Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for apex2

Gene Name Gene ID Reads Annotation
apex2 ENSDARG00000008472 39 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]










Genes with expression patterns similar to apex2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. apex2 ENSDARG00000008472 39 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
2. slc4a4b ENSDARG00000044808 9 2 - 1.000 - - - 1.000 - - - solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1]
3. heatr1 ENSDARG00000099742 92 1.823 - - - - - 1.000 0.823 - - HEAT repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6378]
4. trim54 ENSDARG00000029907 10 1.809 - 0.809 - - - - 1.000 - - tripartite motif containing 54 [Source:ZFIN;Acc:ZDB-GENE-041014-342]
5. si:dkey-250k10.4 ENSDARG00000099751 2 1.809 - 0.809 - - - 1.000 - - - si:dkey-250k10.4 [Source:ZFIN;Acc:ZDB-GENE-120703-22]
6. vcpip1 ENSDARG00000060177 56 1.782 - 0.782 - - - 1.000 - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
7. ENSDARG00000086666 ENSDARG00000086666 2159 1.763 - - - - - 1.000 0.763 - -
8. si:ch211-145h19.1 31 1.745 - - - - 0.745 1.000 - - - si:ch211-145h19.1
9. zgc:153921 ENSDARG00000020738, ENSDARG00000038405 34 1.743 - - - - - 1.000 0.743 - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
10. col5a2b ENSDARG00000024847 17 1.743 - - - - - 1.000 0.743 - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
11. mhc1zaa_1 ENSDARG00000092162 27 1.737 - 0.809 - - 0.928 - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
12. MSMP ENSDARG00000105581 254 1.693 - - - - - 0.791 0.902 - - microseminoprotein, prostate associated [Source:HGNC Symbol;Acc:HGNC:29663]
13. pax1b ENSDARG00000073814 105 1.651 - - - - - 0.809 0.842 - - paired box 1b [Source:ZFIN;Acc:ZDB-GENE-060503-372]
14. SLC2A13 SLC2A13 74 1.649 - - - - - 0.870 0.779 - -
15. CU693477.1 CU693477.1 7 1.614 - 0.809 0.805 - - - - - -
16. TMEM136 TMEM136 13 1.608 - - - - 0.865 - 0.743 - -
17. si:dkey-29n10.3 si:dkey-29n10.3 66 1.595 - 0.722 - - - 0.873 - - -
18. CCDC141 ENSDARG00000095675 94 1.595 - 0.852 - - - - 0.743 - - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
19. mir199-2 mir199-2 38 1.589 - 0.809 0.780 - - - - - -
20. si:dkey-22i16.7 ENSDARG00000094910 47 1.577 - - - - 0.834 - 0.743 - - si:dkey-22i16.7 [Source:ZFIN;Acc:ZDB-GENE-090313-259]
21. agtr1b ENSDARG00000045443 232 1.569 - - - - - 0.826 0.743 - - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
22. batf ENSDARG00000011818 2 1.552 - 0.809 - - - - 0.743 - - basic leucine zipper transcription factor, ATF-like [Source:ZFIN;Acc:ZDB-GENE-041014-291]
23. gc3 31 1.548 - 0.809 - - - - - - 0.739 guanylyl cyclase 3, transcript variant X2
24. tmprss15 ENSDARG00000079393 25 1.517 - 0.809 - - 0.708 - - - - transmembrane serine protease 15 [Source:ZFIN;Acc:ZDB-GENE-091204-83]
25. CABZ01065246.2 CABZ01065246.2 45 1.499 - 0.756 - - - - 0.743 - -
26. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.487 - - 0.744 - - - 0.743 - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
27. si:dkey-4i23.5 ENSDARG00000092137 152 1.48 - - 0.729 - - - 0.751 - - si:dkey-4i23.5 [Source:ZFIN;Acc:ZDB-GENE-070912-543]
28. TC2N ENSDARG00000095067 146 1.472 - - - - - 0.718 0.754 - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
29. odf3l2 36 1.46 - 0.710 0.750 - - - - - - outer dense fiber of sperm tails 3-like 2
30. fam45a ENSDARG00000062965, ENSDARG00000115900 14 1.453 - - - - - 0.710 0.743 - - family with sequence similarity 45, member A [Source:ZFIN;Acc:ZDB-GENE-030131-3548]
31. galnt14 ENSDARG00000023448 102 1.445 - - - - 0.742 - 0.703 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) [Source:ZFIN;Acc:ZDB-GENE-041014-351]
32. si:ch211-207o17.8 si:ch211-207o17.8 1 1 - - - - - 1.000 - - -
33. ENSDARG00000091642 ENSDARG00000091642 14 1 - - - - - 1.000 - - -
34. si:dkey-204f11.49p si:dkey-204f11.49p 97 1 - 1.000 - - - - - - -
35. BX323793.1 ENSDARG00000104134 24 1 - 1.000 - - - - - - - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
36. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - 1.000 - - - si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
37. ei24 ENSDARG00000053840 78 1 - - - - - 1.000 - - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
38. dnmt3aa ENSDARG00000005394 63 1 - - - - - 1.000 - - - DNA (cytosine-5-)-methyltransferase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-050314-5]
39. si:ch211-173m16.2 ENSDARG00000093284 186 1 - - - - - 1.000 - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
40. zgc:136902 zgc:136902 4 1 - - - - - 1.000 - - -
41. napgl napgl 39 1 - - - - - 1.000 - - -
42. sdhaf1 ENSDARG00000092478 51 1 - - - - - 1.000 - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
43. BX571969.1 BX571969.1 8 1 - - - - - 1.000 - - -
44. BX569793.1 ENSDARG00000096832 0 1 - - - - - 1.000 - - -
45. CAMSAP2 CAMSAP2 109 1 - - - - - 1.000 - - -
46. zeb1a ENSDARG00000016788 48 1 - - - - - 1.000 - - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
47. fto ENSDARG00000044216 33 1 - 1.000 - - - - - - - fat mass and obesity associated [Source:ZFIN;Acc:ZDB-GENE-061108-1]
48. hel_dr4 hel_dr4 12 1 - - - - - 1.000 - - -
49. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 1 - - - - - 1.000 - - - doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
50. si:dkey-117n7.4 ENSDARG00000092064 22 1 - - - - - 1.000 - - - si:dkey-117n7.4 [Source:ZFIN;Acc:ZDB-GENE-060503-237]
51. si:dkey-20j1.5 si:dkey-20j1.5 1 1 - - - - - 1.000 - - -
52. AL928685.1 ENSDARG00000095786 0 1 - - - - - 1.000 - - -
53. TRIM14_11 TRIM14_11 2 1 - - - - - 1.000 - - -
54. CABZ01035647.1 CABZ01035647.1 5 1 - - - - - 1.000 - - -
55. NPM2 NPM2 41 1 - - - - - 1.000 - - -
56. ptpn20 ENSDARG00000075459 1 1 - - - - - 1.000 - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
57. zgc:195633_1 142 1 - - - - - 1.000 - - - zgc:195633
58. il21r il21r 74 1 - - - - - - 1.000 - -
59. adarb1b ENSDARG00000003544 31 1 - - - - - 1.000 - - - adenosine deaminase, RNA-specific, B1b [Source:ZFIN;Acc:ZDB-GENE-030219-15]
60. mtmr10 ENSDARG00000010601 37 1 - - - - - 1.000 - - - myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52]
61. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 1 - - - - - 1.000 - - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
62. abcc5 ENSDARG00000061233 60 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-17]
63. CR847844.3 CR847844.3 1 1 - - - - - 1.000 - - -
64. si:ch211-225h9.2 si:ch211-225h9.2 16 1 - - - - - 1.000 - - -
65. CU896555.1 CU896555.1 27 1 - 1.000 - - - - - - -
66. si:ch211-42i9.10 si:ch211-42i9.10 25 1 - - - - - - 1.000 - -
67. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1 - - - - - 1.000 - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
68. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - 1.000 - - - si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
69. PEG3_34 PEG3_34 0 1 - - - - - 1.000 - - -
70. CABZ01079804.1 ENSDARG00000117619 1 1 - - - - - 1.000 - - -
71. SNTB2 ENSDARG00000051763 2 1 - - - - - 1.000 - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
72. si:ch211-173n18.3 ENSDARG00000028478 8 1 - - - - - 1.000 - - - si:ch211-173n18.3 [Source:ZFIN;Acc:ZDB-GENE-120215-62]
73. ZNF337 ZNF337 3 1 - - - - - 1.000 - - -
74. C12H17orf70 C12H17orf70 25 1 - - - - - 1.000 - - -
75. si:dkey-14o18.1 si:dkey-14o18.1 108 1 - - - - - 1.000 - - -
76. wu:fa26c03 18714 1 - - - - - 1.000 - - - wu:fa26c03
77. ungb ENSDARG00000094922 16 1 - - - - - 1.000 - - - uracil DNA glycosylase b [Source:ZFIN;Acc:ZDB-GENE-070705-360]
78. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - 1.000 - - - si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
79. si:ch211-198c19.1 ENSDARG00000089333 3 1 - - - - - 1.000 - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
80. ENSDARG00000089152 ENSDARG00000089152 12 1 - - - - - 1.000 - - -
81. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 1 - - - - - - 1.000 - - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
82. fbxo36a ENSDARG00000010662, ENSDARG00000109843 13 1 - - - - - 1.000 - - - F-box protein 36a [Source:ZFIN;Acc:ZDB-GENE-060929-986]
83. U1_54 U1_54 0 1 - - - - - 1.000 - - -
84. EGFR_1 EGFR_1 2 1 - - - - - 1.000 - - -
85. gcnt4b ENSDARG00000077550 2 1 - - - - - 1.000 - - - glucosaminyl (N-acetyl) transferase 4, core 2, b [Source:ZFIN;Acc:ZDB-GENE-091118-69]
86. si:dkeyp-87d1.6 si:dkeyp-87d1.6 0 1 - - - - - 1.000 - - -
87. cbx7b ENSDARG00000087181 5 1 - - - - - 1.000 - - - chromobox homolog 7b [Source:ZFIN;Acc:ZDB-GENE-110613-2]
88. esyt1b ENSDARG00000014239 8 1 - - - - - 1.000 - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
89. si:dkey-43b14.6 si:dkey-43b14.6 20 1 - - - - - 1.000 - - -
90. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - - - - - 1.000 - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
91. foxi2 ENSDARG00000069715, ENSDARG00000116791 81 1 - - - - - - 1.000 - - forkhead box I2 [Source:ZFIN;Acc:ZDB-GENE-031126-2]
92. hbaa2 ENSDARG00000069735 10 1 - - - - - 1.000 - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
93. si:ch73-381a20.2 si:ch73-381a20.2 11 1 - - - - - 1.000 - - -
94. si:dkey-118j18.3 si:dkey-118j18.3 4 1 - - - - - 1.000 - - -
95. KCNJ12 KCNJ12 17 1 - - - - - 1.000 - - -
96. BX005421.3 ENSDARG00000114309 7 1 - - - - - 1.000 - - -
97. si:ch73-111e15.1 ENSDARG00000008182 2 1 - - - - - 1.000 - - - si:ch73-111e15.1 [Source:ZFIN;Acc:ZDB-GENE-110411-28]
98. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 - - - - - 1.000 - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
99. si:dkey-26h11.2 ENSDARG00000096458 10 1 - - - - - 1.000 - - - si:dkey-26h11.2 [Source:ZFIN;Acc:ZDB-GENE-120709-94]
100. kcnq2a ENSDARG00000075307 7 1 - - - - - 1.000 - - - potassium voltage-gated channel, KQT-like subfamily, member 2a [Source:ZFIN;Acc:ZDB-GENE-080220-37]

There are 814 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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