Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for apoob

Gene Name Gene ID Reads Annotation
apoob ENSDARG00000026444, ENSDARG00000109942 4 apolipoprotein O, b [Source:ZFIN;Acc:ZDB-GENE-041001-40]










Genes with expression patterns similar to apoob

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. apoob ENSDARG00000026444, ENSDARG00000109942 4 4 1.000 - - 1.000 - - - 1.000 1.000 apolipoprotein O, b [Source:ZFIN;Acc:ZDB-GENE-041001-40]
2. pappab ENSDARG00000059858 11 1.734 - - - 1.000 - - - 0.734 - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
3. ghrh ENSDARG00000069481, ENSDARG00000111551 9 1.71 - - - 1.000 - - - - 0.710 growth hormone releasing hormone [Source:ZFIN;Acc:ZDB-GENE-070426-1]
4. efemp2b_1 ENSDARG00000020811 77 1 1.000 - - - - - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
5. CU469509.3 CU469509.3 1 1 - - - 1.000 - - - - -
6. ablim1a ENSDARG00000060149 228 1 1.000 - - - - - - - - actin binding LIM protein 1a [Source:ZFIN;Acc:ZDB-GENE-080219-41]
7. si:dkey-233e3.6 si:dkey-233e3.6 1 1 1.000 - - - - - - - -
8. dre-mir-429b ENSDARG00000082968 212 1 1.000 - - - - - - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
9. znf384l ENSDARG00000001015 137 1 1.000 - - - - - - - - zinc finger protein 384 like [Source:ZFIN;Acc:ZDB-GENE-030616-498]
10. si:ch211-190k17.31 si:ch211-190k17.31 29 1 1.000 - - - - - - - -
11. kcnq2a ENSDARG00000075307 7 1 - - - 1.000 - - - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]
12. si:ch73-92e20.2 si:ch73-92e20.2 2 1 - - - 1.000 - - - - -
13. snoU13 snoU13 2 1 - - - 1.000 - - - - -
14. zgc:153311 ENSDARG00000015964 85 1 - - - 1.000 - - - - - zgc:153311 [Source:ZFIN;Acc:ZDB-GENE-060825-194]
15. si:ch73-115f13.1 si:ch73-115f13.1 15 1 1.000 - - - - - - - -
16. si:ch73-123f19.2 si:ch73-123f19.2 0 1 - - - 1.000 - - - - -
17. C6H16orf45 C6H16orf45 0 1 - - - 1.000 - - - - -
18. NLRP1 NLRP1 54 1 1.000 - - - - - - - -
19. il11b ENSDARG00000058557 17 1 - - - 1.000 - - - - - interleukin 11b [Source:ZFIN;Acc:ZDB-GENE-051019-2]
20. ADAMTS15_1 ADAMTS15_1 11 1 - - - 1.000 - - - - -
21. mamdc2a ENSDARG00000098345 21 1 - - - 1.000 - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
22. GRM5_1 GRM5_1 18 1 1.000 - - - - - - - -
23. CCSER1 ENSDARG00000075919 16 1 - - - 1.000 - - - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
24. BX000430.1 ENSDARG00000112057 135 1 1.000 - - - - - - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
25. kiss2 ENSDARG00000077985 2 1 1.000 - - - - - - - - kisspeptin 2 [Source:ZFIN;Acc:ZDB-GENE-090526-1]
26. erap2 ENSDARG00000098618 16 1 - - - 1.000 - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
27. PATL2 PATL2 10 1 - - - 1.000 - - - - -
28. fbxo36b ENSDARG00000039152 7 1 - - - 1.000 - - - - - F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
29. si:dkey-15h8.14 si:dkey-15h8.14 139 1 1.000 - - - - - - - -
30. sycp2 ENSDARG00000088950 3 1 1.000 - - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
31. ARHGAP6 33 1 1.000 - - - - - - - - Rho GTPase activating protein 6
32. C25H11orf74 C25H11orf74 161 1 1.000 - - - - - - - -
33. si:ch211-135l21.9 si:ch211-135l21.9 8 1 - - - 1.000 - - - - -
34. CACNG5 CACNG5 1 1 - - - 1.000 - - - - -
35. si:dkey-46g23.5 ENSDARG00000008835 7 1 1.000 - - - - - - - - si:dkey-46g23.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9306]
36. nfixb ENSDARG00000061836 7 1 1.000 - - - - - - - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
37. ZNF835 ZNF835 6 1 1.000 - - - - - - - -
38. prf1.8 1 1 1.000 - - - - - - - - perforin 1.8
39. EMB ENSDARG00000059485 35 1 1.000 - - - - - - - - embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]
40. crispld1a ENSDARG00000077275 7 1 1.000 - - - - - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
41. si:ch211-112l17.3 si:ch211-112l17.3 8 1 - - - 1.000 - - - - -
42. nkd3l ENSDARG00000070419 2 1 - - - - - - - - 1.000 naked cuticle homolog 3, like [Source:ZFIN;Acc:ZDB-GENE-060503-555]
43. si:ch211-103n10.5 ENSDARG00000077504, ENSDARG00000116548 8 1 - - - 1.000 - - - - - si:ch211-103n10.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5155]
44. elmod3 ENSDARG00000074742 6 1 - - - 1.000 - - - - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]
45. si:ch211-286e11.3 si:ch211-286e11.3 20 1 1.000 - - - - - - - -
46. ZNF337_7 ZNF337_7 198 1 1.000 - - - - - - - -
47. RAP1GDS1 ENSDARG00000073741 0 1 - - - 1.000 - - - - - Rap1 GTPase-GDP dissociation stimulator 1 [Source:HGNC Symbol;Acc:HGNC:9859]
48. CR388416.2 CR388416.2 3 1 - - - 1.000 - - - - -
49. VOPP1_1 VOPP1_1 73 1 1.000 - - - - - - - -
50. BX119910.15 BX119910.15 4 1 - - - 1.000 - - - - -
51. pax7a ENSDARG00000100398, ENSDARG00000111233 37 1 1.000 - - - - - - - - paired box 7a [Source:ZFIN;Acc:ZDB-GENE-990415-201]
52. lmx1a ENSDARG00000020354 111 1 1.000 - - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
53. CU681842.3 CU681842.3 2 1 - - - 1.000 - - - - -
54. rhbdd3 ENSDARG00000079816 2 1 1.000 - - - - - - - - rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
55. cox5aa_1 ENSDARG00000088383 3 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
56. si:ch73-44m9.1 ENSDARG00000077115 3 1 1.000 - - - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
57. GRIK3 ENSDARG00000077715 178 1 1.000 - - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
58. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 1.000 - - - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
59. CABZ01117474.1 CABZ01117474.1 2 1 1.000 - - - - - - - -
60. grpr ENSDARG00000056620 66 1 1.000 - - - - - - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
61. ptk2ba ENSDARG00000022841 19 1 1.000 - - - - - - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
62. HEPHL1 HEPHL1 309 1 - - - 1.000 - - - - -
63. TCERG1L ENSDARG00000109963 2 1 - - - 1.000 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
64. si:ch211-231i17.5 si:ch211-231i17.5 154 1 1.000 - - - - - - - -
65. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1 1.000 - - - - - - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
66. CABZ01112401.1 CABZ01112401.1 0 1 - - - 1.000 - - - - -
67. wdr27_1 ENSDARG00000053386 1 1 1.000 - - - - - - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
68. si:ch211-262h13.6 si:ch211-262h13.6 0 1 - - - 1.000 - - - - -
69. arhgap30 arhgap30 6 1 - - - 1.000 - - - - -
70. nsmfb ENSDARG00000101234 4 1 - - - 1.000 - - - - - NMDA receptor synaptonuclear signaling and neuronal migration factor b [Source:ZFIN;Acc:ZDB-GENE-080603-4]
71. si:rp71-18l21.1 si:rp71-18l21.1 2 1 1.000 - - - - - - - -
72. si:ch211-117m20.4 ENSDARG00000094286 7 1 1.000 - - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
73. mvb12ba ENSDARG00000091619 18 1 - - - 1.000 - - - - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
74. crygmxl1 ENSDARG00000018797 7 1 - - - 1.000 - - - - - crystallin, gamma MX, like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-392]
75. tbkbp1 ENSDARG00000061473 24 1 1.000 - - - - - - - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
76. si:ch211-239f4.4 si:ch211-239f4.4 12 1 1.000 - - - - - - - -
77. myrip ENSDARG00000038814 103 1 1.000 - - - - - - - - myosin VIIA and Rab interacting protein [Source:ZFIN;Acc:ZDB-GENE-080123-1]
78. PTCHD2 PTCHD2 2 1 1.000 - - - - - - - -
79. UNC13A UNC13A 36 1 1.000 - - - - - - - -
80. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1 1.000 - - - - - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
81. sox8 sox8 109 1 - - - 1.000 - - - - -
82. rassf4 ENSDARG00000012460 43 1 1.000 - - - - - - - - Ras association (RalGDS/AF-6) domain family member 4 [Source:ZFIN;Acc:ZDB-GENE-050102-3]
83. si:dkey-24i24.3 ENSDARG00000088452 27 1 1.000 - - - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
84. TTC21A 0 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 21A, transcript variant X4
85. kcnma1b 0 1 - - - 1.000 - - - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1b
86. ENSDARG00000089437 ENSDARG00000089437 0 1 - - - 1.000 - - - - -
87. tmem151a ENSDARG00000079908 2 1 1.000 - - - - - - - - transmembrane protein 151A [Source:ZFIN;Acc:ZDB-GENE-091118-118]
88. PLXNA1 PLXNA1 2 1 1.000 - - - - - - - -
89. NPDC1 NPDC1 126 1 1.000 - - - - - - - -
90. si:rp71-36a1.1 ENSDARG00000095295 13 1 - - - 1.000 - - - - - si:rp71-36a1.1 [Source:ZFIN;Acc:ZDB-GENE-050208-407]
91. RP1 ENSDARG00000077687 6 1 1.000 - - - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
92. CU856140.1 CU856140.1 4316 1 - - - 1.000 - - - - -
93. CABZ01053483.1 CABZ01053483.1 5 1 - - - - - - - - 1.000
94. CDH7 16 1 1.000 - - - - - - - - cadherin 7, type 2, transcript variant X1
95. CABZ01074946.1 CABZ01074946.1 119 1 1.000 - - - - - - - -
96. slco4a1 ENSDARG00000075948 74 1 1.000 - - - - - - - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
97. adprhl1 ENSDARG00000041589 34 1 1.000 - - - - - - - - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
98. si:dkey-21o19.6 si:dkey-21o19.6 18 1 1.000 - - - - - - - -
99. BX530409.1 BX530409.1 65 1 1.000 - - - - - - - -
100. BX511182.1 BX511182.1 8 1 - - - 1.000 - - - - -

There are 452 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA