Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for apoob

Gene Name Gene ID Reads Annotation
apoob ENSDARG00000026444, ENSDARG00000109942 4 apolipoprotein O, b [Source:ZFIN;Acc:ZDB-GENE-041001-40]










Genes with expression patterns similar to apoob

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. apoob ENSDARG00000026444, ENSDARG00000109942 4 4 1.000 - - 1.000 - - - 1.000 1.000 apolipoprotein O, b [Source:ZFIN;Acc:ZDB-GENE-041001-40]
2. pappab ENSDARG00000059858 11 1.734 - - - 1.000 - - - 0.734 - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
3. ghrh ENSDARG00000069481, ENSDARG00000111551 9 1.71 - - - 1.000 - - - - 0.710 growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
4. Telomerase-vert Telomerase-vert 8 1 1.000 - - - - - - - -
5. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1 1.000 - - - - - - - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
6. arhgap30 arhgap30 6 1 - - - 1.000 - - - - -
7. si:ch211-117m20.4 ENSDARG00000094286 7 1 1.000 - - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
8. tmem151a ENSDARG00000079908 2 1 1.000 - - - - - - - - transmembrane protein 151A [Source:ZFIN;Acc:ZDB-GENE-091118-118]
9. U6_21 U6_21 0 1 - - - 1.000 - - - - -
10. ABCC6 ABCC6 5 1 - - - 1.000 - - - - -
11. si:ch73-123f19.2 si:ch73-123f19.2 0 1 - - - 1.000 - - - - -
12. gng2_1 ENSDARG00000056831 113 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
13. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1 1.000 - - - - - - - - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
14. si:ch211-239f4.4 si:ch211-239f4.4 12 1 1.000 - - - - - - - -
15. C11H3orf83_1 C11H3orf83_1 3 1 - - - 1.000 - - - - -
16. CR847990.1 CR847990.1 21 1 1.000 - - - - - - - -
17. KHNYN ENSDARG00000092488 10 1 1.000 - - - - - - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
18. GRM5_1 GRM5_1 18 1 1.000 - - - - - - - -
19. si:ch211-208f21.4 si:ch211-208f21.4 4 1 1.000 - - - - - - - -
20. ZNF835 ZNF835 6 1 1.000 - - - - - - - -
21. si:dkey-96n2.1 ENSDARG00000092172 0 1 - - - 1.000 - - - - - si:dkey-96n2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1759]
22. UNC13A UNC13A 36 1 1.000 - - - - - - - -
23. si:dkey-46g23.5 ENSDARG00000008835 7 1 1.000 - - - - - - - - si:dkey-46g23.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9306]
24. wdr27_1 ENSDARG00000053386 1 1 1.000 - - - - - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
25. si:dkeyp-107f9.4 ENSDARG00000104468 11 1 1.000 - - - - - - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
26. P2RY11 ENSDARG00000014929 75 1 1.000 - - - - - - - - purinergic receptor P2Y11 [Source:ZFIN;Acc:ZDB-GENE-111221-4]
27. il11b ENSDARG00000058557 17 1 - - - 1.000 - - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
28. si:ch211-222j14.1 si:ch211-222j14.1 0 1 - - - 1.000 - - - - -
29. PLD1 PLD1 158 1 1.000 - - - - - - - -
30. zgc:114037_2 11 1 1.000 - - - - - - - - zgc:114037
31. CABZ01053483.1 CABZ01053483.1 5 1 - - - - - - - - 1.000
32. PLCB2 3 1 - - - - - - - - 1.000 phospholipase C, beta 2
33. ECT2L 39 1 1.000 - - - - - - - - epithelial cell transforming 2 like, transcript variant X4
34. fubp3 ENSDARG00000086896 21 1 1.000 - - - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
35. VSTM5 4 1 1.000 - - - - - - - - V-set and transmembrane domain containing 5
36. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - 1.000 - - - - -
37. ptk2ba ENSDARG00000022841 19 1 1.000 - - - - - - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
38. elmod3 ENSDARG00000074742 6 1 - - - 1.000 - - - - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
39. slco4a1 ENSDARG00000075948 74 1 1.000 - - - - - - - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
40. si:ch211-163b2.4 ENSDARG00000094890 140 1 1.000 - - - - - - - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
41. si:dkey-21o19.6 si:dkey-21o19.6 18 1 1.000 - - - - - - - -
42. AL929453.1 ENSDARG00000115950 31 1 1.000 - - - - - - - -
43. si:dkey-24i24.3 ENSDARG00000088452 27 1 1.000 - - - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
44. rapgef6 ENSDARG00000010945 3 1 1.000 - - - - - - - - Rap guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-030131-6972]
45. agbl5 ENSDARG00000045900 2 1 - - - 1.000 - - - - - ATP/GTP binding protein-like 5 [Source:ZFIN;Acc:ZDB-GENE-040822-29]
46. isg15 ENSDARG00000086374 8 1 1.000 - - - - - - - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
47. ntrk1 ENSDARG00000004586 19 1 1.000 - - - - - - - - neurotrophic tyrosine kinase, receptor, type 1 [Source:ZFIN;Acc:ZDB-GENE-980526-118]
48. snoU13 snoU13 2 1 - - - 1.000 - - - - -
49. BX530409.1 BX530409.1 65 1 1.000 - - - - - - - -
50. vwf ENSDARG00000077231 5 1 - - - 1.000 - - - - - von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1]
51. CU856140.1 CU856140.1 4316 1 - - - 1.000 - - - - -
52. itprip ENSDARG00000015576 62 1 1.000 - - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-050417-422]
53. btbd3b ENSDARG00000087517 107 1 1.000 - - - - - - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
54. pcdh1gb9 ENSDARG00000088475 71 1 1.000 - - - - - - - - protocadherin 1 gamma b 9 [Source:ZFIN;Acc:ZDB-GENE-041118-18]
55. CU681842.3 CU681842.3 2 1 - - - 1.000 - - - - -
56. ephb2a ENSDARG00000037373, ENSDARG00000114174 104 1 1.000 - - - - - - - - eph receptor B2a [Source:ZFIN;Acc:ZDB-GENE-070713-2]
57. cygb2 ENSDARG00000070148, ENSDARG00000109892, ENSDARG00000114471 30 1 1.000 - - - - - - - - cytoglobin 2 [Source:ZFIN;Acc:ZDB-GENE-060920-1]
58. si:ch211-262h13.6 si:ch211-262h13.6 0 1 - - - 1.000 - - - - -
59. rhol ENSDARG00000070666 0 1 - - - 1.000 - - - - - rhodopsin, like [Source:ZFIN;Acc:ZDB-GENE-070424-6]
60. buc ENSDARG00000096095 0 1 - - - 1.000 - - - - - bucky ball [Source:ZFIN;Acc:ZDB-GENE-070117-694]
61. si:ch211-112l17.3 si:ch211-112l17.3 8 1 - - - 1.000 - - - - -
62. GPX2 ENSDARG00000089149 10 1 - - - 1.000 - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
63. sox8 sox8 109 1 - - - 1.000 - - - - -
64. SUSD1 ENSDARG00000058839 4 1 - - - - - - - - 1.000 sushi domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-169]
65. baiap2b ENSDARG00000103333, ENSDARG00000111085, ENSDARG00000112327, ENSDARG00000113723 30 1 1.000 - - - - - - - - BAI1-associated protein 2b [Source:ZFIN;Acc:ZDB-GENE-100812-7]
66. dre-mir-429b ENSDARG00000082968 212 1 1.000 - - - - - - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
67. tdo2b ENSDARG00000023176 8 1 1.000 - - - - - - - - tryptophan 2,3-dioxygenase b [Source:ZFIN;Acc:ZDB-GENE-030131-6014]
68. CCSER1 ENSDARG00000075919 16 1 - - - 1.000 - - - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
69. RAP1GDS1 ENSDARG00000073741 0 1 - - - 1.000 - - - - - Rap1 GTPase-GDP dissociation stimulator 1 [Source:HGNC Symbol;Acc:HGNC:9859]
70. si:ch73-67c22.3 si:ch73-67c22.3 30 1 - - - 1.000 - - - - -
71. si:ch211-278f21.4 si:ch211-278f21.4 0 1 - - - 1.000 - - - - -
72. si:ch211-218d20.10 si:ch211-218d20.10 4 1 1.000 - - - - - - - -
73. ARHGAP6 33 1 1.000 - - - - - - - - Rho GTPase activating protein 6
74. CCSAP CCSAP 147 1 1.000 - - - - - - - -
75. ZNF337_7 ZNF337_7 198 1 1.000 - - - - - - - -
76. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - 1.000 - - - - -
77. efemp2b_1 ENSDARG00000020811 77 1 1.000 - - - - - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
78. kcnma1b 0 1 - - - 1.000 - - - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1b
79. gpr19 ENSDARG00000102226 17 1 1.000 - - - - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
80. si:ch1073-418f12.2 si:ch1073-418f12.2 15 1 1.000 - - - - - - - -
81. FJX1 ENSDARG00000035873 22 1 1.000 - - - - - - - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
82. noxo1b ENSDARG00000056374 78 1 1.000 - - - - - - - - NADPH oxidase organizer 1b [Source:ZFIN;Acc:ZDB-GENE-101203-1]
83. erap2 ENSDARG00000098618 16 1 - - - 1.000 - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
84. CABZ01112401.1 CABZ01112401.1 0 1 - - - 1.000 - - - - -
85. si:dkey-13n23.3 ENSDARG00000070465, ENSDARG00000102714 85 1 1.000 - - - - - - - - si:dkey-13n23.3 [Source:ZFIN;Acc:ZDB-GENE-120214-42]
86. prf1.8 1 1 1.000 - - - - - - - - perforin 1.8
87. CDR2_1 CDR2_1 8 1 - - - 1.000 - - - - -
88. RAB31 0 1 - - - 1.000 - - - - - RAB31, member RAS oncogene family, transcript variant X1
89. WNK3 WNK3 36 1 1.000 - - - - - - - -
90. CABZ01059406.1 ENSDARG00000088775 1 1 - - - 1.000 - - - - -
91. itga2.1 ENSDARG00000069390 6 1 - - - - - - - - 1.000 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
92. NLRP1 NLRP1 54 1 1.000 - - - - - - - -
93. rassf4 ENSDARG00000012460 43 1 1.000 - - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
94. CABZ01117474.1 CABZ01117474.1 2 1 1.000 - - - - - - - -
95. vti1a ENSDARG00000045065 7 1 - - - 1.000 - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:ZFIN;Acc:ZDB-GENE-050809-135]
96. cyp27a7 ENSDARG00000033802 216 1 1.000 - - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
97. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1 1.000 - - - - - - - - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
98. TRPM4 TRPM4 60 1 1.000 - - - - - - - -
99. RP1 ENSDARG00000077687 6 1 1.000 - - - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
100. helq ENSDARG00000079818 133 1 1.000 - - - - - - - - helicase, POLQ like [Source:ZFIN;Acc:ZDB-GENE-060503-421]

There are 452 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA