Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for apex2

Gene Name Gene ID Reads Annotation
apex2 ENSDARG00000008472 39 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]










Genes with expression patterns similar to apex2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. apex2 ENSDARG00000008472 39 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
2. slc4a4b ENSDARG00000044808 9 2 - 1.000 - - - 1.000 - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
3. heatr1 ENSDARG00000099742 92 1.823 - - - - - 1.000 0.823 - - HEAT repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6378]
4. si:dkey-250k10.4 ENSDARG00000099751 2 1.809 - 0.809 - - - 1.000 - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
5. trim54 ENSDARG00000029907 10 1.809 - 0.809 - - - - 1.000 - - tripartite motif containing 54 [Source:ZFIN;Acc:ZDB-GENE-041014-342]
6. vcpip1 ENSDARG00000060177 56 1.782 - 0.782 - - - 1.000 - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
7. ENSDARG00000086666 ENSDARG00000086666 2159 1.763 - - - - - 1.000 0.763 - -
8. si:ch211-145h19.1 31 1.745 - - - - 0.745 1.000 - - - si:ch211-145h19.1
9. zgc:153921 ENSDARG00000020738, ENSDARG00000038405 34 1.743 - - - - - 1.000 0.743 - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
10. col5a2b ENSDARG00000024847 17 1.743 - - - - - 1.000 0.743 - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
11. mhc1zaa_1 ENSDARG00000092162 27 1.737 - 0.809 - - 0.928 - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
12. MSMP ENSDARG00000105581 254 1.693 - - - - - 0.791 0.902 - - microseminoprotein, prostate associated [Source:HGNC Symbol;Acc:HGNC:29663]
13. pax1b ENSDARG00000073814 105 1.651 - - - - - 0.809 0.842 - - paired box 1b [Source:ZFIN;Acc:ZDB-GENE-060503-372]
14. SLC2A13 SLC2A13 74 1.649 - - - - - 0.870 0.779 - -
15. CU693477.1 CU693477.1 7 1.614 - 0.809 0.805 - - - - - -
16. TMEM136 TMEM136 13 1.608 - - - - 0.865 - 0.743 - -
17. CCDC141 ENSDARG00000095675 94 1.595 - 0.852 - - - - 0.743 - - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
18. si:dkey-29n10.3 si:dkey-29n10.3 66 1.595 - 0.722 - - - 0.873 - - -
19. mir199-2 mir199-2 38 1.589 - 0.809 0.780 - - - - - -
20. si:dkey-22i16.7 ENSDARG00000094910 47 1.577 - - - - 0.834 - 0.743 - - si:dkey-22i16.7 [Source:ZFIN;Acc:ZDB-GENE-090313-259]
21. agtr1b ENSDARG00000045443 232 1.569 - - - - - 0.826 0.743 - - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
22. batf ENSDARG00000011818 2 1.552 - 0.809 - - - - 0.743 - - basic leucine zipper transcription factor, ATF-like [Source:ZFIN;Acc:ZDB-GENE-041014-291]
23. gc3 31 1.548 - 0.809 - - - - - - 0.739 guanylyl cyclase 3, transcript variant X2
24. tmprss15 ENSDARG00000079393 25 1.517 - 0.809 - - 0.708 - - - - transmembrane serine protease 15 [Source:ZFIN;Acc:ZDB-GENE-091204-83]
25. CABZ01065246.2 CABZ01065246.2 45 1.499 - 0.756 - - - - 0.743 - -
26. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.487 - - 0.744 - - - 0.743 - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
27. si:dkey-4i23.5 ENSDARG00000092137 152 1.48 - - 0.729 - - - 0.751 - - si:dkey-4i23.5 [Source:ZFIN;Acc:ZDB-GENE-070912-543]
28. TC2N ENSDARG00000095067 146 1.472 - - - - - 0.718 0.754 - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
29. odf3l2 36 1.46 - 0.710 0.750 - - - - - - outer dense fiber of sperm tails 3-like 2
30. fam45a ENSDARG00000062965, ENSDARG00000115900 14 1.453 - - - - - 0.710 0.743 - - family with sequence similarity 45, member A [Source:ZFIN;Acc:ZDB-GENE-030131-3548]
31. galnt14 ENSDARG00000023448 102 1.445 - - - - 0.742 - 0.703 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [Source:ZFIN;Acc:ZDB-GENE-041014-351]
32. si:ch211-223g7.7 si:ch211-223g7.7 1 1 - - - - - 1.000 - - -
33. setmar ENSDARG00000074836 29 1 - 1.000 - - - - - - - SET domain and mariner transposase fusion gene [Source:ZFIN;Acc:ZDB-GENE-080204-61]
34. si:ch211-122l14.7 ENSDARG00000095576 5 1 - - - - - 1.000 - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
35. napgl napgl 39 1 - - - - - 1.000 - - -
36. fbn1 39 1 - - - - - 1.000 - - - fibrillin 1
37. ZNF337 ZNF337 3 1 - - - - - 1.000 - - -
38. si:ch73-111e15.1 ENSDARG00000008182 2 1 - - - - - 1.000 - - - si:ch73-111e15.1 [Source:ZFIN;Acc:ZDB-GENE-110411-28]
39. hel_dr4 hel_dr4 12 1 - - - - - 1.000 - - -
40. carm1l ENSDARG00000091531 13 1 - - - - - 1.000 - - - coactivator-associated arginine methyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-090312-219]
41. si:dkey-117n7.4 ENSDARG00000092064 22 1 - - - - - 1.000 - - - si:dkey-117n7.4 [Source:ZFIN;Acc:ZDB-GENE-060503-237]
42. si:ch211-173n18.3 ENSDARG00000028478 8 1 - - - - - 1.000 - - - si:ch211-173n18.3 [Source:ZFIN;Acc:ZDB-GENE-120215-62]
43. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - - - 1.000 - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
44. CR318660.3 CR318660.3 0 1 - - - - - 1.000 - - -
45. NPM2 NPM2 41 1 - - - - - 1.000 - - -
46. arhgef19 ENSDARG00000078853 17 1 - - - - - 1.000 - - - Rho guanine nucleotide exchange factor (GEF) 19 [Source:ZFIN;Acc:ZDB-GENE-090313-243]
47. RIC3 ENSDARG00000105549 3 1 - - - - - 1.000 - - - RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
48. CABZ01078520.1 CABZ01078520.1 2 1 - - - - - 1.000 - - -
49. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - 1.000 - - - si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
50. ENDOD1_4 ENDOD1_4 2 1 - - - - - 1.000 - - -
51. si:ch211-207o17.8 si:ch211-207o17.8 1 1 - - - - - 1.000 - - -
52. abcc5 ENSDARG00000061233 60 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-17]
53. si:dkey-43b14.6 si:dkey-43b14.6 20 1 - - - - - 1.000 - - -
54. si:ch211-198c19.1 ENSDARG00000089333 3 1 - - - - - 1.000 - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
55. pi15b ENSDARG00000061292 1 1 - - - - - 1.000 - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
56. tor2a ENSDARG00000100559, ENSDARG00000115324 58 1 - - - - - 1.000 - - - torsin family 2, member A [Source:ZFIN;Acc:ZDB-GENE-050913-60]
57. si:dkey-204f11.49p si:dkey-204f11.49p 97 1 - 1.000 - - - - - - -
58. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 1 - - - - - 1.000 - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
59. si:ch211-132b12.2 ENSDARG00000094946 15 1 - - - - - 1.000 - - - si:ch211-132b12.2 [Source:ZFIN;Acc:ZDB-GENE-050420-178]
60. ifnlr1 ENSDARG00000087131 73 1 - - - - - 1.000 - - - interferon lambda receptor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-5]
61. EGR4_1 EGR4_1 14 1 - - - - - 1.000 - - -
62. si:dkey-250k15.4 ENSDARG00000092169 19 1 - - - - - 1.000 - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
63. CAMSAP2 CAMSAP2 109 1 - - - - - 1.000 - - -
64. ngb ENSDARG00000053475, ENSDARG00000116651 33 1 - - - - - 1.000 - - - neuroglobin [Source:ZFIN;Acc:ZDB-GENE-011102-1]
65. ptpn20 ENSDARG00000075459 1 1 - - - - - 1.000 - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
66. tti2 ENSDARG00000073773 19 1 - - - - - 1.000 - - - TELO2 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-110411-25]
67. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 1 - - - - - 1.000 - - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
68. pth1b ENSDARG00000091961, ENSDARG00000115353 5 1 - - - - - 1.000 - - - parathyroid hormone 1b [Source:ZFIN;Acc:ZDB-GENE-040623-2]
69. si:ch211-173m16.2 ENSDARG00000093284 186 1 - - - - - 1.000 - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
70. pak1_1 ENSDARG00000103959 28 1 - - - - - 1.000 - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
71. CR854899.1 ENSDARG00000102357 8 1 - - - - - 1.000 - - -
72. TRIM14_11 TRIM14_11 2 1 - - - - - 1.000 - - -
73. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - 1.000 - - - si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
74. BX571969.1 BX571969.1 8 1 - - - - - 1.000 - - -
75. mtmr10 ENSDARG00000010601 37 1 - - - - - 1.000 - - - myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52]
76. C12H17orf70 C12H17orf70 25 1 - - - - - 1.000 - - -
77. fbxo43 ENSDARG00000104186 40 1 - - - - - 1.000 - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
78. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - - 1.000 - - -
79. CABZ01036951.1 CABZ01036951.1 71 1 - - - - - 1.000 - - -
80. TMC2 TMC2 5 1 - - - - - 1.000 - - -
81. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
82. zgc:110434 21 1 - - - - - 1.000 - - - zgc:110434
83. si:dkey-26h11.2 ENSDARG00000096458 10 1 - - - - - 1.000 - - - si:dkey-26h11.2 [Source:ZFIN;Acc:ZDB-GENE-120709-94]
84. si:dkey-29f21.5 si:dkey-29f21.5 3 1 - - - - - 1.000 - - -
85. si:ch1073-221c23.2 si:ch1073-221c23.2 17 1 - - - - - 1.000 - - -
86. CREM_1 CREM_1 9 1 - - - - - 1.000 - - -
87. ei24 ENSDARG00000053840 78 1 - - - - - 1.000 - - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
88. fto ENSDARG00000044216 33 1 - 1.000 - - - - - - - fat mass and obesity associated [Source:ZFIN;Acc:ZDB-GENE-061108-1]
89. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 1 - - - - - 1.000 - - - doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
90. or125-4 ENSDARG00000095417 2 1 - - - - - 1.000 - - - odorant receptor, family E, subfamily 125, member 4 [Source:ZFIN;Acc:ZDB-GENE-070806-94]
91. si:dkey-65b12.12 ENSDARG00000094458 26 1 - - - - - - 1.000 - - si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
92. hp ENSDARG00000051890, ENSDARG00000095807 4 1 - - - - - 1.000 - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
93. BX323793.1 ENSDARG00000104134 24 1 - 1.000 - - - - - - - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
94. zgc:195633_1 142 1 - - - - - 1.000 - - - zgc:195633
95. U1_54 U1_54 0 1 - - - - - 1.000 - - -
96. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 1 - - - - - 1.000 - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
97. SNTB2 ENSDARG00000051763 2 1 - - - - - 1.000 - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
98. trim35-36 trim35-36 19 1 - - - - - - 1.000 - -
99. wu:fa26c03 18714 1 - - - - - 1.000 - - - wu:fa26c03
100. KCNJ12 KCNJ12 17 1 - - - - - 1.000 - - -

There are 814 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA