Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for apopt1

Gene Name Gene ID Reads Annotation
apopt1 ENSDARG00000092473 682 apoptogenic 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-090313-66]










Genes with expression patterns similar to apopt1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. apopt1 ENSDARG00000092473 682 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 apoptogenic 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-090313-66]
2. si:ch211-113p18.3 ENSDARG00000087835 377 1.838 - - - 0.896 - - - 0.942 - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
3. cks2 ENSDARG00000071410, ENSDARG00000116198 966 1.835 - - - - - - - 0.943 0.892 CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
4. phf10 ENSDARG00000070084 1210 1.822 - - - - - - - 0.923 0.899 PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
5. si:ch211-113e8.10 ENSDARG00000079631 498 1.811 - - - 0.877 - - - - 0.934 si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
6. mfsd5 ENSDARG00000015997 570 1.807 - - - 0.863 - - - 0.944 - major facilitator superfamily domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040718-468]
7. nexmifb ENSDARG00000029296 416 1.807 - - - 0.890 - - - 0.917 - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
8. UBL4A UBL4A 1115 1.804 - - - - - - - 0.901 0.903
9. irx5a ENSDARG00000034043 1694 1.804 - - - - - - - 0.902 0.902 iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
10. bbip1 ENSDARG00000071046, ENSDARG00000112897, ENSDARG00000116522 1062 1.787 - - - - - - - 0.889 0.898 BBSome interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050208-445]
11. mntb ENSDARG00000073988 1023 1.782 - - - 0.895 - - - - 0.887 MAX network transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-070820-8]
12. SPAG9 ENSDARG00000078142 629 1.779 - - - 0.843 - - - 0.936 - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
13. araf ENSDARG00000054533 1132 1.772 - - - - - 0.865 - - 0.907 A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
14. CASKIN2_1 CASKIN2_1 2299 1.761 - - - 0.826 - - - 0.935 -
15. cetn3 ENSDARG00000011825 1087 1.753 - - - 0.810 - - - 0.943 - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
16. tpst1 ENSDARG00000073872 2490 1.747 - - - - - - - 0.833 0.914 tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
17. tial1 ENSDARG00000009525 1856 1.728 - - - - - 0.770 - 0.958 - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
18. ptpn21 ENSDARG00000062248 2010 1.726 - 0.799 - - - - - 0.927 - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
19. creg2 ENSDARG00000000666 643 1.705 - - - 0.772 - - - - 0.933 cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
20. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.699 - - - - - - - 0.883 0.816 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
21. ttc14 ENSDARG00000013845 1192 1.695 - 0.830 - - - - - - 0.865 tetratricopeptide repeat domain 14 [Source:ZFIN;Acc:ZDB-GENE-050327-26]
22. hoxa3a ENSDARG00000103862 2239 1.691 - 0.801 - - - - - 0.890 - homeobox A3a [Source:ZFIN;Acc:ZDB-GENE-000823-3]
23. HDX ENSDARG00000079382 513 1.69 - - - 0.755 - - - - 0.935 highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
24. asnsd1 830 1.687 - - - - - 0.752 - 0.935 - asparagine synthetase domain containing 1, transcript variant X1
25. rwdd ENSDARG00000068256 964 1.686 - 0.799 - - - - - - 0.887 RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
26. eef2a.1 ENSDARG00000042094 1781 1.681 - - - 0.728 - - - - 0.953 eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
27. lysmd3 ENSDARG00000024693 754 1.681 0.758 - - - - - - - 0.923 LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
28. gid8b ENSDARG00000037589 2121 1.678 - - - 0.774 - - - - 0.904 GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
29. gpr143 ENSDARG00000034572 559 1.672 - 0.714 - - - - - - 0.958 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
30. CREBZF ENSDARG00000089787 4261 1.672 - 0.719 - - - - - 0.953 - CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
31. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 1.671 - 0.731 - - - - - 0.940 - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
32. hck ENSDARG00000058647 318 1.667 0.706 - - - - - - - 0.961 HCK proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-090313-72]
33. CFP ENSDARG00000094451 852 1.664 - - - 0.795 - - - - 0.869 complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
34. smg6 ENSDARG00000100481 493 1.662 - 0.709 - - - - - - 0.953 SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
35. mast4 1164 1.657 - 0.747 - - - - - 0.910 - microtubule associated serine/threonine kinase family member 4, transcript variant X6
36. snrnp40 ENSDARG00000023160 1108 1.655 - 0.733 - - - - - 0.922 - small nuclear ribonucleoprotein 40 (U5) [Source:ZFIN;Acc:ZDB-GENE-040426-978]
37. adipor1a ENSDARG00000002912, ENSDARG00000113136 796 1.654 - - - 0.772 - - - - 0.882 adiponectin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-040718-169]
38. PHB2 PHB2 3755 1.652 - - - - - - - 0.773 0.879
39. tspan5b ENSDARG00000070449 1056 1.651 0.711 - - - - - - - 0.940 tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
40. dcaf13 ENSDARG00000002267 2435 1.644 - - - - - - - 0.778 0.866 ddb1 and cul4 associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-703]
41. txnl4a ENSDARG00000036190 2048 1.643 - - - - - - - 0.803 0.840 thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
42. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 1.637 - - - - - - 0.730 0.907 - actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
43. gle1 ENSDARG00000043559 1362 1.636 - - - - - 0.757 - 0.879 - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
44. prpf4bb ENSDARG00000040310 2260 1.634 - - - - - - - 0.889 0.745 pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
45. ercc1 ENSDARG00000031680 900 1.629 - 0.713 - - - - - 0.916 - excision repair cross-complementation group 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2606]
46. rtkn2 rtkn2 1092 1.619 - - - 0.875 - 0.744 - - -
47. aldocb ENSDARG00000019702 2111 1.618 - 0.777 - - - - - 0.841 - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
48. C8H9orf116 C8H9orf116 379 1.618 - 0.816 - 0.802 - - - - -
49. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 1.616 - - - - - 0.708 - 0.908 - metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]
50. chmp1a ENSDARG00000102643 1078 1.614 - 0.702 - 0.912 - - - - - charged multivesicular body protein 1A [Source:ZFIN;Acc:ZDB-GENE-040426-1474]
51. CITED1 ENSDARG00000077769 692 1.613 - - - 0.722 - - - 0.891 - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5596]
52. ednraa ENSDARG00000011876, ENSDARG00000114764 1573 1.611 - - - - - 0.741 - 0.870 - endothelin receptor type Aa [Source:ZFIN;Acc:ZDB-GENE-010906-2]
53. ENSDARG00000074422 ENSDARG00000074422 61 1.611 - 0.725 - 0.886 - - - - -
54. cwc22 ENSDARG00000014008 2385 1.606 0.757 - - - - - - - 0.849 CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
55. gtf2h2 ENSDARG00000016514 380 1.604 - - - 0.842 - - 0.762 - - general transcription factor IIH, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1959]
56. suv420h1 1810 1.601 - 0.773 - - - - - - 0.828 suppressor of variegation 4-20 homolog 1 (Drosophila)
57. ube2d2l ENSDARG00000099749 1462 1.6 - - - - - 0.710 - - 0.890 ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like [Source:ZFIN;Acc:ZDB-GENE-030131-7384]
58. zgc:63637 zgc:63637 3636 1.59 - - - 0.789 - - - - 0.801
59. srsf9 ENSDARG00000008097 2405 1.582 - - - - - - 0.728 0.854 - serine/arginine-rich splicing factor 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2397]
60. snx5 ENSDARG00000020442 2463 1.567 - 0.826 - - - - - - 0.741 sorting nexin 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2857]
61. gpt2 ENSDARG00000012199 1415 1.565 - 0.768 - - - - 0.797 - - glutamic pyruvate transaminase (alanine aminotransferase) 2 [Source:ZFIN;Acc:ZDB-GENE-030729-8]
62. sumo3b ENSDARG00000035993 3414 1.562 - - - - - - - 0.751 0.811 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
63. JHDM1D JHDM1D 2277 1.554 - - - - - - - 0.813 0.741
64. mtss1l mtss1l 2494 1.55 - - - - - - - 0.819 0.731
65. cpsf1 ENSDARG00000034178 2036 1.545 - - - - - 0.714 - - 0.831 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
66. polr2k ENSDARG00000075616 2047 1.543 - 0.709 - - - - - - 0.834 polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
67. eps15l1a ENSDARG00000042670 1565 1.543 - - - 0.717 - - - - 0.826 epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
68. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 1.54 0.716 0.824 - - - - - - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
69. drg1 ENSDARG00000039345 7545 1.531 - - - - - 0.726 - 0.805 - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
70. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.526 - 0.711 - 0.815 - - - - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
71. stx12 ENSDARG00000098813 2576 1.525 - 0.733 - - - - - - 0.792 syntaxin 12 [Source:ZFIN;Acc:ZDB-GENE-040625-11]
72. med13b ENSDARG00000003910 1143 1.521 - 0.740 - - - 0.781 - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
73. tpp1 ENSDARG00000042793 1497 1.52 - - - 0.804 - - 0.716 - - tripeptidyl peptidase I [Source:ZFIN;Acc:ZDB-GENE-030131-6654]
74. RBM6 ENSDARG00000077060 3521 1.52 - - - - - 0.708 - - 0.812 RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
75. csrnp2 ENSDARG00000075972 1650 1.517 - - - 0.798 - - - 0.719 - cysteine-serine-rich nuclear protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-137]
76. aqp1a.1 ENSDARG00000023713 3237 1.516 - 0.765 - - - - - 0.751 - aquaporin 1a (Colton blood group), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7764]
77. palm1b ENSDARG00000007818 2128 1.512 - - - - - - - 0.722 0.790 paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
78. pcyt1aa ENSDARG00000011233 1985 1.506 - 0.729 - - - 0.777 - - - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
79. TNPO2 ENSDARG00000042887 2290 1.506 - - - - - 0.743 - - 0.763 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
80. tmem176l.1 ENSDARG00000099491 860 1.504 - - - 0.782 - - 0.722 - - transmembrane protein 176l.1 [Source:ZFIN;Acc:ZDB-GENE-080829-11]
81. BX511021.3 ENSDARG00000117414 592 1.502 - - - - 0.719 - 0.783 - -
82. cdc34a ENSDARG00000069708 1145 1.495 - 0.770 - - - 0.725 - - - cell division cycle 34 homolog (S. cerevisiae) a [Source:ZFIN;Acc:ZDB-GENE-040426-713]
83. hira ENSDARG00000013434 2204 1.492 0.724 0.768 - - - - - - - histone cell cycle regulator a [Source:ZFIN;Acc:ZDB-GENE-030131-6296]
84. srcap ENSDARG00000005236 1740 1.491 - 0.730 - - - 0.761 - - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
85. rcbtb2 ENSDARG00000090687 1658 1.472 - 0.772 - 0.700 - - - - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
86. efnb1 ENSDARG00000007723, ENSDARG00000116351 1595 1.469 - 0.762 - 0.707 - - - - - ephrin-B1 [Source:ZFIN;Acc:ZDB-GENE-010618-2]
87. ptprsb 1085 1.462 - 0.731 - - - - - - 0.731 protein tyrosine phosphatase, receptor type, s, b
88. hip1 ENSDARG00000062972, ENSDARG00000112248 438 1.453 0.740 - - - - 0.713 - - - huntingtin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-010328-15]
89. MTA1 ENSDARG00000007198 731 1.448 - 0.735 - 0.713 - - - - - metastasis associated 1 [Source:ZFIN;Acc:ZDB-GENE-131121-353]
90. kdm5c ENSDARG00000006124 4389 1.437 - 0.721 - - - 0.716 - - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
91. ncoa2 ENSDARG00000017929 2520 1.428 - - - 0.705 - 0.723 - - - nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-010406-3]
92. si:ch211-220f16.2 ENSDARG00000007976 638 1.424 - - - 0.711 - 0.713 - - - si:ch211-220f16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-199]
93. ireb2 ENSDARG00000021466 699 1.424 - 0.702 - - - 0.722 - - - iron-responsive element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-051205-1]
94. C23H20orf112 C23H20orf112 545 1.422 - 0.706 - 0.716 - - - - -
95. ZNF335 ENSDARG00000076920 456 0.99 - - - - - - - 0.990 - zinc finger protein 335 [Source:HGNC Symbol;Acc:HGNC:15807]
96. pus7 ENSDARG00000031774 195 0.974 - - - - - - - - 0.974 pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
97. zgc:173548 ENSDARG00000070048 558 0.971 - - - - - - - - 0.971 zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
98. slc25a43 ENSDARG00000102048 489 0.968 - - - - - - - - 0.968 solute carrier family 25, member 43 [Source:ZFIN;Acc:ZDB-GENE-030616-69]
99. pigl ENSDARG00000067752, ENSDARG00000116105 282 0.967 - - - - - - - - 0.967 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
100. AKAP12 AKAP12 140 0.966 - - - - - - - - 0.966

There are 1514 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA