Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for apobec2a

Gene Name Gene ID Reads Annotation
apobec2a ENSDARG00000018881 4790 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]










Genes with expression patterns similar to apobec2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. apobec2a ENSDARG00000018881 4790 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
2. vcl vcl 6667 4.811 0.838 0.897 0.742 0.753 - 0.766 - - 0.815
3. znf106a ENSDARG00000016651 6049 4.651 0.857 0.841 - 0.724 - 0.763 - 0.738 0.728 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
4. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 4.616 0.852 0.806 0.711 0.750 - - - 0.787 0.710 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
5. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 4.576 0.827 0.755 0.709 0.763 - - - 0.812 0.710 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
6. klhl40a ENSDARG00000039052 2537 3.97 0.857 0.875 0.742 - - - - 0.732 0.764 kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
7. IGFN1 IGFN1 5030 3.961 0.782 0.803 - - - 0.774 - 0.863 0.739
8. tnnt3a ENSDARG00000030270 112506 3.816 0.870 - 0.725 0.745 - - - 0.725 0.751 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
9. sucla2 ENSDARG00000005359 5992 3.805 0.782 0.813 0.723 - - - - 0.748 0.739 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
10. tmem38a ENSDARG00000024047 41883 3.329 0.910 - 0.798 0.825 - - - 0.796 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
11. chrna1 ENSDARG00000009021 2931 3.319 0.872 0.871 - 0.711 - - - - 0.865 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
12. mybpc2b ENSDARG00000021265 9618 3.314 0.825 0.888 - 0.761 - - - 0.840 - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
13. fitm1 ENSDARG00000056464 1759 3.295 0.888 0.907 0.757 - - - - 0.743 - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
14. cap2 ENSDARG00000104478 3266 3.29 0.876 0.771 - - - - - 0.868 0.775 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
15. tpma ENSDARG00000033683 752432 3.252 0.825 - 0.753 0.822 - - - 0.852 - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
16. actn3b ENSDARG00000001431 15747 3.228 0.809 0.914 0.702 0.803 - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
17. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 3.223 0.838 0.906 - 0.741 - - - 0.738 - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
18. prx ENSDARG00000017246 6183 3.221 0.808 0.836 - 0.785 - - - - 0.792 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
19. NRAP ENSDARG00000009341 3565 3.206 0.818 0.879 - 0.748 - - - 0.761 - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
20. si:ch211-156j16.1 ENSDARG00000092035 7441 3.187 0.907 - - 0.754 - - - 0.790 0.736 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
21. ryr1b ENSDARG00000023797 5693 3.162 - 0.898 0.740 - - - - 0.812 0.712 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
22. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 3.107 0.805 - 0.746 - - - - 0.736 0.820 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
23. tnni2b.1 ENSDARG00000035958 51597 3.104 0.792 - 0.840 - - - - 0.749 0.723 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
24. txlnba ENSDARG00000020594 9385 3.1 - - 0.740 0.778 - - - 0.832 0.750 taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
25. ckmb ENSDARG00000040565 505935 3.095 0.742 - 0.756 0.807 - - - 0.790 - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
26. tmem161a ENSDARG00000012790 16094 3.092 0.828 - - 0.731 - 0.737 - - 0.796 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
27. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 3.08 0.745 - 0.805 - - - - 0.761 0.769 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
28. jph1b ENSDARG00000038826 7416 3.076 - 0.843 0.745 0.732 - - - 0.756 - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
29. sgcb ENSDARG00000052341 4168 3.073 - 0.880 - - - 0.767 - 0.714 0.712 sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
30. chrnd ENSDARG00000019342 2728 3.071 0.806 0.836 - - 0.714 - - - 0.715 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
31. jph2 ENSDARG00000028625 6706 3.069 0.759 - - 0.827 - - - 0.773 0.710 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
32. zgc:158296 ENSDARG00000070923 3935 3.067 - 0.817 0.728 0.777 - - - - 0.745 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
33. zgc:92518 ENSDARG00000016343 3837 3.067 0.809 - 0.800 0.711 - - - - 0.747 zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
34. MYOM1 MYOM1 3870 3.065 0.819 0.806 0.730 - - - - 0.710 -
35. tnni1al 8272 3.058 0.788 - - 0.764 - - - 0.759 0.747 troponin I, skeletal, slow like, transcript variant X1
36. tnnt2d ENSDARG00000002988 7590 3.037 0.740 0.812 - 0.711 - - - - 0.774 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
37. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 3.027 - 0.763 - 0.701 - - - 0.774 0.789 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
38. klhl31 ENSDARG00000039066 13656 2.994 - - 0.701 0.727 - - - 0.731 0.835 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
39. casq1b ENSDARG00000018105 2643 2.993 0.715 0.860 - 0.709 - - - - 0.709 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
40. si:ch211-226o13.2 84923 2.983 0.701 - - 0.772 - - - 0.776 0.734 si:ch211-226o13.2
41. mdh1b ENSDARG00000018008 3196 2.916 0.736 0.748 - 0.713 - - - - 0.719 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
42. cct5 ENSDARG00000045399 11572 2.619 0.766 0.856 - - - - 0.997 - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
43. grpel2 ENSDARG00000069421 5673 2.569 0.718 0.854 - - - - 0.997 - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
44. txlnbb ENSDARG00000076241 6396 2.565 0.843 0.930 - - - - - - 0.792 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
45. dtnba ENSDARG00000077694 5483 2.565 0.739 0.836 - - - - 0.990 - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
46. SYNPO2L SYNPO2L 6697 2.557 0.774 - - - - - 0.995 - 0.788
47. trim55a ENSDARG00000029596 2858 2.553 0.894 0.911 - - - - - - 0.748 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
48. PTPLA PTPLA 4044 2.523 0.837 0.856 - - - - - 0.830 -
49. AIMP1 ENSDARG00000060036 4136 2.504 0.878 0.874 - - - - - - 0.752 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
50. srl ENSDARG00000104587 11126 2.502 0.798 0.900 - 0.804 - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
51. pygma ENSDARG00000055518 15972 2.501 0.859 0.869 - - - - - 0.773 - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
52. sptb ENSDARG00000030490 7128 2.489 0.845 0.898 - - - - - - 0.746 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
53. DNAJA4 ENSDARG00000051762 5657 2.474 - 0.857 0.752 - - - - 0.865 - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
54. TMPO TMPO 3264 2.474 0.809 0.910 - - - - - 0.755 -
55. lect1 7551 2.473 0.725 0.768 - - - - 0.980 - - leukocyte cell derived chemotaxin 1, transcript variant X1
56. ITGB1BP2 ENSDARG00000030176 2472 2.472 0.850 0.904 - - - - - - 0.718 integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
57. tnnc1b ENSDARG00000037539 13945 2.466 - 0.880 0.763 - - - - - 0.823 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
58. cacng1 cacng1 3118 2.46 0.823 0.887 - - - - - - 0.750
59. xirp2a ENSDARG00000071113 7113 2.458 0.851 0.842 - - - - - - 0.765 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
60. nexn ENSDARG00000057317 10972 2.442 0.891 - 0.735 - - - - - 0.816 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
61. tnnt3b ENSDARG00000068457 101827 2.439 - 0.858 - 0.743 - - - 0.838 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
62. myod1 ENSDARG00000030110 6019 2.434 0.823 0.835 - - - - - - 0.776 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
63. desma ENSDARG00000058656 30292 2.428 0.846 - 0.779 0.803 - - - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
64. rtn2a ENSDARG00000016088 12184 2.427 0.814 - - 0.731 - - - 0.882 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
65. hfe2 4113 2.426 0.870 0.825 - - - - - - 0.731 hemochromatosis type 2
66. stac3 ENSDARG00000098883 1765 2.417 0.887 0.813 0.717 - - - - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
67. C13H10orf71 3489 2.411 0.791 0.905 0.715 - - - - - - chromosome 13 C10orf71 homolog
68. acta1b ENSDARG00000055618 195597 2.41 0.895 - 0.717 - - - - 0.798 - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
69. hspb7 ENSDARG00000104441 1417 2.408 0.822 0.809 - - - 0.777 - - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
70. klhl41b ENSDARG00000006757 10762 2.403 0.858 - 0.776 - - - - - 0.769 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
71. mybpc3 ENSDARG00000011615 7271 2.399 - - - - - 0.774 - 0.813 0.812 myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
72. cfl2 ENSDARG00000014106 8051 2.381 0.782 0.881 - 0.718 - - - - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
73. mylpfb ENSDARG00000002589 70167 2.38 - 0.854 - 0.765 - - - 0.761 - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
74. casq2 ENSDARG00000008982 21802 2.378 0.866 - - 0.733 - - - 0.779 - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
75. myoz1b ENSDARG00000071445 13381 2.377 0.868 - - 0.740 - - - 0.769 - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
76. aldoab ENSDARG00000034470 88942 2.375 0.884 - - 0.755 - - - 0.736 - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
77. atp2a1 ENSDARG00000020574 291561 2.375 0.868 - - 0.751 - - - 0.756 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
78. smtnl1 ENSDARG00000041257 7410 2.373 0.861 - - 0.728 - - - - 0.784 smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
79. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 2.362 0.814 - 0.762 0.786 - - - - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
80. obsl1b ENSDARG00000077388 2511 2.356 0.723 0.860 - - - - - 0.773 - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
81. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 2.353 0.783 0.804 - - - - - 0.766 - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
82. eef2l2 ENSDARG00000035256 6815 2.351 0.873 0.777 - 0.701 - - - - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
83. sar1ab ENSDARG00000033320 3984 2.35 0.826 - - 0.764 - - - 0.760 - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
84. FHOD3_1 FHOD3_1 983 2.347 0.839 0.807 - - - - - 0.701 -
85. ATP5J_2 ATP5J_2 2381 2.342 - 0.768 - - - - - 0.801 0.773
86. rp42-pen rp42-pen 3395 2.339 - 0.857 - 0.759 - - - - 0.723
87. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 2.338 0.821 - - 0.758 - - - 0.759 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
88. pbxip1a ENSDARG00000071015 4960 2.332 0.781 0.833 - 0.718 - - - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
89. pvalb4 ENSDARG00000024433 35736 2.331 0.820 - - 0.787 - - - 0.724 - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
90. CR847973.1 ENSDARG00000115516 8754 2.331 0.786 0.775 - 0.770 - - - - -
91. TENC1 TENC1 1729 2.331 0.811 0.805 - - - - - - 0.715
92. CU633479.5 ENSDARG00000114818 1815 2.327 0.735 0.872 - - - - - - 0.720
93. sdhdb ENSDARG00000030139 9761 2.326 0.824 - - - - - - 0.779 0.723 succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
94. SPEG SPEG 4017 2.321 0.735 - 0.790 0.796 - - - - -
95. golim4b ENSDARG00000014545 628 2.303 0.791 0.776 - - - - - - 0.736 golgi integral membrane protein 4b [Source:ZFIN;Acc:ZDB-GENE-050327-74]
96. mylz3 ENSDARG00000017441 303597 2.301 0.840 - - 0.739 - - - 0.722 - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
97. cacna2d1a ENSDARG00000014804 1924 2.3 0.760 0.757 - - - - - 0.783 - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
98. myl1 ENSDARG00000014196 98943 2.29 0.776 - 0.762 - - - - 0.752 - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
99. ckma ENSDARG00000035327, ENSDARG00000114671 418792 2.285 0.797 - - 0.750 - - - 0.738 - creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
100. nudt3a ENSDARG00000016256 2713 2.281 0.709 0.799 - - - 0.773 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]

There are 1298 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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