - - - glutathione peroxidase 1a [Source:ZFIN;Acc:ZDB-GENE-030410-1]
60. agpat4 ENSDARG00000069044 4487 1.538 - - - - - - 0.760 - 0.778 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
61. llgl2 ENSDARG00000023920 2617 1.538 - 0.756 - - - - 0.782 - - lethal giant larvae homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-9877]
62. rab5c ENSDARG00000026712 4733 1.536 0.802 - - - - 0.734 - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
63. tln1 ENSDARG00000100729 5744 1.531 - 0.812 - - - 0.719 - - - talin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-48]
64. psph ENSDARG00000040314 1359 1.531 - 0.737 - - - - 0.794 - - phosphoserine phosphatase [Source:ZFIN;Acc:ZDB-GENE-050809-127]
65. tes ENSDARG00000051857 2020 1.528 0.730 - - - - - 0.798 - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
66. txlna ENSDARG00000077037 2614 1.526 - 0.761 - - - - 0.765 - - taxilin alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2900]
67. spint2 ENSDARG00000069476, ENSDARG00000113265 4147 1.525 0.810 0.715 - - - - - - - serine peptidase inhibitor, Kunitz type, 2 [Source:ZFIN;Acc:ZDB-GENE-061013-323]
68. btbd10b ENSDARG00000020252 7251 1.525 - - - - - 0.765 0.760 - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
69. degs2 ENSDARG00000042544 1912 1.524 0.760 - - - - - 0.764 - - delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
70. oclna ENSDARG00000005108 3280 1.523 - - - - - - 0.787 - 0.736 occludin a [Source:ZFIN;Acc:ZDB-GENE-040426-2685]
71. dad1 ENSDARG00000102105 14788 1.52 - 0.723 - - - - 0.797 - - defender against cell death 1 [Source:ZFIN;Acc:ZDB-GENE-060503-233]
72. pdlim1 ENSDARG00000019845 5765 1.515 - - - - - 0.784 0.731 - - PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]
73. OMG OMG 1202 1.515 0.775 - - - - - 0.740 - -
74. anp32a ENSDARG00000006487 28249 1.515 - - - - - 0.790 0.725 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
75. ATOX1 ENSDARG00000087693 4016 1.515 - 0.716 - - - - 0.799 - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
76. arl5c ENSDARG00000035719 1257 1.512 0.763 - - - - 0.749 - - - ADP-ribosylation factor-like 5C [Source:ZFIN;Acc:ZDB-GENE-040426-1866]
77. ndfip1 ENSDARG00000013979, ENSDARG00000111470, ENSDARG00000112351 2550 1.511 - 0.733 - - - - 0.778 - - Nedd4 family interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2767]
78. lrba ENSDARG00000031108 2136 1.509 - - - - - 0.804 - - 0.705 LPS-responsive vesicle trafficking, beach and anchor containing [Source:ZFIN;Acc:ZDB-GENE-090311-19]
79. elovl7b ENSDARG00000100185 2032 1.507 0.777 - - - - - 0.730 - - ELOVL fatty acid elongase 7b [Source:ZFIN;Acc:ZDB-GENE-030131-5485]
80. lpcat3 ENSDARG00000075178, ENSDARG00000109670 2713 1.505 - 0.715 - - - 0.790 - - - lysophosphatidylcholine acyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041111-232]
81. zgc:56493 ENSDARG00000031435 33407 1.497 - - - - - 0.735 0.762 - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
82. itpkb ENSDARG00000010059 2352 1.497 0.788 - - - - - - - 0.709 inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
83. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.495 - 0.788 - - - - 0.707 - - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
84. gstt1a ENSDARG00000042428, ENSDARG00000110738 3098 1.495 0.722 - - - - - 0.773 - - glutathione S-transferase theta 1a [Source:ZFIN;Acc:ZDB-GENE-031001-13]
85. c1galt1c1 ENSDARG00000036335 1623 1.494 - - - - - 0.709 0.785 - - C1GALT1-specific chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2772]
86. arpc5a ENSDARG00000039142 5482 1.494 - - - - - 0.732 0.762 - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
87. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 1.494 - 0.785 - - - - 0.709 - - Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
88. ftr83 ENSDARG00000025403, ENSDARG00000110533 1428 1.493 - - - - - 0.760 0.733 - - finTRIM family, member 83 [Source:ZFIN;Acc:ZDB-GENE-031002-11]
89. zgc:113442 ENSDARG00000101906 3092 1.491 - 0.738 - - - - 0.753 - - zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
90. gsnb ENSDARG00000045262 4382 1.49 - - - - - 0.706 0.784 - - gelsolin b [Source:ZFIN;Acc:ZDB-GENE-030131-8567]
91. dlx5a ENSDARG00000042296 3477 1.486 - 0.769 - - - - 0.717 - - distal-less homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-990415-49]
92. cwc25 ENSDARG00000003382 2134 1.481 0.703 - - - - - 0.778 - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
93. magt1 ENSDARG00000058062 3903 1.48 - 0.707 - - - 0.773 - - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
94. nos2b ENSDARG00000031976 935 1.48 - - - - - 0.706 0.774 - - nitric oxide synthase 2b, inducible [Source:ZFIN;Acc:ZDB-GENE-080916-1]
95. b3gnt2l ENSDARG00000068219 1875 1.479 - - - - - - 0.720 - 0.759 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2, like [Source:ZFIN;Acc:ZDB-GENE-061207-60]
96. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.479 0.764 - - - - 0.715 - - - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
97. LIMD2 ENSDARG00000078092 3414 1.476 - 0.726 - - - - 0.750 - - LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
98. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.475 - - - - - 0.770 0.705 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
99. anapc16 ENSDARG00000013822 5857 1.472 0.753 - - - - - 0.719 - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
100. tmem167a ENSDARG00000035914 3319 1.472 - - - - - - 0.752 - 0.720 transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]

There are 1031 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA