Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for apc

Gene Name Gene ID Reads Annotation
apc ENSDARG00000058868 2605 adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]










Genes with expression patterns similar to apc

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. apc ENSDARG00000058868 2605 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
2. lgi1a ENSDARG00000020493 1218 2.473 - - - - 0.973 0.792 - 0.708 - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
3. prmt1 ENSDARG00000010246 11311 2.473 - 0.790 - - - 0.802 - - 0.881 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
4. TUBB8P7_1 TUBB8P7_1 2722 2.464 - - - - 0.968 0.709 - - 0.787
5. zgc:123105 ENSDARG00000003127 3061 2.436 - 0.722 - - 0.958 0.756 - - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
6. pno1 ENSDARG00000008502 4547 2.43 - 0.766 - - 0.900 - 0.764 - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
7. phrf1 ENSDARG00000075252 1982 2.367 - 0.749 - - - - 0.751 - 0.867 PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-030131-624]
8. sncb ENSDARG00000104945 8197 2.322 - - 0.727 - - 0.773 - - 0.822 synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
9. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.875 - - - - 0.951 - - - 0.924 enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
10. CR548630.1 CR548630.1 3301 1.774 - - - - 0.971 0.803 - - -
11. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.769 - - - - 0.958 0.811 - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
12. hey2 ENSDARG00000013441 540 1.769 - - - - 0.971 - 0.798 - - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
13. UBE2QL1 ENSDARG00000079276 3474 1.768 - - - - 0.972 0.796 - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
14. C18H12orf23 C18H12orf23 5362 1.762 - - - - 0.870 - - - 0.892
15. abi1a ENSDARG00000010155 5631 1.757 - - - - 0.876 - - - 0.881 abl-interactor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1701]
16. nefma ENSDARG00000021351 790 1.757 - - - - 0.972 0.785 - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
17. znf865 ENSDARG00000036698 15532 1.75 - - - - 0.904 0.846 - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
18. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 1.747 - - - - 0.967 0.780 - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
19. creg1 ENSDARG00000105154 843 1.742 0.851 - - - - - 0.891 - - cellular repressor of E1A-stimulated genes 1 [Source:ZFIN;Acc:ZDB-GENE-070112-2042]
20. atp6v0cb ENSDARG00000036577 3472 1.739 - - - - 0.951 0.788 - - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
21. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 1.732 - 0.760 - - 0.972 - - - - zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
22. msi1 ENSDARG00000010710 2634 1.714 - - - - 0.884 0.830 - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
23. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.714 - - - - 0.966 0.748 - - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
24. dnajc15 ENSDARG00000038309 1274 1.711 - 0.753 - - 0.958 - - - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
25. wasf3 wasf3 3287 1.709 - - - - - 0.791 - - 0.918
26. kif22 ENSDARG00000102624 3694 1.706 - - - - 0.955 0.751 - - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
27. sf3b2 ENSDARG00000018049 4675 1.705 - - - - 0.907 - 0.798 - - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
28. C24H17orf96 C24H17orf96 1538 1.703 - 0.731 - - 0.972 - - - -
29. larp7 ENSDARG00000017315 1194 1.703 - - - - 0.976 0.727 - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
30. srgap1 srgap1 2320 1.702 - - - - 0.959 0.743 - - -
31. sin3b ENSDARG00000062472 2025 1.701 - - - - 0.973 0.728 - - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
32. mef2cb ENSDARG00000009418 1124 1.7 - 0.815 - - - - - - 0.885 myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
33. marcksa ENSDARG00000004049 2518 1.7 - - - - 0.941 0.759 - - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
34. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.699 - - - - 0.974 - 0.725 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
35. calm1a ENSDARG00000021811 4791 1.689 - - - - 0.861 0.828 - - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
36. tfdp1b ENSDARG00000016304 3071 1.686 - - - - - - 0.757 - 0.929 transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
37. CABZ01081490.1 ENSDARG00000111653 11892 1.674 - - - - 0.927 - - - 0.747
38. hes6 ENSDARG00000019335 4754 1.673 - - - - - 0.779 - - 0.894 hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
39. mrps15 ENSDARG00000109289 3258 1.67 - 0.701 - - 0.969 - - - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
40. nrarpb ENSDARG00000018958 6225 1.67 - - - - 0.894 0.776 - - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
41. cbl ENSDARG00000009958 1321 1.668 - - - - - - 0.740 - 0.928 Cbl proto-oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041114-207]
42. cxcr4b ENSDARG00000041959 2322 1.667 - - - - - 0.746 - - 0.921 chemokine (C-X-C motif), receptor 4b [Source:ZFIN;Acc:ZDB-GENE-010614-1]
43. cmip ENSDARG00000062933 4521 1.666 - 0.730 - - - - - - 0.936 c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
44. slit1a ENSDARG00000044954 3810 1.665 - - - - - 0.742 - - 0.923 slit homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030722-3]
45. supt6h ENSDARG00000006524 3221 1.662 - - - - 0.948 0.714 - - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
46. marcksb ENSDARG00000008803 42949 1.662 - - - - - 0.890 - - 0.772 myristoylated alanine-rich protein kinase C substrate b [Source:ZFIN;Acc:ZDB-GENE-030131-1921]
47. magi1b ENSDARG00000003169 2056 1.661 - - - - - - 0.736 - 0.925 membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
48. EEF1E1 ENSDARG00000071774 3806 1.661 - 0.711 - - - - - - 0.950 eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
49. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 1.654 - - - - - 0.752 - - 0.902 ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
50. rab10 ENSDARG00000046106 15618 1.651 - - - - 0.940 - - - 0.711 RAB10, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040718-304]
51. TRIO TRIO 1601 1.646 - - - - - 0.720 - - 0.926
52. scube2 ENSDARG00000037362 2833 1.645 - - - - 0.930 0.715 - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
53. dusp6 ENSDARG00000070914, ENSDARG00000116888 4473 1.644 - - - - 0.865 - 0.779 - - dual specificity phosphatase 6 [Source:ZFIN;Acc:ZDB-GENE-030613-1]
54. kpna4 ENSDARG00000023190 2505 1.641 - - - 0.707 - - - - 0.934 karyopherin alpha 4 (importin alpha 3) [Source:ZFIN;Acc:ZDB-GENE-030131-5584]
55. KIF20B KIF20B 800 1.64 - 0.738 - - - - - - 0.902
56. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.632 - 0.760 - - - - - - 0.872 paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
57. ube2e2 ENSDARG00000034670 5918 1.625 - - - - 0.841 - 0.784 - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
58. rhot1a ENSDARG00000099996 2059 1.624 - - - - - 0.727 - - 0.897 ras homolog family member T1a [Source:ZFIN;Acc:ZDB-GENE-030131-5354]
59. homer3 homer3 1974 1.62 - 0.709 - - - - - - 0.911
60. ext2 ENSDARG00000056648 1322 1.619 - 0.833 - - - - 0.786 - - exostosin glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041124-3]
61. lrpprc ENSDARG00000043970 3847 1.619 - 0.753 - - 0.866 - - - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
62. brd3b ENSDARG00000100129 6387 1.617 - 0.732 - - 0.885 - - - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
63. cnih cnih 8292 1.615 - 0.807 - - - - - - 0.808
64. ACVR2B 6615 1.615 - 0.766 - - - 0.849 - - - activin A receptor, type IIB
65. ttyh2 ENSDARG00000016934 1868 1.606 - - - - 0.904 0.702 - - - tweety family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-193]
66. ptenb ENSDARG00000056623 5783 1.597 - - - - - 0.757 - - 0.840 phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
67. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.59 - - - - - 0.706 - - 0.884 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
68. rbm4.1 ENSDARG00000036386 625 1.59 - - - - - 0.715 0.875 - - RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
69. tshz1 ENSDARG00000005026 1948 1.589 - - - - - 0.771 0.818 - - teashirt zinc finger homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030820-3]
70. arnt2 ENSDARG00000103697 5731 1.588 - - 0.727 - - 0.861 - - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
71. matn3b ENSDARG00000069265 856 1.588 - 0.715 - - - - - - 0.873 matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
72. hmg20a ENSDARG00000031198 1763 1.585 - - - - 0.876 0.709 - - - high mobility group 20A [Source:ZFIN;Acc:ZDB-GENE-030131-5107]
73. nucks1a ENSDARG00000078473 28285 1.583 - - 0.708 - - 0.875 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
74. AL954697.2 AL954697.2 1809 1.579 - - - - - 0.790 0.789 - -
75. ndufab1b ENSDARG00000014915 12796 1.579 - - - - 0.748 - - - 0.831 NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
76. ptpmt1 ENSDARG00000013860 772 1.577 0.710 0.867 - - - - - - - protein tyrosine phosphatase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-070112-272]
77. si:ch211-51e12.7 ENSDARG00000045914 9598 1.568 - - - - 0.746 - - - 0.822 si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
78. mpnd ENSDARG00000061989 817 1.567 - - - 0.703 - - - - 0.864 MPN domain containing [Source:ZFIN;Acc:ZDB-GENE-060929-1162]
79. her6 ENSDARG00000006514, ENSDARG00000111099 7477 1.565 - 0.727 - - 0.838 - - - - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
80. tll1 ENSDARG00000037429, ENSDARG00000113847 1039 1.563 - - - - - - 0.733 - 0.830 tolloid-like 1 [Source:ZFIN;Acc:ZDB-GENE-041020-1]
81. tmem35 ENSDARG00000052567 5685 1.554 - - - - 0.738 0.816 - - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
82. MAPT MAPT 4680 1.553 - - - - 0.834 - 0.719 - -
83. supt16h ENSDARG00000079949 4755 1.548 - 0.785 - - - - 0.763 - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
84. ankrd10a ENSDARG00000037100 375 1.548 - 0.742 - - - 0.806 - - - ankyrin repeat domain 10a [Source:ZFIN;Acc:ZDB-GENE-040426-700]
85. hmcn2 ENSDARG00000079327, ENSDARG00000086060 1075 1.545 - - - - - - 0.823 - 0.722 hemicentin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9765]
86. tmsb ENSDARG00000054911 6411 1.544 - 0.759 - - - 0.785 - - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
87. rin2 ENSDARG00000074589 445 1.544 - 0.715 - - - - 0.829 - - Ras and Rab interactor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-194]
88. pl10 pl10 10795 1.543 - 0.719 - - - 0.824 - - -
89. ndc80 ENSDARG00000071694 1162 1.542 - - - - - 0.756 0.786 - - NDC80 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-030131-904]
90. chtopa ENSDARG00000057234 3287 1.54 - 0.786 - - - - 0.754 - - chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
91. tns1 tns1 5891 1.54 - 0.701 - - 0.839 - - - -
92. neurog1 ENSDARG00000056130 3924 1.539 - - 0.719 - - 0.820 - - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
93. ache ENSDARG00000031796 1985 1.53 - 0.746 - - - 0.784 - - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
94. limk1b ENSDARG00000003022 172 1.524 - 0.730 - - - - 0.794 - - LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]
95. cbx1b ENSDARG00000054442 1206 1.523 - - - - - 0.798 0.725 - - chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
96. foxp4 ENSDARG00000076120 9458 1.521 - - 0.761 - - 0.760 - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
97. snrpd3l ENSDARG00000076283 7655 1.52 - - - - 0.761 0.759 - - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
98. eif3m ENSDARG00000013931 8117 1.516 - 0.719 - - 0.797 - - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
99. prpf8 ENSDARG00000026180 7026 1.512 - 0.750 - - - - - - 0.762 pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
100. lppr3a lppr3a 1294 1.512 - 0.752 - - - 0.760 - - -

There are 1904 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA