Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for appb

Gene Name Gene ID Reads Annotation
appb ENSDARG00000055543, ENSDARG00000109552 4461 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]










Genes with expression patterns similar to appb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. appb ENSDARG00000055543, ENSDARG00000109552 4461 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
2. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 4.233 0.747 - 0.946 0.860 - - 0.891 - 0.789 sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
3. plp1a ENSDARG00000103732 3544 4.188 - - 0.896 0.737 - 0.939 0.879 - 0.737 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
4. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 4.067 0.798 - 0.847 - - 0.841 0.874 - 0.707 meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
5. nova2 ENSDARG00000017673 7685 3.892 0.703 - 0.811 - - 0.785 0.871 - 0.722 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
6. ubtf ENSDARG00000035066 4070 3.487 - - - 0.804 0.982 0.879 - 0.822 - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
7. mdkb ENSDARG00000020708 5393 3.479 - - - 0.826 0.916 0.922 0.815 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
8. snrnp70 ENSDARG00000077126 5921 3.417 - 0.833 - - 0.992 0.770 - - 0.822 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
9. atp1b4 ENSDARG00000053262 1337 3.411 0.797 - - 0.842 - 0.953 0.819 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
10. CORO1C CORO1C 5554 3.382 0.704 0.782 0.918 - 0.978 - - - -
11. cd99l2 ENSDARG00000056722 5036 3.381 - - 0.865 - - 0.959 0.841 - 0.716 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
12. ctnnbip1 ENSDARG00000038954 2519 3.349 0.723 - 0.938 - 0.987 - - - 0.701 catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
13. tuba1c ENSDARG00000055216 8384 3.333 0.718 - 0.917 - - 0.862 0.836 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
14. gipc1 ENSDARG00000104483 2913 3.328 - 0.797 - 0.857 - 0.881 0.793 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
15. C19H7orf41 C19H7orf41 2243 3.315 0.723 - - 0.840 - 0.941 0.811 - -
16. CLIP3 ENSDARG00000054456 734 3.303 0.708 - - 0.880 - 0.916 0.799 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
17. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 3.28 0.812 0.726 - - - 0.886 0.856 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
18. tdg tdg 3269 3.27 - - 0.891 0.856 - 0.798 0.725 - -
19. stmn2a ENSDARG00000033234 2272 3.233 0.702 - - - - 0.919 0.859 - 0.753 stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
20. nkain1 ENSDARG00000006859 1961 3.232 0.721 - - - 0.995 0.744 0.772 - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
21. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 3.217 0.728 - - - - 0.866 0.841 - 0.782 NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
22. ZFHX3 ENSDARG00000103057 7759 3.191 0.702 - - 0.720 - 0.874 0.895 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
23. tmsb ENSDARG00000054911 6411 3.163 - 0.751 - - - 0.890 0.804 - 0.718 thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
24. vdac1 ENSDARG00000045132 8051 3.15 0.745 - 0.811 - - 0.796 - - 0.798 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
25. sumo3a ENSDARG00000028119 13447 3.13 0.729 - - - - 0.922 0.771 - 0.708 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
26. pl10 pl10 10795 3.022 - 0.798 0.706 - - 0.755 0.763 - -
27. sae1 ENSDARG00000010487 2028 2.977 0.710 0.802 - - - 0.754 0.711 - - SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
28. kansl3 ENSDARG00000029556 2487 2.758 - - 0.944 - 0.983 0.831 - - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
29. st18 663 2.7 - - - 0.893 - 0.945 0.862 - - suppression of tumorigenicity 18, zinc finger
30. xylt1 ENSDARG00000061248 2357 2.695 - - 0.925 - - 0.915 0.855 - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
31. wdhd1 ENSDARG00000015998 775 2.676 - - 0.937 0.918 - - 0.821 - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
32. tmem33 ENSDARG00000041332 2883 2.635 - - 0.907 0.741 0.987 - - - - transmembrane protein 33 [Source:ZFIN;Acc:ZDB-GENE-030131-5425]
33. CABZ01072954.1 CABZ01072954.1 2330 2.621 - - 0.931 - - 0.922 0.768 - -
34. pkib ENSDARG00000053110 527 2.607 - - 0.926 - - 0.902 0.779 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
35. btg2 ENSDARG00000020298 6616 2.607 - - - - 0.923 0.858 0.826 - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
36. CABZ01051991.1 CABZ01051991.1 346 2.601 - - - 0.895 - 0.844 0.862 - -
37. TMEM185A TMEM185A 5505 2.571 - - 0.892 0.888 - 0.791 - - -
38. C7H4orf48 C7H4orf48 1455 2.568 0.794 - - - - 0.926 0.848 - -
39. qki2 ENSDARG00000010018 2230 2.556 - - 0.920 - - 0.885 0.751 - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
40. tuba2 ENSDARG00000045014 1490 2.554 - 0.780 - - - 0.957 0.817 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
41. mapk12b ENSDARG00000006409 2246 2.549 - - - 0.741 - 0.948 0.860 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
42. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.547 - - - - - 0.919 0.871 - 0.757 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
43. irx5a ENSDARG00000034043 1694 2.546 - - - - 0.982 0.834 0.730 - - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
44. hnrnpub ENSDARG00000004735 16496 2.545 0.773 - - - - 0.870 0.902 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
45. tox ENSDARG00000032317 9126 2.541 - - 0.870 - - 0.830 0.841 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
46. sox2 ENSDARG00000070913 2763 2.535 0.786 - - - - 0.883 0.866 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
47. adam23a ENSDARG00000062323 580 2.533 - - - 0.897 - 0.787 0.849 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
48. plagx ENSDARG00000036855 3768 2.531 - - - 0.920 - - 0.823 - 0.788 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
49. si:ch73-21g5.7 ENSDARG00000093156 9412 2.529 0.707 - - - - 0.943 0.879 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
50. hmgb3a ENSDARG00000056725 15668 2.525 0.756 - - - - 0.851 0.918 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
51. unc119b ENSDARG00000044362 1528 2.52 - - - 0.880 - 0.775 0.865 - - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
52. atp6ap1a ENSDARG00000041417 898 2.512 - - - 0.885 - 0.925 0.702 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
53. lgi1a ENSDARG00000020493 1218 2.511 - - 0.929 - - 0.732 0.850 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
54. AP3B2 1874 2.509 - - - - 0.894 0.910 0.705 - - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
55. ndrg4 ENSDARG00000103937 1234 2.508 - - - 0.873 - 0.883 0.752 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
56. st8sia2 ENSDARG00000018788 2183 2.501 - - - - - 0.884 0.876 - 0.741 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
57. myt1b ENSDARG00000102879 5411 2.5 - - - - - 0.887 0.831 - 0.782 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
58. nrn1a ENSDARG00000071860 1311 2.499 - - - - - 0.925 0.864 - 0.710 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
59. stmn1b ENSDARG00000033655 9491 2.495 - - - - - 0.910 0.859 - 0.726 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
60. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.495 0.739 - - - - 0.911 0.845 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
61. mex3b ENSDARG00000058369 1867 2.495 - - - - - 0.908 0.844 - 0.743 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
62. pcdh1gc5 ENSDARG00000104826 10052 2.491 0.719 - - - - 0.909 0.863 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
63. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.491 - - - 0.823 - 0.839 0.829 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
64. klf7a ENSDARG00000073857 1226 2.486 - - - 0.768 - 0.822 0.896 - - Kruppel-like factor 7a [Source:ZFIN;Acc:ZDB-GENE-050522-276]
65. AKT3 AKT3 1729 2.485 - - - - - 0.877 0.832 - 0.776
66. LDLRAD4 LDLRAD4 1237 2.485 - - - 0.847 - 0.879 0.759 - -
67. C1H10orf12 C1H10orf12 1663 2.484 - 0.718 - 0.897 - 0.869 - - -
68. rac3b ENSDARG00000020795 1523 2.478 0.749 - - 0.827 - 0.902 - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
69. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.476 - - - 0.702 - 0.940 0.834 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
70. onecutl ENSDARG00000040253 2143 2.472 - - 0.928 - - 0.757 0.787 - - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
71. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 2.468 - 0.713 - - 0.851 0.904 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
72. ptbp2b ENSDARG00000015901 2458 2.467 0.726 - - - - 0.905 0.836 - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
73. hoxa9b ENSDARG00000056819 3081 2.461 - 0.750 - - - 0.830 0.881 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
74. mir10d-1 mir10d-1 860 2.46 0.728 - - - - 0.886 0.846 - -
75. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.455 - - - - - 0.861 0.775 - 0.819 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
76. tnika ENSDARG00000056218 728 2.454 0.724 - - - - 0.930 0.800 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
77. gng2_1 ENSDARG00000056831 113 2.453 - - - 0.903 - 0.818 0.732 - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
78. rdh12 ENSDARG00000018069 396 2.453 0.751 - - - - 0.884 0.818 - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
79. napg napg 645 2.45 0.783 - - - - 0.886 0.781 - -
80. mllt11 ENSDARG00000071026 2518 2.447 0.718 - - - - 0.872 0.857 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
81. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.444 - - - 0.840 - 0.894 0.710 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
82. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.441 - - - - - 0.880 0.787 - 0.774 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
83. rab23 ENSDARG00000004151 1077 2.439 - 0.799 - 0.810 - 0.830 - - - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
84. C8H1orf106 C8H1orf106 2690 2.439 0.756 - - 0.842 - - 0.841 - -
85. zic2b ENSDARG00000037178, ENSDARG00000112354 993 2.438 - - - 0.881 - 0.823 0.734 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
86. jazf1a ENSDARG00000102551 767 2.436 0.756 - - - - 0.884 0.796 - - JAZF zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-060503-492]
87. CDK5R1 CDK5R1 562 2.436 - - - 0.887 - 0.730 0.819 - -
88. rgs20 ENSDARG00000038859 331 2.432 - - - 0.834 - 0.898 0.700 - - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
89. smarce1 ENSDARG00000016871 9628 2.427 - - 0.850 - - 0.822 0.755 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
90. SHC3 ENSDARG00000098909 332 2.425 - - - 0.745 - 0.829 0.851 - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
91. stx1b ENSDARG00000000503 2724 2.421 0.765 - - - - 0.837 0.819 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
92. supt16h ENSDARG00000079949 4755 2.419 - 0.765 - - 0.930 - - - 0.724 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
93. gabra5 ENSDARG00000070730 156 2.418 0.759 - - - - 0.809 0.850 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
94. npas3b npas3b 1446 2.418 - - - - - 0.726 0.863 - 0.829
95. nova1 ENSDARG00000020178 4129 2.415 - - 0.774 - - 0.847 0.794 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
96. ppp3ca ENSDARG00000004988 615 2.41 0.718 - - - - 0.927 0.765 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
97. adarb1a ENSDARG00000041609 476 2.409 0.707 - - - - 0.895 0.807 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
98. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.409 0.718 - - - - 0.921 - - 0.770 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
99. add2 ENSDARG00000074581 1402 2.407 - 0.709 - - - 0.888 0.810 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
100. mad2l1 ENSDARG00000004713 3398 2.407 - - 0.923 - - 0.769 0.715 - - MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]

There are 3308 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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